Cow genome map


           Conread name:
           Ova1-OVRM10212D05
        

               Conread position:
               1-137
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-169
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 67
               

               Conread position:
               2-172
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               2-172
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               2-240
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 158
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 210
               

               Conread position:
               4-134
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 74
               

               Conread position:
               4-138
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-152
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               4-163
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               14, 146
               

               Conread position:
               4-168
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-170
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               141
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               4-170
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 98
               

               Conread position:
               4-176
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 138
               

               Conread position:
               4-176
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               4-176
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               4-176
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 144
               

               Conread position:
               4-177
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               81, 17
               

               Conread position:
               4-177
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               4-177
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 122
               

               Conread position:
               4-177
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 181
               

               Conread position:
               4-177
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               54, 97
               

               Conread position:
               4-177
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               4-184
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               4-189
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               4-192
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 128
               

               Conread position:
               4-195
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               4-201
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               17, 161
               

               Conread position:
               4-204
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               4-210
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               69, 153
               

               Conread position:
               4-212
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               172
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               4-218
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               4-218
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               185
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               14, 204
               

               Conread position:
               4-222
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 138
               

               Conread position:
               4-227
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 152
               

               Conread position:
               4-229
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               14, 193
               

               Conread position:
               4-230
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-239
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               14, 135
               

               Conread position:
               4-246
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 183
               

               Conread position:
               4-251
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 200
               

               Conread position:
               4-254
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-268
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 13
               

               Conread position:
               4-270
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               4-271
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 155
               

               Conread position:
               4-271
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 214
               

               Conread position:
               4-272
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               59, 96
               

               Conread position:
               4-284
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 279
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               230
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               15, 208
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 160
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 26
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 202
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               17, 286
               

               Conread position:
               4-290
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 149
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 168
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 157
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 66
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 287
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 276
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               5-218
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               5-289
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 149
               

               Conread position:
               6-186
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               58, 149
               

               Conread position:
               6-290
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               7-168
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               7-172
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               62, 152
               

               Conread position:
               7-173
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               7-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 33
               

               Conread position:
               7-180
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               148
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               11, 108
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               10, 135
               

               Conread position:
               7-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 132
               

               Conread position:
               7-267
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               9, 161
               

               Conread position:
               7-292
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 94
               

               Conread position:
               7-303
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               49, 205
               

               Conread position:
               8-252
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 142
               

               Conread position:
               9-161
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               9-234
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               9, 155
               

               Conread position:
               9-289
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 35
               

               Conread position:
               9-289
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 151
               

               Conread position:
               10-287
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 149
               

               Conread position:
               15-159
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               15-205
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               158, 24
               

               Conread position:
               15-272
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               41, 52
               

               Conread position:
               19-284
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               24-292
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               34, 78
               

               Conread position:
               25-321
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               51, 19
               

               Conread position:
               32-268
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               112, 135
               
Show alignments to all cow chromosomes.