Cow genome map

Conread name: Ova1-OVRM10212D05

Conread position: 2-174
Cow position: chr10:27749575-27749390 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 2-193
Cow position: chr10:56080273-56080476 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 162

Conread position: 2-196
Cow position: chr10:1423737-1423525 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 16, 167

Conread position: 2-196
Cow position: chr10:64182348-64182144 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 159

Conread position: 2-208
Cow position: chr10:31791361-31791576 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 198

Conread position: 2-238
Cow position: chr10:39268496-39268254 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 182

Conread position: 2-290
Cow position: chr10:48741262-48741558 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 148

Conread position: 3-148
Cow position: chr10:50039296-50039155 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 67

Conread position: 3-169
Cow position: chr10:8760244-8760404 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 3-249
Cow position: chr10:3998799-3998550 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 37

Conread position: 3-251
Cow position: chr10:16986135-16985877 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 3-287
Cow position: chr10:58690788-58690534 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 14, 55

Conread position: 4-145
Cow position: chr10:43508886-43508739 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 14, 39

Conread position: 4-146
Cow position: chr10:36489913-36489762 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 4-154
Cow position: chr10:63883849-63883708 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 67

Conread position: 4-157
Cow position: chr10:54962831-54962988 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 4-158
Cow position: chr10:20997381-20997545 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 143

Conread position: 4-176
Cow position: chr10:34554193-34554375 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 4-177
Cow position: chr10:13391155-13391341 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 36

Conread position: 4-180
Cow position: chr10:15871977-15872153 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 148
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 36

Conread position: 4-180
Cow position: chr10:20505434-20505251 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 142

Conread position: 4-180
Cow position: chr10:60032678-60032866 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 142

Conread position: 4-181
Cow position: chr10:49169158-49169350 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 160

Conread position: 4-186
Cow position: chr10:64285901-64286092 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 12

Conread position: 4-195
Cow position: chr10:53248115-53248315 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 164
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 90

Conread position: 4-196
Cow position: chr10:15462384-15462191 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 13, 29

Conread position: 4-196
Cow position: chr10:29166175-29165969 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 58, 10

Conread position: 4-197
Cow position: chr10:51696637-51696447 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 154
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 13, 36

Conread position: 4-229
Cow position: chr10:6986340-6986108 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 29

Conread position: 4-232
Cow position: chr10:68829385-68829609 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 14, 67

Conread position: 4-235
Cow position: chr10:44783240-44782995 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 4-254
Cow position: chr10:6345972-6345704 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 4-254
Cow position: chr10:40420946-40421208 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 214

Conread position: 4-267
Cow position: chr10:888820-888539 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 14, 146

Conread position: 4-272
Cow position: chr10:47091664-47091932 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 13, 154

Conread position: 4-288
Cow position: chr10:10043201-10043486 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 65, 14

Conread position: 4-289
Cow position: chr10:9445119-9445393 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 29

Conread position: 4-289
Cow position: chr10:19372443-19372721 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 29

Conread position: 4-289
Cow position: chr10:24745021-24744723 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 29

Conread position: 4-289
Cow position: chr10:30523170-30523455 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 68

Conread position: 4-289
Cow position: chr10:32093698-32093395 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 14, 220

Conread position: 4-289
Cow position: chr10:48462443-48462738 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 179

Conread position: 4-290
Cow position: chr10:21462133-21461841 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 281

Conread position: 4-290
Cow position: chr10:26209363-26209645 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 218
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 14, 215

Conread position: 4-290
Cow position: chr10:56475361-56475070 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 277

Conread position: 4-292
Cow position: chr10:6516287-6516587 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 185

Conread position: 4-292
Cow position: chr10:20735596-20735308 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 14

Conread position: 4-292
Cow position: chr10:22616743-22617044 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 285

Conread position: 4-292
Cow position: chr10:32775003-32774715 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 36

Conread position: 4-292
Cow position: chr10:35862330-35862630 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 186

Conread position: 4-292
Cow position: chr10:37528710-37529011 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 285

Conread position: 4-292
Cow position: chr10:50016110-50016390 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 39

Conread position: 4-293
Cow position: chr10:50332479-50332190 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 145

Conread position: 4-301
Cow position: chr10:22321419-22321117 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 149

Conread position: 4-302
Cow position: chr10:28836117-28835823 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 36

Conread position: 4-302
Cow position: chr10:35887508-35887815 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 230
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 14, 153

Conread position: 4-303
Cow position: chr10:5113485-5113176 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 160

Conread position: 4-303
Cow position: chr10:24308020-24308306 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 4-303
Cow position: chr10:24971718-24972007 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 36

Conread position: 4-303
Cow position: chr10:28721681-28721384 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 143

Conread position: 4-303
Cow position: chr10:35904929-35905242 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 286

Conread position: 4-303
Cow position: chr10:40737898-40737594 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 66

Conread position: 4-303
Cow position: chr10:50200609-50200292 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 69

Conread position: 4-304
Cow position: chr10:49569098-49568774 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 296

Conread position: 4-307
Cow position: chr10:20372231-20372531 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 187

Conread position: 4-308
Cow position: chr10:60936840-60936540 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 85

Conread position: 5-272
Cow position: chr10:10753161-10753447 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 6-170
Cow position: chr10:21709003-21709173 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 76, 138

Conread position: 7-156
Cow position: chr10:59151970-59152130 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 90

Conread position: 7-174
Cow position: chr10:37444328-37444501 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 147
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 11, 0

Conread position: 7-218
Cow position: chr10:37014528-37014310 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 116

Conread position: 7-272
Cow position: chr10:19394691-19394962 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 139

Conread position: 7-289
Cow position: chr10:31374203-31374504 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 229
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 18

Conread position: 7-302
Cow position: chr10:59588275-59588579 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 152

Conread position: 7-303
Cow position: chr10:54141784-54141475 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 93

Conread position: 8-289
Cow position: chr10:20294771-20295063 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 246

Conread position: 8-292
Cow position: chr10:32928657-32928368 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 145

Conread position: 8-303
Cow position: chr10:4711523-4711222 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 187

Conread position: 9-176
Cow position: chr10:61305171-61304995 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 9, 145

Conread position: 10-289
Cow position: chr10:24871054-24870766 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 275

Conread position: 11-220
Cow position: chr10:9083186-9082968 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 7, 32

Conread position: 15-173
Cow position: chr10:2185210-2185048 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 61, 17

Conread position: 15-185
Cow position: chr10:40933563-40933381 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 15-271
Cow position: chr10:64961188-64960922 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 184

Conread position: 15-290
Cow position: chr10:14850109-14849836 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 72

Conread position: 15-303
Cow position: chr10:11217497-11217201 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 269

Conread position: 15-303
Cow position: chr10:59247333-59247029 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 42, 256

Conread position: 16-181
Cow position: chr10:34175112-34175288 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 23

Conread position: 16-221
Cow position: chr10:34430337-34430544 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 139

Conread position: 17-303
Cow position: chr10:24763358-24763063 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 18-181
Cow position: chr10:15293155-15292980 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 114

Conread position: 18-289
Cow position: chr10:31005166-31005438 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 162

Conread position: 20-303
Cow position: chr10:41737186-41736894 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 135

Conread position: 24-302
Cow position: chr10:14787669-14787940 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 9, 48

Conread position: 27-303
Cow position: chr10:44681390-44681108 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 216

Conread position: 31-200
Cow position: chr10:55396079-55396249 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 38

Conread position: 31-247
Cow position: chr10:63628071-63627846 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 178
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 33

Conread position: 33-292
Cow position: chr10:47583879-47583610 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 102

Conread position: 39-291
Cow position: chr10:25259889-25259626 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 13, 144

Conread position: 75-288
Cow position: chr10:19490612-19490825 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.