Cow genome map

Conread name: Ova1-OVRM10210C04

Conread position: 1-317
Cow position:
Alignm length: 323
Alignm identity: 212
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 53, 129

Conread position: 1-374
Cow position:
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 19

Conread position: 1-437
Cow position:
Alignm length: 448
Alignm identity: 302
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 119, 95

Conread position: 1-517
Cow position:
Alignm length: 534
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 39

Conread position: 1-670
Cow position:
Alignm length: 694
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 43

Conread position: 1-727
Cow position:
Alignm length: 756
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 128

Conread position: 1-727
Cow position:
Alignm length: 752
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 1-727
Cow position:
Alignm length: 759
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 142

Conread position: 1-734
Cow position:
Alignm length: 773
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 19

Conread position: 3-242
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 59

Conread position: 3-294
Cow position:
Alignm length: 295
Alignm identity: 220
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 115

Conread position: 3-377
Cow position:
Alignm length: 379
Alignm identity: 253
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 23

Conread position: 3-393
Cow position:
Alignm length: 393
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 120

Conread position: 3-418
Cow position:
Alignm length: 421
Alignm identity: 275
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 11, 128

Conread position: 3-418
Cow position:
Alignm length: 421
Alignm identity: 292
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 106, 58

Conread position: 3-623
Cow position:
Alignm length: 644
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 11

Conread position: 3-630
Cow position:
Alignm length: 652
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 11

Conread position: 3-716
Cow position:
Alignm length: 743
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 35

Conread position: 3-727
Cow position:
Alignm length: 758
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 11

Conread position: 3-727
Cow position:
Alignm length: 753
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 11

Conread position: 3-728
Cow position:
Alignm length: 774
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 91

Conread position: 3-734
Cow position:
Alignm length: 757
Alignm identity: 461
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 48

Conread position: 4-235
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 4-317
Cow position:
Alignm length: 318
Alignm identity: 224
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 62, 124

Conread position: 4-343
Cow position:
Alignm length: 346
Alignm identity: 231
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 93

Conread position: 4-344
Cow position:
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 57

Conread position: 4-379
Cow position:
Alignm length: 384
Alignm identity: 266
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 49, 85

Conread position: 4-418
Cow position:
Alignm length: 418
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 57

Conread position: 4-429
Cow position:
Alignm length: 429
Alignm identity: 286
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 225, 17

Conread position: 4-429
Cow position:
Alignm length: 435
Alignm identity: 292
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 152

Conread position: 4-659
Cow position:
Alignm length: 687
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 34

Conread position: 4-674
Cow position:
Alignm length: 695
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 57

Conread position: 4-721
Cow position:
Alignm length: 738
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 80

Conread position: 4-726
Cow position:
Alignm length: 767
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 34

Conread position: 4-726
Cow position:
Alignm length: 747
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 124

Conread position: 4-726
Cow position:
Alignm length: 749
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 34

Conread position: 4-726
Cow position:
Alignm length: 740
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 71

Conread position: 4-726
Cow position:
Alignm length: 736
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 95

Conread position: 4-727
Cow position:
Alignm length: 750
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 34

Conread position: 4-727
Cow position:
Alignm length: 753
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 75

Conread position: 4-727
Cow position:
Alignm length: 752
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 115

Conread position: 4-727
Cow position:
Alignm length: 746
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 34

Conread position: 4-727
Cow position:
Alignm length: 771
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 123

Conread position: 4-727
Cow position:
Alignm length: 753
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 151

Conread position: 4-727
Cow position:
Alignm length: 757
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 124

Conread position: 4-728
Cow position:
Alignm length: 761
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 4-734
Cow position:
Alignm length: 774
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 116

Conread position: 4-734
Cow position:
Alignm length: 760
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 124

Conread position: 5-305
Cow position:
Alignm length: 305
Alignm identity: 210
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 52, 179

Conread position: 5-727
Cow position:
Alignm length: 749
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 34

Conread position: 5-727
Cow position:
Alignm length: 749
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 9

Conread position: 6-712
Cow position:
Alignm length: 735
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 81

Conread position: 7-727
Cow position:
Alignm length: 750
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 31

Conread position: 9-653
Cow position:
Alignm length: 647
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 28

Conread position: 13-379
Cow position:
Alignm length: 376
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 119

Conread position: 14-220
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 24

Conread position: 14-280
Cow position:
Alignm length: 272
Alignm identity: 190
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 24

Conread position: 14-318
Cow position:
Alignm length: 311
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 24

Conread position: 14-329
Cow position:
Alignm length: 322
Alignm identity: 222
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 24

Conread position: 14-418
Cow position:
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 143

Conread position: 14-441
Cow position:
Alignm length: 434
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 51

Conread position: 14-494
Cow position:
Alignm length: 494
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-517
Cow position:
Alignm length: 519
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-517
Cow position:
Alignm length: 519
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-619
Cow position:
Alignm length: 629
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-619
Cow position:
Alignm length: 629
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-652
Cow position:
Alignm length: 662
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-661
Cow position:
Alignm length: 674
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 14

Conread position: 14-674
Cow position:
Alignm length: 687
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-708
Cow position:
Alignm length: 725
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 107

Conread position: 14-712
Cow position:
Alignm length: 731
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 141

Conread position: 14-721
Cow position:
Alignm length: 737
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-721
Cow position:
Alignm length: 737
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-721
Cow position:
Alignm length: 740
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-721
Cow position:
Alignm length: 741
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 62

Conread position: 14-726
Cow position:
Alignm length: 742
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-727
Cow position:
Alignm length: 740
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 114

Conread position: 14-727
Cow position:
Alignm length: 740
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-727
Cow position:
Alignm length: 741
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 131

Conread position: 14-727
Cow position:
Alignm length: 738
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-727
Cow position:
Alignm length: 751
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-727
Cow position:
Alignm length: 741
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 114

Conread position: 14-727
Cow position:
Alignm length: 742
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-727
Cow position:
Alignm length: 742
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-727
Cow position:
Alignm length: 740
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 119

Conread position: 14-727
Cow position:
Alignm length: 743
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-727
Cow position:
Alignm length: 739
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-734
Cow position:
Alignm length: 747
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 15-727
Cow position:
Alignm length: 742
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 23

Conread position: 15-727
Cow position:
Alignm length: 747
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 23

Conread position: 16-344
Cow position:
Alignm length: 336
Alignm identity: 227
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 140

Conread position: 16-547
Cow position:
Alignm length: 560
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 7

Conread position: 16-661
Cow position:
Alignm length: 667
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 16-727
Cow position:
Alignm length: 731
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 16-727
Cow position:
Alignm length: 740
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 16-730
Cow position:
Alignm length: 734
Alignm identity: 430
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 7

Conread position: 17-342
Cow position:
Alignm length: 332
Alignm identity: 232
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 47, 111

Conread position: 17-700
Cow position:
Alignm length: 716
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 33

Conread position: 17-726
Cow position:
Alignm length: 735
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 44

Conread position: 18-727
Cow position:
Alignm length: 747
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 20

Conread position: 19-665
Cow position:
Alignm length: 675
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 26

Conread position: 19-726
Cow position:
Alignm length: 723
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 43

Conread position: 21-317
Cow position:
Alignm length: 308
Alignm identity: 217
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 111, 104

Conread position: 21-712
Cow position:
Alignm length: 719
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 61

Conread position: 21-719
Cow position:
Alignm length: 734
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 139

Conread position: 22-519
Cow position:
Alignm length: 513
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 39

Conread position: 24-422
Cow position:
Alignm length: 409
Alignm identity: 261
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 37

Conread position: 25-317
Cow position:
Alignm length: 299
Alignm identity: 198
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 21

Conread position: 25-726
Cow position:
Alignm length: 728
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 47

Conread position: 41-422
Cow position:
Alignm length: 384
Alignm identity: 262
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 226, 19

Conread position: 50-721
Cow position:
Alignm length: 703
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 8

Conread position: 52-325
Cow position:
Alignm length: 275
Alignm identity: 191
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 255, 30

Conread position: 52-646
Cow position:
Alignm length: 612
Alignm identity: 392
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 249, 13

Conread position: 52-661
Cow position:
Alignm length: 635
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 102

Conread position: 52-727
Cow position:
Alignm length: 712
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 19

Conread position: 52-729
Cow position:
Alignm length: 695
Alignm identity: 443
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 13, 38

Conread position: 55-692
Cow position:
Alignm length: 669
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 431

Conread position: 60-721
Cow position:
Alignm length: 690
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 58

Conread position: 83-327
Cow position:
Alignm length: 248
Alignm identity: 163
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 58, 84

Conread position: 84-711
Cow position:
Alignm length: 653
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 41

Conread position: 87-604
Cow position:
Alignm length: 548
Alignm identity: 363
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 81, 11

Conread position: 91-369
Cow position:
Alignm length: 279
Alignm identity: 157
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 98-712
Cow position:
Alignm length: 640
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 25

Conread position: 136-726
Cow position:
Alignm length: 613
Alignm identity: 389
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 140, 49

Conread position: 138-662
Cow position:
Alignm length: 539
Alignm identity: 338
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 17, 45

Conread position: 147-727
Cow position:
Alignm length: 606
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 38

Conread position: 147-727
Cow position:
Alignm length: 614
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 38

Conread position: 149-686
Cow position:
Alignm length: 562
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 34

Conread position: 171-727
Cow position:
Alignm length: 581
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 12

Conread position: 175-478
Cow position:
Alignm length: 316
Alignm identity: 217
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 132, 15

Conread position: 184-721
Cow position:
Alignm length: 551
Alignm identity: 343
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 6, 286

Conread position: 191-623
Cow position:
Alignm length: 454
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 29

Conread position: 194-641
Cow position:
Alignm length: 468
Alignm identity: 294
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 144

Conread position: 195-727
Cow position:
Alignm length: 565
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 186

Conread position: 214-622
Cow position:
Alignm length: 426
Alignm identity: 282
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 246

Conread position: 215-727
Cow position:
Alignm length: 538
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 173

Conread position: 233-645
Cow position:
Alignm length: 433
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 243

Conread position: 239-727
Cow position:
Alignm length: 518
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 240

Conread position: 247-725
Cow position:
Alignm length: 514
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 27

Conread position: 276-694
Cow position:
Alignm length: 445
Alignm identity: 294
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 19

Conread position: 277-634
Cow position:
Alignm length: 371
Alignm identity: 253
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 34, 111

Conread position: 295-729
Cow position:
Alignm length: 449
Alignm identity: 289
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 36, 21

Conread position: 301-728
Cow position:
Alignm length: 453
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 175

Conread position: 303-647
Cow position:
Alignm length: 364
Alignm identity: 248
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 26, 168

Conread position: 312-621
Cow position:
Alignm length: 329
Alignm identity: 226
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 16, 168

Conread position: 328-727
Cow position:
Alignm length: 421
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 145

Show alignments to all cow chromosomes.