Cow genome map
Conread name: | Ova1-OVRM10211B02 |
Conread position: | 364-746 |
Cow position: | chr29:2101150-2101545 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 364 |
Conread position: | 370-717 |
Cow position: | chr29:6213840-6214178 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 238 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 48, 43 |
Conread position: | 374-554 |
Cow position: | chr29:10646929-10646738 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 150 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 52, 106 |
Conread position: | 375-711 |
Cow position: | chr29:27262392-27262041 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 83 |
Conread position: | 375-714 |
Cow position: | chr29:15997328-15996978 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 108 |
Conread position: | 375-730 |
Cow position: | chr29:8664835-8665195 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 108 |
Conread position: | 375-736 |
Cow position: | chr29:2840020-2839647 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 213 |
Conread position: | 375-736 |
Cow position: | chr29:5236343-5236717 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 198 |
Conread position: | 375-736 |
Cow position: | chr29:14587241-14587615 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 353 |
Conread position: | 375-736 |
Cow position: | chr29:19621955-19621576 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 130 |
Conread position: | 375-736 |
Cow position: | chr29:25931204-25930825 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 93 |
Conread position: | 375-745 |
Cow position: | chr29:32558429-32558046 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 350 |
Conread position: | 375-746 |
Cow position: | chr29:409926-409556 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 179 |
Conread position: | 375-746 |
Cow position: | chr29:609322-608942 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 93 |
Conread position: | 375-746 |
Cow position: | chr29:2691485-2691868 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 205 |
Conread position: | 375-746 |
Cow position: | chr29:5958911-5959281 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 50 |
Conread position: | 375-746 |
Cow position: | chr29:6264678-6264294 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 353 |
Conread position: | 375-746 |
Cow position: | chr29:7845714-7846096 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 375-746 |
Cow position: | chr29:13583406-13583787 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 62 |
Conread position: | 375-746 |
Cow position: | chr29:13851551-13851172 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 338 |
Conread position: | 375-746 |
Cow position: | chr29:16023886-16024269 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 116 |
Conread position: | 375-746 |
Cow position: | chr29:19654950-19655324 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 132 |
Conread position: | 375-746 |
Cow position: | chr29:19888910-19889289 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 139 |
Conread position: | 375-746 |
Cow position: | chr29:20252482-20252872 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 93 |
Conread position: | 375-746 |
Cow position: | chr29:21431529-21431146 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 108 |
Conread position: | 375-746 |
Cow position: | chr29:26163512-26163127 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 375-746 |
Cow position: | chr29:27180431-27180047 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 375-746 |
Cow position: | chr29:32287569-32287952 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 141 |
Conread position: | 375-746 |
Cow position: | chr29:32541423-32541800 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 93 |
Conread position: | 375-746 |
Cow position: | chr29:38207341-38206958 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 375-746 |
Cow position: | chr29:38228300-38228683 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 157 |
Conread position: | 375-746 |
Cow position: | chr29:39078389-39078005 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 353 |
Conread position: | 375-746 |
Cow position: | chr29:40501676-40501301 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 93 |
Conread position: | 375-746 |
Cow position: | chr29:45205834-45206236 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 266 |
Conread position: | 376-746 |
Cow position: | chr29:32892115-32892480 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 34 |
Conread position: | 377-741 |
Cow position: | chr29:16345538-16345913 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 95 |
Conread position: | 380-746 |
Cow position: | chr29:43324850-43325222 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 88 |
Conread position: | 394-746 |
Cow position: | chr29:9641439-9641079 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 45 |
Conread position: | 400-746 |
Cow position: | chr29:16172759-16172402 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 208 |
Conread position: | 404-746 |
Cow position: | chr29:13622496-13622152 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 18 |
Conread position: | 409-746 |
Cow position: | chr29:19526921-19526580 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 415-742 |
Cow position: | chr29:36635000-36634681 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 69 |
Conread position: | 415-742 |
Cow position: | chr29:42803768-42804093 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 89 |
Conread position: | 415-746 |
Cow position: | chr29:31182780-31183108 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 0 |
Conread position: | 516-746 |
Cow position: | chr29:27812566-27812789 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 73 |
Conread position: | 578-746 |
Cow position: | chr29:15625183-15625016 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 127 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 585-746 |
Cow position: | chr29:9082340-9082181 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 130 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 595-746 |
Cow position: | chr29:17406680-17406830 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 120 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 129, 29 |
Show alignments to all cow chromosomes.