Cow genome map
| Conread name: | Ova1-OVRM10212D05 |
| Conread position: | 1-170 |
| Cow position: | chr14:19624206-19624390 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-177 |
| Cow position: | chr14:18657482-18657293 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 109 |
| Conread position: | 2-251 |
| Cow position: | chr14:33247312-33247045 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 2-303 |
| Cow position: | chr14:39618254-39617955 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 180 |
| Conread position: | 4-120 |
| Cow position: | chr14:39037358-39037479 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 4-147 |
| Cow position: | chr14:36289677-36289539 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 96 |
| Conread position: | 4-151 |
| Cow position: | chr14:34355570-34355421 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 14, 94 |
| Conread position: | 4-168 |
| Cow position: | chr14:12613970-12613805 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 14, 82 |
| Conread position: | 4-174 |
| Cow position: | chr14:4109353-4109169 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 14, 117 |
| Conread position: | 4-174 |
| Cow position: | chr14:30662110-30662291 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 4-175 |
| Cow position: | chr14:36709243-36709429 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 160 |
| Conread position: | 4-176 |
| Cow position: | chr14:41128018-41128196 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 4-177 |
| Cow position: | chr14:20932738-20932925 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 4-177 |
| Cow position: | chr14:38379145-38379327 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 4-187 |
| Cow position: | chr14:32452376-32452578 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-187 |
| Cow position: | chr14:49021779-49021585 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 121 |
| Conread position: | 4-191 |
| Cow position: | chr14:22966876-22967072 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 25, 156 |
| Conread position: | 4-233 |
| Cow position: | chr14:40269721-40269478 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 101 |
| Conread position: | 4-250 |
| Cow position: | chr14:33828284-33828524 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 103 |
| Conread position: | 4-271 |
| Cow position: | chr14:3878577-3878851 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 53, 236 |
| Conread position: | 4-289 |
| Cow position: | chr14:7647907-7647621 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 68, 16 |
| Conread position: | 4-289 |
| Cow position: | chr14:19863309-19863031 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 4-289 |
| Cow position: | chr14:24991946-24992229 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 4-292 |
| Cow position: | chr14:14317006-14317301 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 140, 34 |
| Conread position: | 4-292 |
| Cow position: | chr14:20600509-20600800 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 54 |
| Conread position: | 4-292 |
| Cow position: | chr14:25779215-25779515 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 4-292 |
| Cow position: | chr14:40230515-40230217 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 282 |
| Conread position: | 4-303 |
| Cow position: | chr14:18904488-18904173 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 289 |
| Conread position: | 4-303 |
| Cow position: | chr14:20666900-20666590 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 4-303 |
| Cow position: | chr14:39518818-39519138 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 153 |
| Conread position: | 4-305 |
| Cow position: | chr14:27312550-27312870 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 4-308 |
| Cow position: | chr14:20320967-20320675 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 4-308 |
| Cow position: | chr14:33538799-33538493 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 162 |
| Conread position: | 7-172 |
| Cow position: | chr14:34329527-34329357 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 7-172 |
| Cow position: | chr14:34330671-34330841 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 7-287 |
| Cow position: | chr14:21357674-21357979 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 247 |
| Conread position: | 7-289 |
| Cow position: | chr14:16237380-16237090 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 155 |
| Conread position: | 7-289 |
| Cow position: | chr14:42918216-42918515 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 7-292 |
| Cow position: | chr14:445538-445807 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 11, 83 |
| Conread position: | 7-308 |
| Cow position: | chr14:19222008-19222317 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 114 |
| Conread position: | 8-177 |
| Cow position: | chr14:19594012-19593833 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 8-181 |
| Cow position: | chr14:11748789-11748611 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 10, 148 |
| Conread position: | 8-254 |
| Cow position: | chr14:27355531-27355770 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 9-233 |
| Cow position: | chr14:12488570-12488327 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 9-289 |
| Cow position: | chr14:35509838-35509558 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 92 |
| Conread position: | 10-303 |
| Cow position: | chr14:24893886-24894188 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 188 |
| Conread position: | 15-162 |
| Cow position: | chr14:41716241-41716399 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 15-223 |
| Cow position: | chr14:8658119-8657908 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 15-289 |
| Cow position: | chr14:9110595-9110315 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 76 |
| Conread position: | 15-291 |
| Cow position: | chr14:6735725-6735452 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 196 |
| Conread position: | 15-293 |
| Cow position: | chr14:14622039-14621764 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 70 |
| Conread position: | 15-303 |
| Cow position: | chr14:28090840-28090544 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 41, 172 |
| Conread position: | 16-176 |
| Cow position: | chr14:15032894-15033062 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 17-289 |
| Cow position: | chr14:41180560-41180304 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 99, 22 |
| Conread position: | 25-304 |
| Cow position: | chr14:25385743-25385458 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 44, 132 |
| Conread position: | 32-289 |
| Cow position: | chr14:40721776-40721513 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 125 |
| Conread position: | 101-304 |
| Cow position: | chr14:29772457-29772654 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 25 |
Show alignments to all cow chromosomes.