Cow genome map
| Conread name: | Ova1-OVRM10211B02 |
| Conread position: | 363-746 |
| Cow position: | chr4:60263125-60262742 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 130 |
| Conread position: | 365-735 |
| Cow position: | chr4:34178195-34177835 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 5 |
| Conread position: | 365-741 |
| Cow position: | chr4:12588363-12588747 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 145 |
| Conread position: | 365-746 |
| Cow position: | chr4:46200679-46200306 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 370-746 |
| Cow position: | chr4:33596569-33596943 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 99 |
| Conread position: | 375-734 |
| Cow position: | chr4:26876732-26876375 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 89 |
| Conread position: | 375-741 |
| Cow position: | chr4:17924920-17924541 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 375-741 |
| Cow position: | chr4:67682238-67682617 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 353 |
| Conread position: | 375-742 |
| Cow position: | chr4:13494371-13494753 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 136 |
| Conread position: | 375-743 |
| Cow position: | chr4:19005272-19004909 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 140 |
| Conread position: | 375-745 |
| Cow position: | chr4:9847167-9846783 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 375-746 |
| Cow position: | chr4:99177-98793 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 331 |
| Conread position: | 375-746 |
| Cow position: | chr4:160201-160582 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 136 |
| Conread position: | 375-746 |
| Cow position: | chr4:356949-357330 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 170 |
| Conread position: | 375-746 |
| Cow position: | chr4:1929594-1929217 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 179 |
| Conread position: | 375-746 |
| Cow position: | chr4:1952524-1952142 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 118 |
| Conread position: | 375-746 |
| Cow position: | chr4:3126851-3127236 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 375-746 |
| Cow position: | chr4:5443785-5443400 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 295 |
| Conread position: | 375-746 |
| Cow position: | chr4:6865461-6865083 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 93 |
| Conread position: | 375-746 |
| Cow position: | chr4:9355423-9355804 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 123 |
| Conread position: | 375-746 |
| Cow position: | chr4:14386862-14387247 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 375-746 |
| Cow position: | chr4:14755619-14755246 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 117 |
| Conread position: | 375-746 |
| Cow position: | chr4:17502290-17501906 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 375-746 |
| Cow position: | chr4:18423475-18423097 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 186 |
| Conread position: | 375-746 |
| Cow position: | chr4:25598444-25598061 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 353 |
| Conread position: | 375-746 |
| Cow position: | chr4:27334972-27335364 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 360 |
| Conread position: | 375-746 |
| Cow position: | chr4:32213211-32213597 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 375-746 |
| Cow position: | chr4:33494596-33494980 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 353 |
| Conread position: | 375-746 |
| Cow position: | chr4:34183592-34183253 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 375-746 |
| Cow position: | chr4:43882151-43882530 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 145 |
| Conread position: | 375-746 |
| Cow position: | chr4:57985033-57985416 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 296 |
| Conread position: | 376-746 |
| Cow position: | chr4:36897422-36897802 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 92 |
| Conread position: | 378-599 |
| Cow position: | chr4:19742877-19742652 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 91 |
| Conread position: | 378-746 |
| Cow position: | chr4:22027399-22027029 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 379-746 |
| Cow position: | chr4:41955808-41956188 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 379-746 |
| Cow position: | chr4:41959945-41960324 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 290 |
| Conread position: | 393-746 |
| Cow position: | chr4:8702637-8702978 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 94 |
| Conread position: | 415-742 |
| Cow position: | chr4:530496-530839 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 88 |
| Conread position: | 415-746 |
| Cow position: | chr4:604721-605055 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 300 |
| Conread position: | 415-746 |
| Cow position: | chr4:4417152-4417477 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 49 |
| Conread position: | 415-746 |
| Cow position: | chr4:6567475-6567804 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 43 |
| Conread position: | 415-746 |
| Cow position: | chr4:28653401-28653070 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 163 |
| Conread position: | 415-746 |
| Cow position: | chr4:44780129-44779796 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 234 |
| Conread position: | 415-746 |
| Cow position: | chr4:65665303-65664987 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 179 |
| Conread position: | 418-745 |
| Cow position: | chr4:16060373-16060702 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 167 |
| Conread position: | 419-746 |
| Cow position: | chr4:30472308-30472638 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 443-734 |
| Cow position: | chr4:28832840-28833129 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 455-726 |
| Cow position: | chr4:33022505-33022232 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 32 |
| Conread position: | 495-746 |
| Cow position: | chr4:11109897-11109651 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 513-746 |
| Cow position: | chr4:17244296-17244531 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 521-746 |
| Cow position: | chr4:827405-827633 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 534-746 |
| Cow position: | chr4:14139588-14139796 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 556-746 |
| Cow position: | chr4:6267956-6267766 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 167, 162 |
| Conread position: | 569-746 |
| Cow position: | chr4:46666170-46666345 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 594-746 |
| Cow position: | chr4:43867467-43867619 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 109, 104 |
Show alignments to all cow chromosomes.