Cow genome map
Conread name: | Ova1-OVRM10211B02 |
Conread position: | 364-608 |
Cow position: | chr11:44252818-44253075 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 189 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 50, 92 |
Conread position: | 364-630 |
Cow position: | chr11:32685905-32686175 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 202 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 50, 179 |
Conread position: | 364-734 |
Cow position: | chr11:19101478-19101096 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 164 |
Conread position: | 364-737 |
Cow position: | chr11:30122830-30122452 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 257 |
Conread position: | 364-746 |
Cow position: | chr11:17547178-17547567 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 149 |
Conread position: | 364-746 |
Cow position: | chr11:44517849-44517456 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 205 |
Conread position: | 365-746 |
Cow position: | chr11:49039360-49038971 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 5 |
Conread position: | 370-589 |
Cow position: | chr11:54216237-54216007 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 176 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 45, 135 |
Conread position: | 370-638 |
Cow position: | chr11:2833349-2833609 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 206 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 41, 136 |
Conread position: | 375-554 |
Cow position: | chr11:4269375-4269183 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 150 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 375-585 |
Cow position: | chr11:28053616-28053393 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 179 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 375-585 |
Cow position: | chr11:44156222-44156013 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 39 |
Conread position: | 375-637 |
Cow position: | chr11:76372971-76372704 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 185 |
Conread position: | 375-640 |
Cow position: | chr11:20511643-20511908 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 168 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 41, 123 |
Conread position: | 375-664 |
Cow position: | chr11:1495007-1494716 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 186 |
Conread position: | 375-736 |
Cow position: | chr11:41169670-41169296 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 352 |
Conread position: | 375-741 |
Cow position: | chr11:71330621-71331004 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 357 |
Conread position: | 375-743 |
Cow position: | chr11:11989159-11989536 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 130 |
Conread position: | 375-744 |
Cow position: | chr11:1489142-1488764 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 152 |
Conread position: | 375-744 |
Cow position: | chr11:17106656-17106274 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 375-745 |
Cow position: | chr11:26073941-26073561 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 291 |
Conread position: | 375-746 |
Cow position: | chr11:2727758-2728129 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 263 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 43, 77 |
Conread position: | 375-746 |
Cow position: | chr11:3494015-3494399 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 375-746 |
Cow position: | chr11:4026582-4026202 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 136 |
Conread position: | 375-746 |
Cow position: | chr11:4062860-4062502 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 83 |
Conread position: | 375-746 |
Cow position: | chr11:9156124-9155748 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 285 |
Conread position: | 375-746 |
Cow position: | chr11:10848478-10848860 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 212 |
Conread position: | 375-746 |
Cow position: | chr11:12357385-12356992 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 375-746 |
Cow position: | chr11:19063046-19062667 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 93 |
Conread position: | 375-746 |
Cow position: | chr11:20506267-20506662 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 127 |
Conread position: | 375-746 |
Cow position: | chr11:20733212-20732824 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 375-746 |
Cow position: | chr11:23249444-23249060 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 336 |
Conread position: | 375-746 |
Cow position: | chr11:23881057-23881431 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 139 |
Conread position: | 375-746 |
Cow position: | chr11:30253260-30253633 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 92 |
Conread position: | 375-746 |
Cow position: | chr11:32452854-32453241 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 375-746 |
Cow position: | chr11:52420429-52420801 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 178 |
Conread position: | 375-746 |
Cow position: | chr11:58135420-58135797 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 273 |
Conread position: | 375-746 |
Cow position: | chr11:63654308-63653924 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 375-746 |
Cow position: | chr11:66730112-66730496 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 130 |
Conread position: | 375-746 |
Cow position: | chr11:67154711-67155087 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 172 |
Conread position: | 375-746 |
Cow position: | chr11:67451519-67451902 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 349 |
Conread position: | 375-746 |
Cow position: | chr11:67845544-67845162 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 113 |
Conread position: | 375-746 |
Cow position: | chr11:87142605-87142991 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 353 |
Conread position: | 377-746 |
Cow position: | chr11:26548553-26548938 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 275 |
Conread position: | 377-746 |
Cow position: | chr11:44582314-44581933 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 350 |
Conread position: | 377-746 |
Cow position: | chr11:72310010-72309630 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 211 |
Conread position: | 378-746 |
Cow position: | chr11:35894877-35894496 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 130 |
Conread position: | 378-746 |
Cow position: | chr11:73462112-73461730 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 250 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 42, 181 |
Conread position: | 380-746 |
Cow position: | chr11:31927184-31927565 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 183 |
Conread position: | 398-746 |
Cow position: | chr11:53430969-53430625 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 340, 9 |
Conread position: | 409-746 |
Cow position: | chr11:26069976-26069632 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 415-722 |
Cow position: | chr11:44049597-44049906 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 199 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 129, 172 |
Conread position: | 415-745 |
Cow position: | chr11:47759204-47758870 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 140 |
Conread position: | 415-746 |
Cow position: | chr11:9733601-9733273 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 85 |
Conread position: | 415-746 |
Cow position: | chr11:21475201-21475530 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 59 |
Conread position: | 415-746 |
Cow position: | chr11:27657509-27657847 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 76 |
Conread position: | 415-746 |
Cow position: | chr11:28228692-28228358 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 0 |
Conread position: | 415-746 |
Cow position: | chr11:50836592-50836258 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 418-746 |
Cow position: | chr11:47738461-47738138 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 217 |
Conread position: | 425-743 |
Cow position: | chr11:17119258-17118936 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 432-746 |
Cow position: | chr11:15986344-15986652 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 152 |
Conread position: | 450-746 |
Cow position: | chr11:73134414-73134712 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 158 |
Conread position: | 489-741 |
Cow position: | chr11:41234164-41234419 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 226 |
Conread position: | 491-746 |
Cow position: | chr11:10956974-10957225 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 145 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 9, 19 |
Conread position: | 498-746 |
Cow position: | chr11:86876725-86876474 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 217 |
Conread position: | 513-746 |
Cow position: | chr11:31863258-31863496 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 181 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 513-746 |
Cow position: | chr11:37802238-37802472 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 174 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 25, 76 |
Conread position: | 595-746 |
Cow position: | chr11:40405794-40405643 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 624-746 |
Cow position: | chr11:47728404-47728282 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.