Cow genome map
| Conread name: | Ova1-OVRM10212D05 |
| Conread position: | 2-182 |
| Cow position: | chr15:41327473-41327290 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 2-196 |
| Cow position: | chr15:51831429-51831220 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 2-289 |
| Cow position: | chr15:50957632-50957330 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 292 |
| Conread position: | 3-143 |
| Cow position: | chr15:10088487-10088633 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 3-181 |
| Cow position: | chr15:41620018-41619827 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 3-229 |
| Cow position: | chr15:19186451-19186213 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 7, 198 |
| Conread position: | 3-289 |
| Cow position: | chr15:47279971-47279692 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 15, 67 |
| Conread position: | 3-308 |
| Cow position: | chr15:22095295-22095592 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 168 |
| Conread position: | 4-152 |
| Cow position: | chr15:22938600-22938449 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-158 |
| Cow position: | chr15:26158446-26158284 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 4-161 |
| Cow position: | chr15:21522957-21523127 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 4-171 |
| Cow position: | chr15:12723257-12723425 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 4-172 |
| Cow position: | chr15:6462327-6462154 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 4-176 |
| Cow position: | chr15:4535081-4535259 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 150 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 14, 56 |
| Conread position: | 4-176 |
| Cow position: | chr15:38883322-38883509 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-180 |
| Cow position: | chr15:12316097-12316280 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 4-188 |
| Cow position: | chr15:7827867-7827674 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 14, 166 |
| Conread position: | 4-204 |
| Cow position: | chr15:36621583-36621799 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-210 |
| Cow position: | chr15:21421109-21421328 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 14, 103 |
| Conread position: | 4-217 |
| Cow position: | chr15:28126876-28126656 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-239 |
| Cow position: | chr15:4485311-4485559 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 92 |
| Conread position: | 4-240 |
| Cow position: | chr15:27281038-27281278 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 159 |
| Conread position: | 4-240 |
| Cow position: | chr15:46611097-46611334 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 83 |
| Conread position: | 4-272 |
| Cow position: | chr15:27863152-27862882 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 4-289 |
| Cow position: | chr15:4138303-4138593 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 155 |
| Conread position: | 4-289 |
| Cow position: | chr15:20534281-20533987 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 177 |
| Conread position: | 4-289 |
| Cow position: | chr15:31085706-31086013 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 294 |
| Conread position: | 4-289 |
| Cow position: | chr15:47821980-47822249 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 4-290 |
| Cow position: | chr15:16936673-16936403 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 4-292 |
| Cow position: | chr15:13554524-13554806 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 64 |
| Conread position: | 4-292 |
| Cow position: | chr15:19403151-19403441 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 4-292 |
| Cow position: | chr15:21388998-21388705 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 152 |
| Conread position: | 4-292 |
| Cow position: | chr15:23798359-23798056 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 202 |
| Conread position: | 4-294 |
| Cow position: | chr15:4788799-4788491 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 4-301 |
| Cow position: | chr15:42143026-42143326 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 61 |
| Conread position: | 4-303 |
| Cow position: | chr15:22168228-22168540 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 285 |
| Conread position: | 4-303 |
| Cow position: | chr15:28924595-28924290 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 149 |
| Conread position: | 4-303 |
| Cow position: | chr15:38898591-38898898 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 14, 198 |
| Conread position: | 4-303 |
| Cow position: | chr15:42415428-42415743 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 12, 287 |
| Conread position: | 4-305 |
| Cow position: | chr15:15041264-15040958 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 250 |
| Conread position: | 4-309 |
| Cow position: | chr15:17196311-17196630 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 284 |
| Conread position: | 4-331 |
| Cow position: | chr15:43626638-43626957 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 172 |
| Conread position: | 5-301 |
| Cow position: | chr15:51632868-51632570 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 6-292 |
| Cow position: | chr15:20370284-20370006 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 7-177 |
| Cow position: | chr15:2952956-2952777 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 10, 153 |
| Conread position: | 7-231 |
| Cow position: | chr15:17084381-17084616 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 168 |
| Conread position: | 7-254 |
| Cow position: | chr15:45244-44990 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 11, 139 |
| Conread position: | 7-292 |
| Cow position: | chr15:19119431-19119151 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 119 |
| Conread position: | 7-292 |
| Cow position: | chr15:34104444-34104732 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 272 |
| Conread position: | 8-176 |
| Cow position: | chr15:17100536-17100364 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 10, 147 |
| Conread position: | 8-302 |
| Cow position: | chr15:9267878-9267586 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 24 |
| Conread position: | 9-182 |
| Cow position: | chr15:21366022-21365842 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 9, 145 |
| Conread position: | 9-228 |
| Cow position: | chr15:44256652-44256881 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 48, 87 |
| Conread position: | 9-286 |
| Cow position: | chr15:18206337-18206058 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 8, 187 |
| Conread position: | 10-148 |
| Cow position: | chr15:4501153-4501304 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 15-272 |
| Cow position: | chr15:9624054-9624324 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 15-272 |
| Cow position: | chr15:20487031-20486759 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 15-289 |
| Cow position: | chr15:7430159-7430445 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 173 |
| Conread position: | 15-292 |
| Cow position: | chr15:31992708-31992992 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 145 |
| Conread position: | 22-272 |
| Cow position: | chr15:12259524-12259772 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 60, 132 |
| Conread position: | 25-289 |
| Cow position: | chr15:24977001-24976728 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 32-272 |
| Cow position: | chr15:31855319-31855079 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 38 |
| Conread position: | 33-289 |
| Cow position: | chr15:37040100-37039849 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 40, 121 |
| Conread position: | 34-181 |
| Cow position: | chr15:40343460-40343607 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 81-303 |
| Cow position: | chr15:10132789-10133009 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 206, 0 |
Show alignments to all cow chromosomes.