Cow genome map
| Conread name: | Ova1-OVRM10211B02 |
| Conread position: | 354-746 |
| Cow position: | chr16:34530909-34531295 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 363-672 |
| Cow position: | chr16:32937134-32937454 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 272 |
| Conread position: | 364-746 |
| Cow position: | chr16:3330552-3330937 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 150 |
| Conread position: | 365-746 |
| Cow position: | chr16:28158173-28158575 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 375-533 |
| Cow position: | chr16:26105424-26105256 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 375-551 |
| Cow position: | chr16:15477467-15477657 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 375-584 |
| Cow position: | chr16:7464943-7465163 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 40, 130 |
| Conread position: | 375-585 |
| Cow position: | chr16:23251801-23251577 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 375-615 |
| Cow position: | chr16:31591290-31591042 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 45, 108 |
| Conread position: | 375-643 |
| Cow position: | chr16:406413-406132 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 375-689 |
| Cow position: | chr16:49255603-49255282 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 90 |
| Conread position: | 375-722 |
| Cow position: | chr16:837942-838300 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 200 |
| Conread position: | 375-736 |
| Cow position: | chr16:23983924-23984297 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 298 |
| Conread position: | 375-736 |
| Cow position: | chr16:40557312-40556947 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 188 |
| Conread position: | 375-736 |
| Cow position: | chr16:54324712-54324337 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 354 |
| Conread position: | 375-737 |
| Cow position: | chr16:2482509-2482137 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 375-738 |
| Cow position: | chr16:43896636-43896262 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 130 |
| Conread position: | 375-741 |
| Cow position: | chr16:19149962-19149599 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 122 |
| Conread position: | 375-743 |
| Cow position: | chr16:7675825-7675453 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 150 |
| Conread position: | 375-743 |
| Cow position: | chr16:8815477-8815103 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 93 |
| Conread position: | 375-746 |
| Cow position: | chr16:2410310-2409926 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 234 |
| Conread position: | 375-746 |
| Cow position: | chr16:2726588-2726208 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 223 |
| Conread position: | 375-746 |
| Cow position: | chr16:5527761-5527378 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 320 |
| Conread position: | 375-746 |
| Cow position: | chr16:5662463-5662847 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 375-746 |
| Cow position: | chr16:10438883-10439266 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 84 |
| Conread position: | 375-746 |
| Cow position: | chr16:14665185-14664805 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 93 |
| Conread position: | 375-746 |
| Cow position: | chr16:15185702-15186086 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 354 |
| Conread position: | 375-746 |
| Cow position: | chr16:19779024-19778644 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 186 |
| Conread position: | 375-746 |
| Cow position: | chr16:25086242-25086619 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 85 |
| Conread position: | 375-746 |
| Cow position: | chr16:25442255-25442637 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 130 |
| Conread position: | 375-746 |
| Cow position: | chr16:25456853-25456473 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 93 |
| Conread position: | 375-746 |
| Cow position: | chr16:27732758-27732374 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 353 |
| Conread position: | 375-746 |
| Cow position: | chr16:28470446-28470054 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 361 |
| Conread position: | 375-746 |
| Cow position: | chr16:37480232-37479848 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 201 |
| Conread position: | 375-746 |
| Cow position: | chr16:51084779-51085165 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 112 |
| Conread position: | 376-746 |
| Cow position: | chr16:16270505-16270128 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 377-743 |
| Cow position: | chr16:25342598-25342976 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 378-733 |
| Cow position: | chr16:16898082-16898448 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 152 |
| Conread position: | 408-729 |
| Cow position: | chr16:4301532-4301203 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 22 |
| Conread position: | 415-746 |
| Cow position: | chr16:27594181-27594515 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 300 |
| Conread position: | 417-746 |
| Cow position: | chr16:3088524-3088196 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 41 |
| Conread position: | 419-746 |
| Cow position: | chr16:20202651-20202983 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 442-746 |
| Cow position: | chr16:16240581-16240286 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 491-746 |
| Cow position: | chr16:23809111-23809361 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 19 |
| Conread position: | 498-746 |
| Cow position: | chr16:5119262-5119011 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 217 |
| Conread position: | 503-746 |
| Cow position: | chr16:28169559-28169314 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 18 |
| Conread position: | 572-746 |
| Cow position: | chr16:20193338-20193164 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 150, 140 |
| Conread position: | 594-735 |
| Cow position: | chr16:4474751-4474609 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 5, 125 |
Show alignments to all cow chromosomes.