Cow genome map
| Conread name: | Ova1-OVRM10211B02 |
| Conread position: | 7-362 |
| Cow position: | chr9:15836517-15836876 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 121, 27 |
| Conread position: | 364-589 |
| Cow position: | chr9:60276816-60276579 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 51, 112 |
| Conread position: | 364-612 |
| Cow position: | chr9:59447710-59447967 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 51, 150 |
| Conread position: | 364-746 |
| Cow position: | chr9:8781708-8781333 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 364-746 |
| Cow position: | chr9:27783391-27783780 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 104 |
| Conread position: | 365-746 |
| Cow position: | chr9:779616-779227 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 365-746 |
| Cow position: | chr9:30488805-30489183 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 48, 5 |
| Conread position: | 370-736 |
| Cow position: | chr9:5141907-5142282 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 141 |
| Conread position: | 370-742 |
| Cow position: | chr9:4283180-4283550 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 40, 140 |
| Conread position: | 373-597 |
| Cow position: | chr9:33070263-33070484 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 50, 5 |
| Conread position: | 375-541 |
| Cow position: | chr9:16176962-16177136 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 40, 130 |
| Conread position: | 375-562 |
| Cow position: | chr9:3544093-3544295 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 375-591 |
| Cow position: | chr9:2054132-2054355 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 81, 65 |
| Conread position: | 375-646 |
| Cow position: | chr9:59481586-59481314 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 213 |
| Conread position: | 375-681 |
| Cow position: | chr9:22654790-22655109 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 375-734 |
| Cow position: | chr9:22436179-22436535 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 175 |
| Conread position: | 375-735 |
| Cow position: | chr9:7003941-7004317 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 356 |
| Conread position: | 375-736 |
| Cow position: | chr9:12912990-12913362 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 243 |
| Conread position: | 375-736 |
| Cow position: | chr9:28679186-28679550 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 121 |
| Conread position: | 375-736 |
| Cow position: | chr9:32970155-32970527 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 130 |
| Conread position: | 375-742 |
| Cow position: | chr9:44384474-44384854 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 332 |
| Conread position: | 375-743 |
| Cow position: | chr9:6250512-6250876 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 179 |
| Conread position: | 375-743 |
| Cow position: | chr9:45874737-45875109 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 375-745 |
| Cow position: | chr9:2210971-2211360 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 282 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 47, 245 |
| Conread position: | 375-746 |
| Cow position: | chr9:1995175-1994812 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 179 |
| Conread position: | 375-746 |
| Cow position: | chr9:2212351-2212735 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 375-746 |
| Cow position: | chr9:13474562-13474178 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 130 |
| Conread position: | 375-746 |
| Cow position: | chr9:17063172-17062791 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 349 |
| Conread position: | 375-746 |
| Cow position: | chr9:17304764-17304381 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 268 |
| Conread position: | 375-746 |
| Cow position: | chr9:17901352-17900982 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 375-746 |
| Cow position: | chr9:21410512-21410900 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 218 |
| Conread position: | 375-746 |
| Cow position: | chr9:25034350-25033966 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 350 |
| Conread position: | 375-746 |
| Cow position: | chr9:28023016-28023394 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 84 |
| Conread position: | 375-746 |
| Cow position: | chr9:31065931-31066313 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 375-746 |
| Cow position: | chr9:38677358-38677739 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 137 |
| Conread position: | 375-746 |
| Cow position: | chr9:50094026-50093642 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 375-746 |
| Cow position: | chr9:50698513-50698888 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 125 |
| Conread position: | 375-746 |
| Cow position: | chr9:51211895-51212276 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 301 |
| Conread position: | 375-746 |
| Cow position: | chr9:59537309-59537696 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 356 |
| Conread position: | 376-746 |
| Cow position: | chr9:18508611-18508231 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 348 |
| Conread position: | 376-746 |
| Cow position: | chr9:26567817-26568190 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 378-743 |
| Cow position: | chr9:7060862-7060473 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 379-605 |
| Cow position: | chr9:2497757-2497521 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 43, 127 |
| Conread position: | 380-746 |
| Cow position: | chr9:20939527-20939905 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 312 |
| Conread position: | 404-746 |
| Cow position: | chr9:50791964-50792310 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 18 |
| Conread position: | 407-738 |
| Cow position: | chr9:30673632-30673966 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 415-736 |
| Cow position: | chr9:2679528-2679847 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 202 |
| Conread position: | 415-745 |
| Cow position: | chr9:827844-827515 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 142 |
| Conread position: | 415-746 |
| Cow position: | chr9:3309877-3310209 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 90 |
| Conread position: | 415-746 |
| Cow position: | chr9:25903785-25904116 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 111 |
| Conread position: | 418-746 |
| Cow position: | chr9:2871593-2871927 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 308 |
| Conread position: | 418-746 |
| Cow position: | chr9:64015406-64015077 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 163 |
| Conread position: | 419-746 |
| Cow position: | chr9:47043225-47043555 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 422-746 |
| Cow position: | chr9:27935648-27935975 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 488-746 |
| Cow position: | chr9:10976449-10976710 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 227 |
| Conread position: | 506-746 |
| Cow position: | chr9:28000873-28001119 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 517-746 |
| Cow position: | chr9:29789325-29789093 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 23, 184 |
| Conread position: | 538-746 |
| Cow position: | chr9:30300842-30300634 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 571-746 |
| Cow position: | chr9:56303032-56302857 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 583-746 |
| Cow position: | chr9:6709390-6709553 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 139, 129 |
| Conread position: | 594-746 |
| Cow position: | chr9:3804796-3804944 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 594-746 |
| Cow position: | chr9:29026480-29026330 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 132, 83 |
| Conread position: | 595-746 |
| Cow position: | chr9:43665110-43665262 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 9, 104 |
Show alignments to all cow chromosomes.