Cow genome map


           Conread name:
           Ova1-OVRM10212D05
        

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               17, 115
               

               Conread position:
               1-181
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               17, 227
               

               Conread position:
               2-271
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               2-303
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 130
               

               Conread position:
               3-203
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               15, 60
               

               Conread position:
               3-289
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               4-127
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               4-128
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 75
               

               Conread position:
               4-148
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               69, 11
               

               Conread position:
               4-148
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               4-153
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 121
               

               Conread position:
               4-160
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               13, 49
               

               Conread position:
               4-168
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-170
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               4-181
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               4-186
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               4-197
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               162
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               4-203
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 183
               

               Conread position:
               4-204
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               4-229
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               4-230
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 83
               

               Conread position:
               4-243
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 221
               

               Conread position:
               4-250
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               4-252
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-254
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               4-266
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               14, 64
               

               Conread position:
               4-272
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               81, 66
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 280
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 152
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 287
               

               Conread position:
               4-290
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 95
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 264
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 138
               

               Conread position:
               4-293
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               13, 154
               

               Conread position:
               4-300
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 72
               

               Conread position:
               4-301
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 144
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 70
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 153
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 160
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               14, 157
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 152
               

               Conread position:
               4-304
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               78, 17
               

               Conread position:
               4-324
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 287
               

               Conread position:
               5-249
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               13, 65
               

               Conread position:
               6-304
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               7-187
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               11, 143
               

               Conread position:
               7-221
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               11, 153
               

               Conread position:
               7-251
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 216
               

               Conread position:
               7-292
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               7-314
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 146
               

               Conread position:
               9-132
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               9-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               9-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 89
               

               Conread position:
               9-262
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               24, 11
               

               Conread position:
               15-181
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               54, 96
               

               Conread position:
               15-240
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 128
               

               Conread position:
               15-240
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               53, 128
               

               Conread position:
               15-269
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 127
               

               Conread position:
               15-271
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               156, 57
               

               Conread position:
               17-268
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               17-291
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               50, 191
               

               Conread position:
               19-288
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               20-226
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               27-303
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               42, 174
               

               Conread position:
               33-170
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               33-220
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               37, 121
               

               Conread position:
               33-303
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               49, 121
               

               Conread position:
               39-295
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               193, 102
               

               Conread position:
               47-305
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               23, 167
               

               Conread position:
               156-288
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.