Cow genome map
| Conread name: | Ova1-OVRM10212D05 |
| Conread position: | 1-292 |
| Cow position: | chr19:48409421-48409129 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 2-166 |
| Cow position: | chr19:12747866-12748029 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 2-303 |
| Cow position: | chr19:19499644-19499951 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 123 |
| Conread position: | 3-174 |
| Cow position: | chr19:48722938-48722754 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 14, 164 |
| Conread position: | 3-174 |
| Cow position: | chr19:55983148-55982982 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 3-287 |
| Cow position: | chr19:8211927-8212224 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 286 |
| Conread position: | 4-169 |
| Cow position: | chr19:35076589-35076754 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 4-171 |
| Cow position: | chr19:38637898-38638070 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 4-176 |
| Cow position: | chr19:7492342-7492165 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 4-177 |
| Cow position: | chr19:4537509-4537687 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 148 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 14, 152 |
| Conread position: | 4-177 |
| Cow position: | chr19:10080977-10080794 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-180 |
| Cow position: | chr19:33882253-33882435 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 4-181 |
| Cow position: | chr19:20935661-20935476 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 4-181 |
| Cow position: | chr19:40449923-40449753 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 4-186 |
| Cow position: | chr19:50562582-50562401 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 4-193 |
| Cow position: | chr19:18015811-18015995 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 13, 85 |
| Conread position: | 4-199 |
| Cow position: | chr19:21065673-21065482 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 4-203 |
| Cow position: | chr19:30925414-30925616 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 14, 152 |
| Conread position: | 4-250 |
| Cow position: | chr19:38340072-38340319 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 146 |
| Conread position: | 4-250 |
| Cow position: | chr19:43058444-43058184 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 15, 243 |
| Conread position: | 4-251 |
| Cow position: | chr19:56063526-56063777 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 13, 88 |
| Conread position: | 4-252 |
| Cow position: | chr19:2138197-2138452 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 219 |
| Conread position: | 4-262 |
| Cow position: | chr19:38596527-38596260 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 233 |
| Conread position: | 4-287 |
| Cow position: | chr19:3489409-3489114 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 13, 165 |
| Conread position: | 4-289 |
| Cow position: | chr19:8128228-8127932 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 219 |
| Conread position: | 4-290 |
| Cow position: | chr19:24358322-24358612 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 4-292 |
| Cow position: | chr19:2589416-2589128 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 4-303 |
| Cow position: | chr19:3246143-3246433 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 4-303 |
| Cow position: | chr19:8496389-8496699 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 14, 192 |
| Conread position: | 4-303 |
| Cow position: | chr19:31874020-31873708 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 97 |
| Conread position: | 4-305 |
| Cow position: | chr19:35380642-35380947 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 5-230 |
| Cow position: | chr19:36461621-36461856 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 5-304 |
| Cow position: | chr19:20699999-20699687 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 63, 285 |
| Conread position: | 7-172 |
| Cow position: | chr19:53791521-53791700 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 7-173 |
| Cow position: | chr19:13390822-13390649 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 7-176 |
| Cow position: | chr19:14993018-14993194 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 75 |
| Conread position: | 7-190 |
| Cow position: | chr19:20622561-20622374 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 11, 137 |
| Conread position: | 7-305 |
| Cow position: | chr19:46159962-46159667 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 10, 34 |
| Conread position: | 9-181 |
| Cow position: | chr19:7473603-7473424 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 9, 95 |
| Conread position: | 9-203 |
| Cow position: | chr19:53645512-53645715 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 146 |
| Conread position: | 9-289 |
| Cow position: | chr19:10755218-10754927 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 176 |
| Conread position: | 9-303 |
| Cow position: | chr19:37562098-37562403 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 15-199 |
| Cow position: | chr19:24935918-24936113 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 15-254 |
| Cow position: | chr19:11232033-11232279 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 51 |
| Conread position: | 15-288 |
| Cow position: | chr19:51401111-51401394 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 271 |
| Conread position: | 15-291 |
| Cow position: | chr19:11820763-11821038 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 15-302 |
| Cow position: | chr19:47727676-47727968 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 21-277 |
| Cow position: | chr19:5934545-5934804 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 63, 49 |
| Conread position: | 21-293 |
| Cow position: | chr19:21115198-21114915 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 23-291 |
| Cow position: | chr19:14573264-14572984 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 143 |
| Conread position: | 42-292 |
| Cow position: | chr19:19173978-19173723 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 240 |
| Conread position: | 56-288 |
| Cow position: | chr19:42514-42282 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.