Cow genome map
Conread name: | Ova1-OVRM10211B02 |
Conread position: | 336-746 |
Cow position: | chr14:17490399-17489988 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 322 |
Conread position: | 362-746 |
Cow position: | chr14:20564659-20564295 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 271 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 49, 106 |
Conread position: | 364-642 |
Cow position: | chr14:50139522-50139816 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 364-735 |
Cow position: | chr14:44775083-44774729 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 270 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 46, 102 |
Conread position: | 364-743 |
Cow position: | chr14:5513888-5514277 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 174 |
Conread position: | 364-743 |
Cow position: | chr14:13834097-13834489 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 190 |
Conread position: | 365-616 |
Cow position: | chr14:44690031-44690287 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 5 |
Conread position: | 365-678 |
Cow position: | chr14:45678121-45677802 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 225 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 45, 5 |
Conread position: | 365-736 |
Cow position: | chr14:191009-191387 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 10 |
Conread position: | 370-669 |
Cow position: | chr14:44227340-44227652 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 225 |
Conread position: | 370-687 |
Cow position: | chr14:47643264-47643584 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 101 |
Conread position: | 375-564 |
Cow position: | chr14:45082024-45082225 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 153 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 41, 108 |
Conread position: | 375-615 |
Cow position: | chr14:50111770-50112025 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 191 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 375-646 |
Cow position: | chr14:16272327-16272043 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 375-736 |
Cow position: | chr14:17000088-16999715 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 138 |
Conread position: | 375-742 |
Cow position: | chr14:7473320-7473700 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 353 |
Conread position: | 375-742 |
Cow position: | chr14:13779920-13780300 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 353 |
Conread position: | 375-743 |
Cow position: | chr14:15274870-15274491 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 200 |
Conread position: | 375-746 |
Cow position: | chr14:1659425-1659807 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 162 |
Conread position: | 375-746 |
Cow position: | chr14:2295241-2295621 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 281 |
Conread position: | 375-746 |
Cow position: | chr14:9046547-9046932 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 375-746 |
Cow position: | chr14:11153181-11152800 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 130 |
Conread position: | 375-746 |
Cow position: | chr14:12124214-12123830 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 375-746 |
Cow position: | chr14:13863128-13862746 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 229 |
Conread position: | 375-746 |
Cow position: | chr14:16918749-16918369 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 316 |
Conread position: | 375-746 |
Cow position: | chr14:19327294-19326910 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 353 |
Conread position: | 375-746 |
Cow position: | chr14:20783436-20783820 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 353 |
Conread position: | 375-746 |
Cow position: | chr14:27978330-27978708 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 344 |
Conread position: | 375-746 |
Cow position: | chr14:32447931-32448306 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 127 |
Conread position: | 375-746 |
Cow position: | chr14:43559205-43559590 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 230 |
Conread position: | 375-746 |
Cow position: | chr14:44380311-44380698 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 236 |
Conread position: | 375-746 |
Cow position: | chr14:45028037-45027650 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 130 |
Conread position: | 375-746 |
Cow position: | chr14:45710757-45710387 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 200 |
Conread position: | 375-746 |
Cow position: | chr14:48601368-48600998 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 102 |
Conread position: | 375-746 |
Cow position: | chr14:48826253-48826627 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 326 |
Conread position: | 377-743 |
Cow position: | chr14:17687468-17687845 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 316 |
Conread position: | 377-746 |
Cow position: | chr14:29775107-29774770 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 378-746 |
Cow position: | chr14:12611398-12611762 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 31 |
Conread position: | 379-746 |
Cow position: | chr14:5074926-5075294 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 215 |
Conread position: | 381-746 |
Cow position: | chr14:46466646-46467009 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 127 |
Conread position: | 407-746 |
Cow position: | chr14:29046662-29046319 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 27 |
Conread position: | 415-746 |
Cow position: | chr14:751585-751917 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 166 |
Conread position: | 415-746 |
Cow position: | chr14:23256345-23256009 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 422-746 |
Cow position: | chr14:16808297-16807970 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 0 |
Conread position: | 444-736 |
Cow position: | chr14:11476240-11475950 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 67 |
Conread position: | 462-746 |
Cow position: | chr14:16342832-16342549 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 43 |
Conread position: | 510-746 |
Cow position: | chr14:30583282-30583048 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 163 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 23, 40 |
Conread position: | 513-746 |
Cow position: | chr14:33392805-33392572 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 140 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 5, 79 |
Conread position: | 624-746 |
Cow position: | chr14:46502932-46503053 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 100, 66 |
Show alignments to all cow chromosomes.