Cow genome map
| Conread name: | Ova1-OVRM10212D05 |
| Conread position: | 2-138 |
| Cow position: | chr16:12361056-12361197 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 2-292 |
| Cow position: | chr16:8840816-8840515 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 285 |
| Conread position: | 3-176 |
| Cow position: | chr16:44210645-44210809 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 3-289 |
| Cow position: | chr16:16424684-16424978 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 4-163 |
| Cow position: | chr16:13969453-13969629 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-164 |
| Cow position: | chr16:38905310-38905477 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-171 |
| Cow position: | chr16:24702771-24702594 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-176 |
| Cow position: | chr16:48145484-48145662 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-181 |
| Cow position: | chr16:47662632-47662445 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-181 |
| Cow position: | chr16:52889491-52889678 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 4-182 |
| Cow position: | chr16:24672436-24672628 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 133 |
| Conread position: | 4-190 |
| Cow position: | chr16:3246286-3246469 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 14, 81 |
| Conread position: | 4-196 |
| Cow position: | chr16:43308643-43308843 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 145 |
| Conread position: | 4-202 |
| Cow position: | chr16:51869559-51869349 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 4-203 |
| Cow position: | chr16:43505880-43506090 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 4-226 |
| Cow position: | chr16:820167-819942 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 199 |
| Conread position: | 4-226 |
| Cow position: | chr16:42242197-42242431 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 132 |
| Conread position: | 4-243 |
| Cow position: | chr16:23472666-23472413 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-244 |
| Cow position: | chr16:4103240-4103491 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 12, 28 |
| Conread position: | 4-250 |
| Cow position: | chr16:9933077-9932818 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 4-251 |
| Cow position: | chr16:25287769-25288045 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 4-254 |
| Cow position: | chr16:13791436-13791164 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 4-257 |
| Cow position: | chr16:28191987-28191726 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 4-267 |
| Cow position: | chr16:22842140-22842423 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 61 |
| Conread position: | 4-270 |
| Cow position: | chr16:35758130-35757860 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 4-270 |
| Cow position: | chr16:42340115-42339848 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 170 |
| Conread position: | 4-271 |
| Cow position: | chr16:43801000-43801251 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 29 |
| Conread position: | 4-272 |
| Cow position: | chr16:9790712-9790984 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 140 |
| Conread position: | 4-272 |
| Cow position: | chr16:23738098-23737826 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 13, 152 |
| Conread position: | 4-272 |
| Cow position: | chr16:44973414-44973130 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 113 |
| Conread position: | 4-289 |
| Cow position: | chr16:4699062-4699327 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 4-289 |
| Cow position: | chr16:7542205-7541917 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 147 |
| Conread position: | 4-289 |
| Cow position: | chr16:15726449-15726735 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 4-289 |
| Cow position: | chr16:16096655-16096372 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 149 |
| Conread position: | 4-289 |
| Cow position: | chr16:30311191-30311479 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 92 |
| Conread position: | 4-289 |
| Cow position: | chr16:32132444-32132160 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 4-289 |
| Cow position: | chr16:35188173-35187881 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 156 |
| Conread position: | 4-289 |
| Cow position: | chr16:42217767-42218067 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 287 |
| Conread position: | 4-289 |
| Cow position: | chr16:51112958-51113247 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 156 |
| Conread position: | 4-289 |
| Cow position: | chr16:56912798-56913086 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 178 |
| Conread position: | 4-290 |
| Cow position: | chr16:17142857-17142562 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 148 |
| Conread position: | 4-292 |
| Cow position: | chr16:11568198-11568486 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 4-292 |
| Cow position: | chr16:14028708-14028994 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 36 |
| Conread position: | 4-292 |
| Cow position: | chr16:28922704-28922414 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 105 |
| Conread position: | 4-301 |
| Cow position: | chr16:12633805-12633523 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 124 |
| Conread position: | 4-301 |
| Cow position: | chr16:15363663-15363366 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 180 |
| Conread position: | 4-302 |
| Cow position: | chr16:7152253-7152543 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 14, 157 |
| Conread position: | 4-303 |
| Cow position: | chr16:5726841-5726542 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 96 |
| Conread position: | 4-303 |
| Cow position: | chr16:13698431-13698116 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 290 |
| Conread position: | 4-303 |
| Cow position: | chr16:15407961-15408261 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 156 |
| Conread position: | 4-303 |
| Cow position: | chr16:16265180-16265486 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 15, 123 |
| Conread position: | 4-303 |
| Cow position: | chr16:18757922-18758227 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 63, 145 |
| Conread position: | 4-303 |
| Cow position: | chr16:49169466-49169767 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 5-167 |
| Cow position: | chr16:26373034-26373205 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 12, 86 |
| Conread position: | 5-176 |
| Cow position: | chr16:11619668-11619491 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 5-202 |
| Cow position: | chr16:7997696-7997903 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 13, 65 |
| Conread position: | 5-251 |
| Cow position: | chr16:4293634-4293377 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 13, 211 |
| Conread position: | 7-146 |
| Cow position: | chr16:4277798-4277947 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 7-171 |
| Cow position: | chr16:4902502-4902344 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 7-180 |
| Cow position: | chr16:5256915-5256736 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 7-182 |
| Cow position: | chr16:10039923-10040106 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 11, 178 |
| Conread position: | 7-251 |
| Cow position: | chr16:29067084-29066830 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 7-289 |
| Cow position: | chr16:54298386-54298106 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 88 |
| Conread position: | 7-292 |
| Cow position: | chr16:39165160-39164885 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 10, 152 |
| Conread position: | 7-295 |
| Cow position: | chr16:8807175-8807470 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 7-303 |
| Cow position: | chr16:7702451-7702141 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 197 |
| Conread position: | 8-304 |
| Cow position: | chr16:26676772-26677065 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 234 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 10, 150 |
| Conread position: | 9-158 |
| Cow position: | chr16:29557715-29557876 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 59, 30 |
| Conread position: | 9-211 |
| Cow position: | chr16:33482351-33482141 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 47, 208 |
| Conread position: | 9-303 |
| Cow position: | chr16:43804411-43804111 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 170 |
| Conread position: | 10-177 |
| Cow position: | chr16:5741156-5740991 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 10-238 |
| Cow position: | chr16:5845583-5845344 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 191 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 8, 133 |
| Conread position: | 10-303 |
| Cow position: | chr16:28431350-28431654 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 46, 143 |
| Conread position: | 10-303 |
| Cow position: | chr16:49216061-49216346 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 68 |
| Conread position: | 14-289 |
| Cow position: | chr16:5415856-5416128 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 25 |
| Conread position: | 15-209 |
| Cow position: | chr16:33752103-33751901 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 15-290 |
| Cow position: | chr16:14661693-14661966 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 54, 65 |
| Conread position: | 17-235 |
| Cow position: | chr16:11620899-11621125 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 20-303 |
| Cow position: | chr16:51088211-51087924 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 36, 260 |
| Conread position: | 21-272 |
| Cow position: | chr16:44688381-44688658 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 8 |
| Conread position: | 27-289 |
| Cow position: | chr16:22804698-22804947 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 32-270 |
| Cow position: | chr16:46452874-46453120 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 36, 122 |
| Conread position: | 34-304 |
| Cow position: | chr16:26655073-26654797 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 34, 116 |
Show alignments to all cow chromosomes.