Cow genome map
Conread name: | Ova1-OVRM10211B02 |
Conread position: | 352-687 |
Cow position: | chr1:85532019-85531669 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 247 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 59, 109 |
Conread position: | 360-734 |
Cow position: | chr1:90607529-90607143 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 368 |
Conread position: | 361-746 |
Cow position: | chr1:67833780-67833388 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 5 |
Conread position: | 364-744 |
Cow position: | chr1:40511670-40511277 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 141 |
Conread position: | 364-746 |
Cow position: | chr1:3384599-3384192 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 135 |
Conread position: | 364-746 |
Cow position: | chr1:29363648-29364043 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 364-746 |
Cow position: | chr1:57135785-57136155 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 255 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 208, 58 |
Conread position: | 364-746 |
Cow position: | chr1:79635634-79635251 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 11 |
Conread position: | 365-736 |
Cow position: | chr1:89733148-89732784 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 251 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 51, 5 |
Conread position: | 365-746 |
Cow position: | chr1:26517534-26517141 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 10 |
Conread position: | 365-746 |
Cow position: | chr1:31364744-31364355 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 140 |
Conread position: | 365-746 |
Cow position: | chr1:33713426-33713829 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 5 |
Conread position: | 365-746 |
Cow position: | chr1:81862627-81862238 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 11 |
Conread position: | 370-687 |
Cow position: | chr1:99018649-99018338 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 220 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 43, 135 |
Conread position: | 370-746 |
Cow position: | chr1:21116482-21116088 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 281 |
Conread position: | 375-722 |
Cow position: | chr1:25551329-25551687 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 352 |
Conread position: | 375-736 |
Cow position: | chr1:33552293-33552667 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 353 |
Conread position: | 375-736 |
Cow position: | chr1:50248335-50247972 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 180 |
Conread position: | 375-736 |
Cow position: | chr1:57364979-57364610 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 84 |
Conread position: | 375-736 |
Cow position: | chr1:68606184-68605809 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 375-741 |
Cow position: | chr1:56142980-56142601 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 353 |
Conread position: | 375-741 |
Cow position: | chr1:62243289-62242910 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 353 |
Conread position: | 375-741 |
Cow position: | chr1:88132140-88132519 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 353 |
Conread position: | 375-742 |
Cow position: | chr1:49972805-49972429 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 136 |
Conread position: | 375-743 |
Cow position: | chr1:17940406-17940026 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 368 |
Conread position: | 375-743 |
Cow position: | chr1:38417498-38417868 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 218 |
Conread position: | 375-745 |
Cow position: | chr1:82654025-82654404 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 93 |
Conread position: | 375-746 |
Cow position: | chr1:5503332-5503712 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 105 |
Conread position: | 375-746 |
Cow position: | chr1:8826419-8826802 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 108 |
Conread position: | 375-746 |
Cow position: | chr1:10723946-10724327 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 209 |
Conread position: | 375-746 |
Cow position: | chr1:17011371-17010990 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 210 |
Conread position: | 375-746 |
Cow position: | chr1:18026395-18025997 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 375-746 |
Cow position: | chr1:18240859-18240485 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 29 |
Conread position: | 375-746 |
Cow position: | chr1:22619290-22618925 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 99 |
Conread position: | 375-746 |
Cow position: | chr1:26584464-26584847 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 302 |
Conread position: | 375-746 |
Cow position: | chr1:29035667-29036044 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 94 |
Conread position: | 375-746 |
Cow position: | chr1:30074239-30074616 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 346 |
Conread position: | 375-746 |
Cow position: | chr1:33897624-33898008 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 375-746 |
Cow position: | chr1:50210478-50210094 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 375-746 |
Cow position: | chr1:53199909-53200292 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 288 |
Conread position: | 375-746 |
Cow position: | chr1:55320708-55320336 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 130 |
Conread position: | 375-746 |
Cow position: | chr1:55777953-55778334 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 302 |
Conread position: | 375-746 |
Cow position: | chr1:56724515-56724892 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 343 |
Conread position: | 375-746 |
Cow position: | chr1:57423468-57423084 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 375-746 |
Cow position: | chr1:62804807-62804428 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 346 |
Conread position: | 375-746 |
Cow position: | chr1:63604407-63604022 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 353 |
Conread position: | 375-746 |
Cow position: | chr1:65387680-65388060 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 136 |
Conread position: | 375-746 |
Cow position: | chr1:67002522-67002901 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 138 |
Conread position: | 375-746 |
Cow position: | chr1:69767944-69768327 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 366 |
Conread position: | 375-746 |
Cow position: | chr1:72082140-72082504 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 85 |
Conread position: | 375-746 |
Cow position: | chr1:72185516-72185133 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 353 |
Conread position: | 375-746 |
Cow position: | chr1:73069698-73069312 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 305 |
Conread position: | 375-746 |
Cow position: | chr1:77923072-77923456 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 375-746 |
Cow position: | chr1:79455589-79455205 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 353 |
Conread position: | 375-746 |
Cow position: | chr1:80357810-80357422 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 375-746 |
Cow position: | chr1:81777791-81778193 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 285 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 48, 146 |
Conread position: | 375-746 |
Cow position: | chr1:82477340-82477724 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 375-746 |
Cow position: | chr1:86546772-86546389 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 375-746 |
Cow position: | chr1:91900390-91900770 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 93 |
Conread position: | 375-746 |
Cow position: | chr1:99914793-99915183 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 327 |
Conread position: | 376-738 |
Cow position: | chr1:93855884-93856252 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 206 |
Conread position: | 376-746 |
Cow position: | chr1:24652639-24653012 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 377-746 |
Cow position: | chr1:82922788-82922415 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 91 |
Conread position: | 378-693 |
Cow position: | chr1:77115300-77114968 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 87 |
Conread position: | 380-743 |
Cow position: | chr1:32566554-32566186 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 206 |
Conread position: | 380-746 |
Cow position: | chr1:24442992-24442613 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 387-746 |
Cow position: | chr1:89769161-89768793 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 113 |
Conread position: | 394-746 |
Cow position: | chr1:12060812-12060460 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 10 |
Conread position: | 415-742 |
Cow position: | chr1:9259899-9260229 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 0 |
Conread position: | 415-742 |
Cow position: | chr1:82565527-82565857 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 300 |
Conread position: | 415-743 |
Cow position: | chr1:39545201-39545532 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 0 |
Conread position: | 415-746 |
Cow position: | chr1:9379103-9378770 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 102 |
Conread position: | 415-746 |
Cow position: | chr1:20830309-20830643 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 0 |
Conread position: | 415-746 |
Cow position: | chr1:21088846-21089179 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 106 |
Conread position: | 415-746 |
Cow position: | chr1:33852683-33853017 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 0 |
Conread position: | 415-746 |
Cow position: | chr1:86508495-86508147 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 417-740 |
Cow position: | chr1:46837043-46837366 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 184 |
Conread position: | 418-716 |
Cow position: | chr1:56164953-56165254 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 108 |
Conread position: | 419-746 |
Cow position: | chr1:59207661-59207331 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 419-746 |
Cow position: | chr1:71561327-71560997 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 434-746 |
Cow position: | chr1:1828870-1828562 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 9 |
Conread position: | 463-746 |
Cow position: | chr1:21592052-21592337 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 131 |
Conread position: | 476-746 |
Cow position: | chr1:18964894-18964621 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 538-708 |
Cow position: | chr1:65021264-65021094 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 135 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 542-743 |
Cow position: | chr1:40966873-40966672 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 153 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 568-746 |
Cow position: | chr1:62921129-62921307 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 143 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 602-746 |
Cow position: | chr1:101012580-101012436 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 121 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 605-746 |
Cow position: | chr1:98617182-98617041 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 113 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 98, 93 |
Conread position: | 617-746 |
Cow position: | chr1:87435865-87435994 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 106 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 623-746 |
Cow position: | chr1:5355311-5355188 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 99 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 627-746 |
Cow position: | chr1:38476937-38477056 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 94 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.