Cow genome map
| Conread name: | Ova1-OVRM10212D05 |
| Conread position: | 1-180 |
| Cow position: | chr18:11166869-11166680 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-179 |
| Cow position: | chr18:19831180-19831000 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 70, 178 |
| Conread position: | 2-271 |
| Cow position: | chr18:39662667-39662387 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 104 |
| Conread position: | 3-303 |
| Cow position: | chr18:51691576-51691888 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 285 |
| Conread position: | 3-304 |
| Cow position: | chr18:26937610-26937305 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 11 |
| Conread position: | 4-172 |
| Cow position: | chr18:267929-268102 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 14, 97 |
| Conread position: | 4-174 |
| Cow position: | chr18:39115253-39115437 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-175 |
| Cow position: | chr18:4529396-4529226 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 12, 68 |
| Conread position: | 4-177 |
| Cow position: | chr18:4648855-4649031 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 4-180 |
| Cow position: | chr18:5766298-5766130 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 4-204 |
| Cow position: | chr18:13359950-13359743 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 4-236 |
| Cow position: | chr18:56159347-56159104 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 126 |
| Conread position: | 4-248 |
| Cow position: | chr18:2774715-2774954 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 13, 61 |
| Conread position: | 4-254 |
| Cow position: | chr18:29371755-29371494 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 14, 131 |
| Conread position: | 4-272 |
| Cow position: | chr18:49543362-49543098 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 14, 174 |
| Conread position: | 4-289 |
| Cow position: | chr18:11322489-11322183 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 293 |
| Conread position: | 4-289 |
| Cow position: | chr18:17005143-17004848 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 208 |
| Conread position: | 4-289 |
| Cow position: | chr18:23062313-23062609 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 278 |
| Conread position: | 4-289 |
| Cow position: | chr18:35058225-35057944 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 13, 112 |
| Conread position: | 4-290 |
| Cow position: | chr18:23447195-23447489 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 4-292 |
| Cow position: | chr18:39001916-39002204 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 104 |
| Conread position: | 4-301 |
| Cow position: | chr18:9066584-9066297 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 222, 68 |
| Conread position: | 4-303 |
| Cow position: | chr18:22092663-22092369 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 14, 220 |
| Conread position: | 4-304 |
| Cow position: | chr18:50082364-50082654 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 4-307 |
| Cow position: | chr18:4316197-4315875 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 291 |
| Conread position: | 4-308 |
| Cow position: | chr18:42747482-42747162 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 114 |
| Conread position: | 4-309 |
| Cow position: | chr18:31672624-31672927 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 7-148 |
| Cow position: | chr18:19761584-19761431 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 7-176 |
| Cow position: | chr18:47868343-47868160 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 7-177 |
| Cow position: | chr18:48290553-48290734 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 7-209 |
| Cow position: | chr18:15025557-15025349 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 7-289 |
| Cow position: | chr18:16134422-16134714 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 113 |
| Conread position: | 7-292 |
| Cow position: | chr18:14586582-14586891 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 150 |
| Conread position: | 9-156 |
| Cow position: | chr18:5711786-5711943 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 9-181 |
| Cow position: | chr18:2592287-2592473 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-295 |
| Cow position: | chr18:2608847-2609147 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 279 |
| Conread position: | 15-148 |
| Cow position: | chr18:52402642-52402785 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 15-174 |
| Cow position: | chr18:16847566-16847405 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 15-177 |
| Cow position: | chr18:22214356-22214190 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 20-215 |
| Cow position: | chr18:43065384-43065178 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 48, 182 |
| Conread position: | 25-303 |
| Cow position: | chr18:21528260-21527986 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 39-233 |
| Cow position: | chr18:32228677-32228879 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.