Cow genome map
| Conread name: | Ova1-OVRM10211B02 |
| Conread position: | 364-746 |
| Cow position: | chr3:19879872-19880266 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 11 |
| Conread position: | 365-568 |
| Cow position: | chr3:59862606-59862816 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 365-742 |
| Cow position: | chr3:24644453-24644831 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 5 |
| Conread position: | 365-745 |
| Cow position: | chr3:66889738-66889349 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 365-746 |
| Cow position: | chr3:31416249-31416638 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 5 |
| Conread position: | 370-738 |
| Cow position: | chr3:46503790-46504163 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 138 |
| Conread position: | 370-746 |
| Cow position: | chr3:24444840-24444479 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 45, 133 |
| Conread position: | 375-518 |
| Cow position: | chr3:15720949-15721100 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 375-550 |
| Cow position: | chr3:24588226-24588042 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 36, 157 |
| Conread position: | 375-565 |
| Cow position: | chr3:2509802-2509601 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 38, 92 |
| Conread position: | 375-598 |
| Cow position: | chr3:38867555-38867791 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 375-716 |
| Cow position: | chr3:47080172-47079818 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 375-732 |
| Cow position: | chr3:5884773-5885136 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 126 |
| Conread position: | 375-741 |
| Cow position: | chr3:40824630-40825008 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 272 |
| Conread position: | 375-744 |
| Cow position: | chr3:2854203-2853832 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 274 |
| Conread position: | 375-746 |
| Cow position: | chr3:3524262-3524633 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 126 |
| Conread position: | 375-746 |
| Cow position: | chr3:3840271-3839896 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 34 |
| Conread position: | 375-746 |
| Cow position: | chr3:5952943-5952565 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 116 |
| Conread position: | 375-746 |
| Cow position: | chr3:6687036-6687409 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 218 |
| Conread position: | 375-746 |
| Cow position: | chr3:6783605-6783990 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 351 |
| Conread position: | 375-746 |
| Cow position: | chr3:6876936-6876566 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 91 |
| Conread position: | 375-746 |
| Cow position: | chr3:15054456-15054083 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 90 |
| Conread position: | 375-746 |
| Cow position: | chr3:18462594-18462224 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 135 |
| Conread position: | 375-746 |
| Cow position: | chr3:18860655-18861039 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 375-746 |
| Cow position: | chr3:19755698-19755342 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 42 |
| Conread position: | 375-746 |
| Cow position: | chr3:20382266-20382657 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 344 |
| Conread position: | 375-746 |
| Cow position: | chr3:21181455-21181076 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 141 |
| Conread position: | 375-746 |
| Cow position: | chr3:23206633-23206252 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 83 |
| Conread position: | 375-746 |
| Cow position: | chr3:29575886-29575502 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 375-746 |
| Cow position: | chr3:30315787-30316168 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 105 |
| Conread position: | 375-746 |
| Cow position: | chr3:36877414-36877039 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 207 |
| Conread position: | 375-746 |
| Cow position: | chr3:37970284-37970668 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 375-746 |
| Cow position: | chr3:42448354-42448737 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 375-746 |
| Cow position: | chr3:46860052-46859672 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 140 |
| Conread position: | 375-746 |
| Cow position: | chr3:48058123-48057739 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 353 |
| Conread position: | 375-746 |
| Cow position: | chr3:49136327-49135943 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 355 |
| Conread position: | 375-746 |
| Cow position: | chr3:49543966-49543590 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 122 |
| Conread position: | 375-746 |
| Cow position: | chr3:51364548-51364167 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 144 |
| Conread position: | 375-746 |
| Cow position: | chr3:53516842-53517231 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 93 |
| Conread position: | 375-746 |
| Cow position: | chr3:56146541-56146926 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 375-746 |
| Cow position: | chr3:56327353-56327729 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 375-746 |
| Cow position: | chr3:58948777-58949150 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 120 |
| Conread position: | 375-746 |
| Cow position: | chr3:64026897-64026516 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 270 |
| Conread position: | 375-746 |
| Cow position: | chr3:72631304-72631678 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 130 |
| Conread position: | 377-746 |
| Cow position: | chr3:18812738-18813122 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 351 |
| Conread position: | 377-746 |
| Cow position: | chr3:57483483-57483104 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 128 |
| Conread position: | 378-746 |
| Cow position: | chr3:63241002-63240622 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 332 |
| Conread position: | 379-742 |
| Cow position: | chr3:40338907-40338530 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 347 |
| Conread position: | 379-746 |
| Cow position: | chr3:4287331-4287708 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 224 |
| Conread position: | 379-746 |
| Cow position: | chr3:50916586-50916959 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 125 |
| Conread position: | 380-693 |
| Cow position: | chr3:72671285-72670972 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 100 |
| Conread position: | 380-741 |
| Cow position: | chr3:47087544-47087893 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 140 |
| Conread position: | 394-736 |
| Cow position: | chr3:56100414-56100078 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 79 |
| Conread position: | 400-746 |
| Cow position: | chr3:16224156-16224507 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 105 |
| Conread position: | 403-746 |
| Cow position: | chr3:2918744-2919086 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 404-746 |
| Cow position: | chr3:1742607-1742953 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 312 |
| Conread position: | 407-736 |
| Cow position: | chr3:29579908-29580221 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 146 |
| Conread position: | 412-746 |
| Cow position: | chr3:44925347-44925684 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 415-708 |
| Cow position: | chr3:27919715-27920011 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 415-746 |
| Cow position: | chr3:2870076-2870410 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 415-746 |
| Cow position: | chr3:7157432-7157097 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 415-746 |
| Cow position: | chr3:30617632-30617302 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 211 |
| Conread position: | 415-746 |
| Cow position: | chr3:32200308-32200638 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 86 |
| Conread position: | 415-746 |
| Cow position: | chr3:34506056-34505731 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 415-746 |
| Cow position: | chr3:36863170-36862836 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 415-746 |
| Cow position: | chr3:45034027-45034361 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 300 |
| Conread position: | 416-745 |
| Cow position: | chr3:2906480-2906136 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 74 |
| Conread position: | 418-746 |
| Cow position: | chr3:29329999-29329668 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 419-746 |
| Cow position: | chr3:19799880-19799557 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 419-746 |
| Cow position: | chr3:68872463-68872133 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 419-746 |
| Cow position: | chr3:68891278-68890949 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 295 |
| Conread position: | 492-741 |
| Cow position: | chr3:48229149-48228899 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 211 |
| Conread position: | 515-746 |
| Cow position: | chr3:64651998-64652230 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 29, 65 |
| Conread position: | 528-746 |
| Cow position: | chr3:51857290-51857069 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 594-746 |
| Cow position: | chr3:58784686-58784534 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 128, 118 |
| Conread position: | 605-736 |
| Cow position: | chr3:38868068-38868199 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 119, 113 |
Show alignments to all cow chromosomes.