Cow genome map

Conread name: Ova1-OVRM10212D05

Conread position: 2-301
Cow position:
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 163

Conread position: 2-305
Cow position:
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 183

Conread position: 3-174
Cow position:
Alignm length: 181
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 156

Conread position: 3-290
Cow position:
Alignm length: 302
Alignm identity: 218
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 14, 180

Conread position: 4-152
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 15

Conread position: 4-158
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 66, 16

Conread position: 4-162
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 4-164
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 4-166
Cow position:
Alignm length: 167
Alignm identity: 143
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 14, 95

Conread position: 4-172
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 18, 159

Conread position: 4-172
Cow position:
Alignm length: 172
Alignm identity: 141
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 82

Conread position: 4-176
Cow position:
Alignm length: 177
Alignm identity: 144
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 18, 61

Conread position: 4-176
Cow position:
Alignm length: 174
Alignm identity: 142
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 13, 29

Conread position: 4-176
Cow position:
Alignm length: 180
Alignm identity: 142
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 14, 109

Conread position: 4-176
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 36

Conread position: 4-181
Cow position:
Alignm length: 193
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 36

Conread position: 4-187
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 14, 97

Conread position: 4-190
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 178

Conread position: 4-196
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 14, 158

Conread position: 4-208
Cow position:
Alignm length: 218
Alignm identity: 173
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 13, 152

Conread position: 4-211
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 39

Conread position: 4-214
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 4-215
Cow position:
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 38

Conread position: 4-215
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 15, 0

Conread position: 4-221
Cow position:
Alignm length: 224
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 4-238
Cow position:
Alignm length: 246
Alignm identity: 190
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 36

Conread position: 4-249
Cow position:
Alignm length: 253
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 153

Conread position: 4-250
Cow position:
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 101

Conread position: 4-254
Cow position:
Alignm length: 265
Alignm identity: 206
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 14, 185

Conread position: 4-255
Cow position:
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 156

Conread position: 4-268
Cow position:
Alignm length: 277
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 4-269
Cow position:
Alignm length: 267
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 40

Conread position: 4-272
Cow position:
Alignm length: 285
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 4-276
Cow position:
Alignm length: 287
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 238

Conread position: 4-287
Cow position:
Alignm length: 291
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 29

Conread position: 4-288
Cow position:
Alignm length: 302
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 287

Conread position: 4-289
Cow position:
Alignm length: 296
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 156

Conread position: 4-289
Cow position:
Alignm length: 302
Alignm identity: 209
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 55, 13

Conread position: 4-289
Cow position:
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 36

Conread position: 4-289
Cow position:
Alignm length: 296
Alignm identity: 214
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 159

Conread position: 4-289
Cow position:
Alignm length: 299
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 139

Conread position: 4-289
Cow position:
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 36

Conread position: 4-289
Cow position:
Alignm length: 297
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 41

Conread position: 4-289
Cow position:
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 4-292
Cow position:
Alignm length: 299
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 144

Conread position: 4-292
Cow position:
Alignm length: 303
Alignm identity: 218
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 14, 284

Conread position: 4-292
Cow position:
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 69

Conread position: 4-292
Cow position:
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 163

Conread position: 4-292
Cow position:
Alignm length: 304
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 38

Conread position: 4-301
Cow position:
Alignm length: 321
Alignm identity: 230
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 291

Conread position: 4-302
Cow position:
Alignm length: 326
Alignm identity: 236
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 149

Conread position: 4-302
Cow position:
Alignm length: 314
Alignm identity: 225
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 14, 282

Conread position: 4-303
Cow position:
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 36

Conread position: 4-303
Cow position:
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 283

Conread position: 4-303
Cow position:
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 279

Conread position: 4-303
Cow position:
Alignm length: 306
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 177

Conread position: 4-303
Cow position:
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 140

Conread position: 4-303
Cow position:
Alignm length: 311
Alignm identity: 227
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 66, 156

Conread position: 4-303
Cow position:
Alignm length: 309
Alignm identity: 232
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 14, 149

Conread position: 4-303
Cow position:
Alignm length: 310
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 156

Conread position: 4-303
Cow position:
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 4-303
Cow position:
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 161

Conread position: 4-304
Cow position:
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 84

Conread position: 4-304
Cow position:
Alignm length: 324
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 227

Conread position: 4-304
Cow position:
Alignm length: 311
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 28

Conread position: 4-308
Cow position:
Alignm length: 306
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 36

Conread position: 4-309
Cow position:
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 230

Conread position: 4-311
Cow position:
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 130

Conread position: 5-233
Cow position:
Alignm length: 240
Alignm identity: 175
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 66, 12

Conread position: 5-303
Cow position:
Alignm length: 313
Alignm identity: 221
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 65, 23

Conread position: 5-303
Cow position:
Alignm length: 312
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 37

Conread position: 7-143
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 33

Conread position: 7-152
Cow position:
Alignm length: 148
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 10, 64

Conread position: 7-160
Cow position:
Alignm length: 164
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 11, 129

Conread position: 7-170
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 7-176
Cow position:
Alignm length: 184
Alignm identity: 143
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 157

Conread position: 7-195
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 7-289
Cow position:
Alignm length: 285
Alignm identity: 206
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 6, 33

Conread position: 7-289
Cow position:
Alignm length: 296
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 25

Conread position: 7-290
Cow position:
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 278

Conread position: 7-303
Cow position:
Alignm length: 299
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 82

Conread position: 8-168
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 8-284
Cow position:
Alignm length: 284
Alignm identity: 184
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 10, 82

Conread position: 9-221
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 28, 16

Conread position: 9-237
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 9, 206

Conread position: 9-240
Cow position:
Alignm length: 240
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 90

Conread position: 9-249
Cow position:
Alignm length: 244
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 118

Conread position: 9-249
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 9, 55

Conread position: 9-254
Cow position:
Alignm length: 250
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 145

Conread position: 9-304
Cow position:
Alignm length: 322
Alignm identity: 227
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 38

Conread position: 9-323
Cow position:
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 274

Conread position: 10-289
Cow position:
Alignm length: 287
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 80

Conread position: 11-303
Cow position:
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 242

Conread position: 11-308
Cow position:
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 71

Conread position: 15-158
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 15-234
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 15-250
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 15-251
Cow position:
Alignm length: 250
Alignm identity: 191
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 41, 0

Conread position: 15-287
Cow position:
Alignm length: 286
Alignm identity: 214
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 54, 184

Conread position: 16-301
Cow position:
Alignm length: 301
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 95

Conread position: 17-291
Cow position:
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 50

Conread position: 17-292
Cow position:
Alignm length: 278
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 15

Conread position: 18-292
Cow position:
Alignm length: 303
Alignm identity: 227
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 136

Conread position: 25-272
Cow position:
Alignm length: 262
Alignm identity: 193
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 51, 87

Conread position: 25-295
Cow position:
Alignm length: 286
Alignm identity: 213
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 33, 179

Conread position: 25-305
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 106

Conread position: 26-268
Cow position:
Alignm length: 250
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 64

Conread position: 33-316
Cow position:
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 131

Conread position: 39-242
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 122

Conread position: 39-292
Cow position:
Alignm length: 280
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 261

Conread position: 39-303
Cow position:
Alignm length: 278
Alignm identity: 205
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 29, 114

Conread position: 40-256
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 29, 0

Conread position: 75-288
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 160-292
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 109, 119

Show alignments to all cow chromosomes.