Cow genome map
| Conread name: | Ova1-OVRM10210C04 |
| Conread position: | 1-317 |
| Cow position: | chrX:20018903-20019220 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 53, 129 |
| Conread position: | 1-374 |
| Cow position: | chrX:44388787-44389156 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 1-437 |
| Cow position: | chrX:10385325-10385757 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 302 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 119, 95 |
| Conread position: | 1-517 |
| Cow position: | chrX:37015145-37015663 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 39 |
| Conread position: | 1-670 |
| Cow position: | chrX:6013925-6013265 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 43 |
| Conread position: | 1-727 |
| Cow position: | chrX:3084115-3083368 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 128 |
| Conread position: | 1-727 |
| Cow position: | chrX:18220452-18221187 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 1-727 |
| Cow position: | chrX:27316298-27317042 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 142 |
| Conread position: | 1-734 |
| Cow position: | chrX:20798343-20799085 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 19 |
| Conread position: | 3-242 |
| Cow position: | chrX:22128702-22128479 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 3-294 |
| Cow position: | chrX:13182106-13181837 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 21, 115 |
| Conread position: | 3-377 |
| Cow position: | chrX:18242184-18242539 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 3-393 |
| Cow position: | chrX:15486743-15486374 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 120 |
| Conread position: | 3-418 |
| Cow position: | chrX:30062054-30061659 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 275 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 11, 128 |
| Conread position: | 3-418 |
| Cow position: | chrX:35940235-35939845 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 292 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 106, 58 |
| Conread position: | 3-623 |
| Cow position: | chrX:30201703-30201075 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 3-630 |
| Cow position: | chrX:30012027-30012668 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 3-716 |
| Cow position: | chrX:27425297-27424563 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 3-727 |
| Cow position: | chrX:2561831-2561086 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 3-727 |
| Cow position: | chrX:24324537-24323795 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 3-728 |
| Cow position: | chrX:41887964-41887221 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 91 |
| Conread position: | 3-734 |
| Cow position: | chrX:17609297-17608561 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 461 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 4-235 |
| Cow position: | chrX:8610673-8610448 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 4-317 |
| Cow position: | chrX:16463290-16462980 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 4-343 |
| Cow position: | chrX:5308718-5308394 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 93 |
| Conread position: | 4-344 |
| Cow position: | chrX:26426554-26426226 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 57 |
| Conread position: | 4-379 |
| Cow position: | chrX:21059807-21060167 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 266 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 49, 85 |
| Conread position: | 4-418 |
| Cow position: | chrX:21590021-21590420 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 57 |
| Conread position: | 4-429 |
| Cow position: | chrX:12314723-12314313 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 286 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 225, 17 |
| Conread position: | 4-429 |
| Cow position: | chrX:30138549-30138126 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 50, 152 |
| Conread position: | 4-659 |
| Cow position: | chrX:27083995-27084673 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-674 |
| Cow position: | chrX:21643877-21643199 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 4-721 |
| Cow position: | chrX:27961883-27962585 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 80 |
| Conread position: | 4-726 |
| Cow position: | chrX:12653496-12652737 (view UCSC Genome Browser custom track) |
| Alignm length: | 767 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-726 |
| Cow position: | chrX:14595873-14596613 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 4-726 |
| Cow position: | chrX:18658766-18658039 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-726 |
| Cow position: | chrX:21269010-21268301 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 71 |
| Conread position: | 4-726 |
| Cow position: | chrX:35386167-35385474 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 95 |
| Conread position: | 4-727 |
| Cow position: | chrX:2577454-2578192 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-727 |
| Cow position: | chrX:3467618-3466877 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 75 |
| Conread position: | 4-727 |
| Cow position: | chrX:5322699-5321958 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 115 |
| Conread position: | 4-727 |
| Cow position: | chrX:7031491-7032225 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-727 |
| Cow position: | chrX:8589190-8589952 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 123 |
| Conread position: | 4-727 |
| Cow position: | chrX:11148308-11147563 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 151 |
| Conread position: | 4-727 |
| Cow position: | chrX:17052571-17053321 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 4-728 |
| Cow position: | chrX:28868217-28867475 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 4-734 |
| Cow position: | chrX:4752595-4751836 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 116 |
| Conread position: | 4-734 |
| Cow position: | chrX:24771835-24771085 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 5-305 |
| Cow position: | chrX:1834841-1835138 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 52, 179 |
| Conread position: | 5-727 |
| Cow position: | chrX:14784442-14783710 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 34 |
| Conread position: | 5-727 |
| Cow position: | chrX:15178405-15177666 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 9 |
| Conread position: | 6-712 |
| Cow position: | chrX:39562912-39562198 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 81 |
| Conread position: | 7-727 |
| Cow position: | chrX:35530884-35531625 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 31 |
| Conread position: | 9-653 |
| Cow position: | chrX:5651603-5651000 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 28 |
| Conread position: | 13-379 |
| Cow position: | chrX:46235779-46236144 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 119 |
| Conread position: | 14-220 |
| Cow position: | chrX:5864432-5864636 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-280 |
| Cow position: | chrX:12287365-12287103 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-318 |
| Cow position: | chrX:5335447-5335142 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-329 |
| Cow position: | chrX:12354273-12354588 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-418 |
| Cow position: | chrX:29097234-29097636 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 143 |
| Conread position: | 14-441 |
| Cow position: | chrX:23040085-23039662 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 51 |
| Conread position: | 14-494 |
| Cow position: | chrX:13397181-13396695 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-517 |
| Cow position: | chrX:16811407-16810900 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-517 |
| Cow position: | chrX:18452017-18452528 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-619 |
| Cow position: | chrX:13075658-13075045 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-619 |
| Cow position: | chrX:13096221-13095606 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-652 |
| Cow position: | chrX:29172724-29172076 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-661 |
| Cow position: | chrX:11422909-11423572 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 14-674 |
| Cow position: | chrX:13447789-13447112 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-708 |
| Cow position: | chrX:28521557-28520848 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 107 |
| Conread position: | 14-712 |
| Cow position: | chrX:12343974-12344695 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 141 |
| Conread position: | 14-721 |
| Cow position: | chrX:2815443-2814720 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-721 |
| Cow position: | chrX:2858337-2857614 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-721 |
| Cow position: | chrX:7752938-7753663 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-721 |
| Cow position: | chrX:17477386-17476656 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 62 |
| Conread position: | 14-726 |
| Cow position: | chrX:26399090-26398357 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chrX:674164-673437 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 114 |
| Conread position: | 14-727 |
| Cow position: | chrX:3374870-3374139 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chrX:5356785-5356054 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 131 |
| Conread position: | 14-727 |
| Cow position: | chrX:9009377-9010106 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chrX:15979920-15979180 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chrX:16684799-16684066 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 114 |
| Conread position: | 14-727 |
| Cow position: | chrX:20035364-20034632 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chrX:28586018-28586750 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chrX:29935635-29936368 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 119 |
| Conread position: | 14-727 |
| Cow position: | chrX:32066129-32065399 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chrX:37813190-37813916 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-734 |
| Cow position: | chrX:5282742-5282010 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 15-727 |
| Cow position: | chrX:16362084-16361351 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 15-727 |
| Cow position: | chrX:28757607-28756868 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 16-344 |
| Cow position: | chrX:8962535-8962207 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 50, 140 |
| Conread position: | 16-547 |
| Cow position: | chrX:41102433-41101883 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 7 |
| Conread position: | 16-661 |
| Cow position: | chrX:27619093-27618435 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 16-727 |
| Cow position: | chrX:3420172-3419455 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 16-727 |
| Cow position: | chrX:28506230-28505499 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 16-730 |
| Cow position: | chrX:34219344-34220058 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 430 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 7 |
| Conread position: | 17-342 |
| Cow position: | chrX:30058091-30058412 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 47, 111 |
| Conread position: | 17-700 |
| Cow position: | chrX:26766159-26765454 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 33 |
| Conread position: | 17-726 |
| Cow position: | chrX:27592946-27592220 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 18-727 |
| Cow position: | chrX:15623460-15622726 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 19-665 |
| Cow position: | chrX:30365745-30365098 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 26 |
| Conread position: | 19-726 |
| Cow position: | chrX:41850162-41849460 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 43 |
| Conread position: | 21-317 |
| Cow position: | chrX:15144862-15144564 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 111, 104 |
| Conread position: | 21-712 |
| Cow position: | chrX:17666743-17666041 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 61 |
| Conread position: | 21-719 |
| Cow position: | chrX:20695781-20695060 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 139 |
| Conread position: | 22-519 |
| Cow position: | chrX:15126180-15125684 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 24-422 |
| Cow position: | chrX:20927230-20927627 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 25-317 |
| Cow position: | chrX:45377044-45376754 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 21 |
| Conread position: | 25-726 |
| Cow position: | chrX:31199612-31200326 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 41-422 |
| Cow position: | chrX:24476121-24475762 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 226, 19 |
| Conread position: | 50-721 |
| Cow position: | chrX:7094539-7095232 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 52-325 |
| Cow position: | chrX:12284019-12284281 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 255, 30 |
| Conread position: | 52-646 |
| Cow position: | chrX:38691913-38692493 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 392 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 249, 13 |
| Conread position: | 52-661 |
| Cow position: | chrX:27495789-27496413 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 102 |
| Conread position: | 52-727 |
| Cow position: | chrX:22489234-22489935 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 19 |
| Conread position: | 52-729 |
| Cow position: | chrX:23212952-23212291 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 443 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 55-692 |
| Cow position: | chrX:12667181-12667847 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 431 |
| Conread position: | 60-721 |
| Cow position: | chrX:33715612-33714938 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 58 |
| Conread position: | 83-327 |
| Cow position: | chrX:11740955-11740714 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 58, 84 |
| Conread position: | 84-711 |
| Cow position: | chrX:20333452-20332806 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 41 |
| Conread position: | 87-604 |
| Cow position: | chrX:6249456-6248921 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 363 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 81, 11 |
| Conread position: | 91-369 |
| Cow position: | chrX:23133306-23133579 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 98-712 |
| Cow position: | chrX:6281657-6281030 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 25 |
| Conread position: | 136-726 |
| Cow position: | chrX:16848715-16848125 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 389 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 140, 49 |
| Conread position: | 138-662 |
| Cow position: | chrX:23926463-23925930 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 338 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 147-727 |
| Cow position: | chrX:5393676-5393077 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 38 |
| Conread position: | 147-727 |
| Cow position: | chrX:37850302-37850909 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 38 |
| Conread position: | 149-686 |
| Cow position: | chrX:37957882-37957326 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 34 |
| Conread position: | 171-727 |
| Cow position: | chrX:30436039-30436614 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 12 |
| Conread position: | 175-478 |
| Cow position: | chrX:2977896-2977582 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 184-721 |
| Cow position: | chrX:20184446-20184991 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 343 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 6, 286 |
| Conread position: | 191-623 |
| Cow position: | chrX:28664608-28665057 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 29 |
| Conread position: | 194-641 |
| Cow position: | chrX:17528113-17528575 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 107, 144 |
| Conread position: | 195-727 |
| Cow position: | chrX:22617990-22617428 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 186 |
| Conread position: | 214-622 |
| Cow position: | chrX:12836085-12835670 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 9, 246 |
| Conread position: | 215-727 |
| Cow position: | chrX:29096091-29095556 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 173 |
| Conread position: | 233-645 |
| Cow position: | chrX:42477562-42477140 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 243 |
| Conread position: | 239-727 |
| Cow position: | chrX:1942110-1941594 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 240 |
| Conread position: | 247-725 |
| Cow position: | chrX:22127872-22127364 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 27 |
| Conread position: | 276-694 |
| Cow position: | chrX:36072444-36072008 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 19 |
| Conread position: | 277-634 |
| Cow position: | chrX:3622383-3622751 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 253 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 34, 111 |
| Conread position: | 295-729 |
| Cow position: | chrX:24997677-24997237 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 289 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 301-728 |
| Cow position: | chrX:21791935-21792386 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 175 |
| Conread position: | 303-647 |
| Cow position: | chrX:12463099-12463460 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 26, 168 |
| Conread position: | 312-621 |
| Cow position: | chrX:12354856-12355182 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 16, 168 |
| Conread position: | 328-727 |
| Cow position: | chrX:10530439-10530021 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 145 |
Show alignments to all cow chromosomes.