Cow genome map
| Conread name: | Ova1-OVRM10211B02 |
| Conread position: | 364-743 |
| Cow position: | chr13:34030702-34031071 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 49 |
| Conread position: | 364-746 |
| Cow position: | chr13:3653231-3652832 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 369 |
| Conread position: | 364-746 |
| Cow position: | chr13:5500916-5500522 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 140 |
| Conread position: | 365-554 |
| Cow position: | chr13:23001924-23001727 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 365-572 |
| Cow position: | chr13:30654310-30654084 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 55, 5 |
| Conread position: | 365-746 |
| Cow position: | chr13:678835-679225 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 365-746 |
| Cow position: | chr13:4942469-4942862 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 5 |
| Conread position: | 365-746 |
| Cow position: | chr13:6667049-6666662 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 5 |
| Conread position: | 375-542 |
| Cow position: | chr13:15923286-15923109 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 375-544 |
| Cow position: | chr13:15519432-15519256 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 40, 130 |
| Conread position: | 375-586 |
| Cow position: | chr13:5624899-5624671 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 45, 8 |
| Conread position: | 375-693 |
| Cow position: | chr13:15543634-15543964 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 375-744 |
| Cow position: | chr13:20541167-20540779 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 375-744 |
| Cow position: | chr13:43590422-43590789 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 96 |
| Conread position: | 375-746 |
| Cow position: | chr13:9045861-9046225 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 90 |
| Conread position: | 375-746 |
| Cow position: | chr13:11793985-11793601 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 117 |
| Conread position: | 375-746 |
| Cow position: | chr13:15450029-15449672 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 22 |
| Conread position: | 375-746 |
| Cow position: | chr13:16253424-16253036 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 359 |
| Conread position: | 375-746 |
| Cow position: | chr13:17309564-17309940 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 342 |
| Conread position: | 375-746 |
| Cow position: | chr13:21697357-21697741 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 375-746 |
| Cow position: | chr13:21839100-21838730 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 375-746 |
| Cow position: | chr13:30239411-30239824 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 215 |
| Conread position: | 375-746 |
| Cow position: | chr13:31732800-31732419 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 375-746 |
| Cow position: | chr13:32984251-32983867 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 375-746 |
| Cow position: | chr13:33524858-33524479 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 375-746 |
| Cow position: | chr13:34041241-34040857 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 353 |
| Conread position: | 375-746 |
| Cow position: | chr13:34342999-34343383 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 353 |
| Conread position: | 375-746 |
| Cow position: | chr13:34938537-34938915 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 101 |
| Conread position: | 375-746 |
| Cow position: | chr13:35758379-35758757 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 375-746 |
| Cow position: | chr13:42090599-42090216 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 375-746 |
| Cow position: | chr13:42217589-42217205 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 375-746 |
| Cow position: | chr13:47575180-47575569 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 361 |
| Conread position: | 375-746 |
| Cow position: | chr13:50110546-50110935 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 351 |
| Conread position: | 375-746 |
| Cow position: | chr13:60648709-60648329 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 363 |
| Conread position: | 376-585 |
| Cow position: | chr13:32546486-32546696 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 40, 156 |
| Conread position: | 376-746 |
| Cow position: | chr13:13326023-13326403 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 136 |
| Conread position: | 377-746 |
| Cow position: | chr13:31729798-31729425 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 187 |
| Conread position: | 377-746 |
| Cow position: | chr13:48358737-48359103 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 111 |
| Conread position: | 378-738 |
| Cow position: | chr13:34324483-34324109 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 378-746 |
| Cow position: | chr13:31508006-31508384 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 392-746 |
| Cow position: | chr13:11797596-11797230 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 415-726 |
| Cow position: | chr13:2387662-2387348 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 300 |
| Conread position: | 415-746 |
| Cow position: | chr13:6358267-6358601 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 415-746 |
| Cow position: | chr13:50193253-50192921 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 179 |
| Conread position: | 418-746 |
| Cow position: | chr13:32923986-32923657 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 86 |
| Conread position: | 496-746 |
| Cow position: | chr13:30304419-30304674 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 524-746 |
| Cow position: | chr13:30654178-30653949 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 547-746 |
| Cow position: | chr13:34869250-34869449 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 160 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 127, 131 |
| Conread position: | 579-746 |
| Cow position: | chr13:5624436-5624270 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 627-746 |
| Cow position: | chr13:3760271-3760152 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 85 |
Show alignments to all cow chromosomes.