Cow genome map
| Conread name: | Ova1-OVRM10211B02 |
| Conread position: | 360-746 |
| Cow position: | chr17:24028815-24028420 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 364-746 |
| Cow position: | chr17:34157309-34157704 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 365-746 |
| Cow position: | chr17:3655103-3654707 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 365-746 |
| Cow position: | chr17:27793588-27793201 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 10 |
| Conread position: | 366-746 |
| Cow position: | chr17:20080688-20080314 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 97 |
| Conread position: | 370-573 |
| Cow position: | chr17:1881486-1881701 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 53, 135 |
| Conread position: | 370-746 |
| Cow position: | chr17:20086572-20086194 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 98 |
| Conread position: | 375-647 |
| Cow position: | chr17:33284642-33284375 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 125 |
| Conread position: | 375-672 |
| Cow position: | chr17:2174995-2175287 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 180 |
| Conread position: | 375-728 |
| Cow position: | chr17:23038775-23039128 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 61 |
| Conread position: | 375-729 |
| Cow position: | chr17:1704068-1704436 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 351 |
| Conread position: | 375-734 |
| Cow position: | chr17:1786763-1786396 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 121 |
| Conread position: | 375-736 |
| Cow position: | chr17:733146-732771 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 115 |
| Conread position: | 375-741 |
| Cow position: | chr17:4061303-4061679 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 96 |
| Conread position: | 375-742 |
| Cow position: | chr17:9080222-9079842 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 375-746 |
| Cow position: | chr17:2246883-2246504 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 143 |
| Conread position: | 375-746 |
| Cow position: | chr17:3640706-3640323 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 143 |
| Conread position: | 375-746 |
| Cow position: | chr17:5227821-5228204 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 282 |
| Conread position: | 375-746 |
| Cow position: | chr17:6069748-6070125 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 137 |
| Conread position: | 375-746 |
| Cow position: | chr17:6261059-6261441 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 351 |
| Conread position: | 375-746 |
| Cow position: | chr17:11086525-11086145 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 126 |
| Conread position: | 375-746 |
| Cow position: | chr17:15851891-15852275 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 353 |
| Conread position: | 375-746 |
| Cow position: | chr17:22133447-22133848 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 375-746 |
| Cow position: | chr17:28027304-28026922 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 93 |
| Conread position: | 375-746 |
| Cow position: | chr17:39049413-39049797 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 377-746 |
| Cow position: | chr17:15372427-15372794 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 88 |
| Conread position: | 404-746 |
| Cow position: | chr17:2263378-2263721 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 98 |
| Conread position: | 404-746 |
| Cow position: | chr17:20099235-20098895 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 102 |
| Conread position: | 415-746 |
| Cow position: | chr17:182824-183153 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 87 |
| Conread position: | 415-746 |
| Cow position: | chr17:11784106-11784449 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 415-746 |
| Cow position: | chr17:13967175-13967508 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 238 |
| Conread position: | 415-746 |
| Cow position: | chr17:14936722-14936390 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 96 |
| Conread position: | 415-746 |
| Cow position: | chr17:23323203-23322866 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 415-746 |
| Cow position: | chr17:24783410-24783744 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 415-746 |
| Cow position: | chr17:43989752-43990084 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 53 |
| Conread position: | 518-746 |
| Cow position: | chr17:135981-136210 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 26, 60 |
| Conread position: | 520-746 |
| Cow position: | chr17:6121140-6121368 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 547-746 |
| Cow position: | chr17:39823-40022 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 552-746 |
| Cow position: | chr17:17257302-17257108 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 170, 161 |
| Conread position: | 583-746 |
| Cow position: | chr17:20415041-20414878 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 139, 129 |
| Conread position: | 594-746 |
| Cow position: | chr17:19980706-19980554 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 633-746 |
| Cow position: | chr17:45271650-45271537 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.