Cow genome map
| Conread name: | Ova1-OVRM10211B02 |
| Conread position: | 365-742 |
| Cow position: | chr22:3277053-3276664 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 365-746 |
| Cow position: | chr22:522089-521695 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 365-746 |
| Cow position: | chr22:21035086-21034693 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 10 |
| Conread position: | 370-571 |
| Cow position: | chr22:11033420-11033610 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 375-598 |
| Cow position: | chr22:44458262-44458496 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 103 |
| Conread position: | 375-664 |
| Cow position: | chr22:36185070-36185368 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 130 |
| Conread position: | 375-666 |
| Cow position: | chr22:18815052-18814749 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 296 |
| Conread position: | 375-693 |
| Cow position: | chr22:45582231-45582553 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 35, 111 |
| Conread position: | 375-719 |
| Cow position: | chr22:12730383-12730023 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 375-736 |
| Cow position: | chr22:13766679-13767045 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 121 |
| Conread position: | 375-742 |
| Cow position: | chr22:39468201-39467825 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 136 |
| Conread position: | 375-742 |
| Cow position: | chr22:42992489-42992862 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 375-743 |
| Cow position: | chr22:21195184-21194804 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 108 |
| Conread position: | 375-744 |
| Cow position: | chr22:30128899-30129273 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 93 |
| Conread position: | 375-744 |
| Cow position: | chr22:30146548-30146922 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 93 |
| Conread position: | 375-746 |
| Cow position: | chr22:325876-325480 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 347 |
| Conread position: | 375-746 |
| Cow position: | chr22:559392-559012 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 127 |
| Conread position: | 375-746 |
| Cow position: | chr22:1281421-1281038 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 216 |
| Conread position: | 375-746 |
| Cow position: | chr22:1880117-1880501 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 375-746 |
| Cow position: | chr22:3803499-3803877 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 375-746 |
| Cow position: | chr22:8737027-8736653 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 375-746 |
| Cow position: | chr22:11803738-11803356 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 156 |
| Conread position: | 375-746 |
| Cow position: | chr22:15852738-15853119 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 136 |
| Conread position: | 375-746 |
| Cow position: | chr22:16202226-16202609 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 350 |
| Conread position: | 375-746 |
| Cow position: | chr22:17327145-17326761 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 353 |
| Conread position: | 375-746 |
| Cow position: | chr22:18028601-18028966 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 224 |
| Conread position: | 375-746 |
| Cow position: | chr22:19142367-19141991 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 93 |
| Conread position: | 375-746 |
| Cow position: | chr22:20239526-20239142 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 196 |
| Conread position: | 375-746 |
| Cow position: | chr22:27308461-27308081 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 375-746 |
| Cow position: | chr22:31333731-31333352 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 91 |
| Conread position: | 375-746 |
| Cow position: | chr22:34169653-34170032 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 375-746 |
| Cow position: | chr22:35670350-35669974 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 375-746 |
| Cow position: | chr22:37292361-37291981 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 136 |
| Conread position: | 375-746 |
| Cow position: | chr22:44348546-44348171 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 123 |
| Conread position: | 375-746 |
| Cow position: | chr22:44368169-44367785 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 375-746 |
| Cow position: | chr22:44492368-44492745 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 218 |
| Conread position: | 375-746 |
| Cow position: | chr22:46585251-46584872 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 130 |
| Conread position: | 376-744 |
| Cow position: | chr22:10908522-10908142 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 365 |
| Conread position: | 376-746 |
| Cow position: | chr22:296769-297147 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 376-746 |
| Cow position: | chr22:1268439-1268062 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 188 |
| Conread position: | 412-746 |
| Cow position: | chr22:30677354-30677017 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 303 |
| Conread position: | 415-746 |
| Cow position: | chr22:538474-538805 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 28 |
| Conread position: | 415-746 |
| Cow position: | chr22:6022027-6022347 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 42 |
| Conread position: | 415-746 |
| Cow position: | chr22:46580355-46580021 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 422-736 |
| Cow position: | chr22:870287-869979 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 455-746 |
| Cow position: | chr22:23752303-23752012 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 175 |
| Conread position: | 476-744 |
| Cow position: | chr22:2718481-2718208 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 29, 86 |
| Conread position: | 482-738 |
| Cow position: | chr22:1323582-1323839 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 482-746 |
| Cow position: | chr22:32283252-32282985 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 233 |
| Conread position: | 486-746 |
| Cow position: | chr22:34601027-34601284 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 96 |
| Conread position: | 487-743 |
| Cow position: | chr22:42760207-42760455 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 491-746 |
| Cow position: | chr22:5313723-5313985 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 506-740 |
| Cow position: | chr22:15955574-15955337 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 513-746 |
| Cow position: | chr22:8120318-8120085 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 547-746 |
| Cow position: | chr22:29499038-29499237 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-745 |
| Cow position: | chr22:40371573-40371736 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 582-746 |
| Cow position: | chr22:8880630-8880794 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 594-746 |
| Cow position: | chr22:29352918-29353070 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 598-746 |
| Cow position: | chr22:21336503-21336651 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 604-736 |
| Cow position: | chr22:44459207-44459339 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 625-745 |
| Cow position: | chr22:38551445-38551563 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
Show alignments to all cow chromosomes.