Cow genome map

Conread name: Ova1-OVRM10211B02

Conread position: 364-746
Cow position: chr29:2101150-2101545 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 364

Conread position: 370-717
Cow position: chr29:6213840-6214178 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 48, 43

Conread position: 374-554
Cow position: chr29:10646929-10646738 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 52, 106

Conread position: 375-711
Cow position: chr29:27262392-27262041 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 83

Conread position: 375-714
Cow position: chr29:15997328-15996978 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 108

Conread position: 375-730
Cow position: chr29:8664835-8665195 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 108

Conread position: 375-736
Cow position: chr29:2840020-2839647 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 213

Conread position: 375-736
Cow position: chr29:5236343-5236717 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 198

Conread position: 375-736
Cow position: chr29:14587241-14587615 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 353

Conread position: 375-736
Cow position: chr29:19621955-19621576 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 130

Conread position: 375-736
Cow position: chr29:25931204-25930825 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 93

Conread position: 375-745
Cow position: chr29:32558429-32558046 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 350

Conread position: 375-746
Cow position: chr29:409926-409556 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 179

Conread position: 375-746
Cow position: chr29:609322-608942 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 93

Conread position: 375-746
Cow position: chr29:2691485-2691868 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 205

Conread position: 375-746
Cow position: chr29:5958911-5959281 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 50

Conread position: 375-746
Cow position: chr29:6264678-6264294 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 353

Conread position: 375-746
Cow position: chr29:7845714-7846096 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 375-746
Cow position: chr29:13583406-13583787 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 62

Conread position: 375-746
Cow position: chr29:13851551-13851172 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 338

Conread position: 375-746
Cow position: chr29:16023886-16024269 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 116

Conread position: 375-746
Cow position: chr29:19654950-19655324 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 132

Conread position: 375-746
Cow position: chr29:19888910-19889289 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 139

Conread position: 375-746
Cow position: chr29:20252482-20252872 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 93

Conread position: 375-746
Cow position: chr29:21431529-21431146 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 108

Conread position: 375-746
Cow position: chr29:26163512-26163127 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 375-746
Cow position: chr29:27180431-27180047 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 375-746
Cow position: chr29:32287569-32287952 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 141

Conread position: 375-746
Cow position: chr29:32541423-32541800 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 93

Conread position: 375-746
Cow position: chr29:38207341-38206958 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 375-746
Cow position: chr29:38228300-38228683 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 157

Conread position: 375-746
Cow position: chr29:39078389-39078005 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 353

Conread position: 375-746
Cow position: chr29:40501676-40501301 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 93

Conread position: 375-746
Cow position: chr29:45205834-45206236 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 266

Conread position: 376-746
Cow position: chr29:32892115-32892480 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 34

Conread position: 377-741
Cow position: chr29:16345538-16345913 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 95

Conread position: 380-746
Cow position: chr29:43324850-43325222 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 88

Conread position: 394-746
Cow position: chr29:9641439-9641079 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 45

Conread position: 400-746
Cow position: chr29:16172759-16172402 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 208

Conread position: 404-746
Cow position: chr29:13622496-13622152 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 18

Conread position: 409-746
Cow position: chr29:19526921-19526580 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 415-742
Cow position: chr29:36635000-36634681 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 69

Conread position: 415-742
Cow position: chr29:42803768-42804093 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 89

Conread position: 415-746
Cow position: chr29:31182780-31183108 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 516-746
Cow position: chr29:27812566-27812789 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 73

Conread position: 578-746
Cow position: chr29:15625183-15625016 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 585-746
Cow position: chr29:9082340-9082181 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 18, 0

Conread position: 595-746
Cow position: chr29:17406680-17406830 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 29

Show alignments to all cow chromosomes.