Cow genome map
| Conread name: | Ova1-OVRM10212D05 |
| Conread position: | 2-289 |
| Cow position: | chr21:14760558-14760275 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 177 |
| Conread position: | 2-303 |
| Cow position: | chr21:15976617-15976317 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 88 |
| Conread position: | 2-303 |
| Cow position: | chr21:42501023-42500712 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 173 |
| Conread position: | 3-272 |
| Cow position: | chr21:23586863-23586568 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 226 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 3-289 |
| Cow position: | chr21:25382997-25382688 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 122 |
| Conread position: | 4-145 |
| Cow position: | chr21:10001057-10000912 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 14, 105 |
| Conread position: | 4-153 |
| Cow position: | chr21:18790577-18790732 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-158 |
| Cow position: | chr21:39450181-39450349 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 155 |
| Conread position: | 4-171 |
| Cow position: | chr21:42841618-42841785 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 4-174 |
| Cow position: | chr21:32339755-32339932 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 159 |
| Conread position: | 4-176 |
| Cow position: | chr21:1059060-1058878 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 13, 159 |
| Conread position: | 4-176 |
| Cow position: | chr21:6051489-6051307 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 4-177 |
| Cow position: | chr21:7710148-7709965 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-180 |
| Cow position: | chr21:46829288-46829469 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 4-204 |
| Cow position: | chr21:37361494-37361701 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 14, 186 |
| Conread position: | 4-224 |
| Cow position: | chr21:46242255-46242480 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 64, 158 |
| Conread position: | 4-236 |
| Cow position: | chr21:39403554-39403797 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 158 |
| Conread position: | 4-251 |
| Cow position: | chr21:33562996-33562740 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 14, 123 |
| Conread position: | 4-267 |
| Cow position: | chr21:15545387-15545655 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 15, 142 |
| Conread position: | 4-284 |
| Cow position: | chr21:32237277-32236994 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 178 |
| Conread position: | 4-288 |
| Cow position: | chr21:42384492-42384199 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 15, 198 |
| Conread position: | 4-289 |
| Cow position: | chr21:13898167-13897883 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 144 |
| Conread position: | 4-289 |
| Cow position: | chr21:20925524-20925815 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 151 |
| Conread position: | 4-290 |
| Cow position: | chr21:24607373-24607072 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 287 |
| Conread position: | 4-295 |
| Cow position: | chr21:36642889-36642590 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 279 |
| Conread position: | 4-301 |
| Cow position: | chr21:30231709-30232023 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 205 |
| Conread position: | 4-303 |
| Cow position: | chr21:22718796-22719104 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 196 |
| Conread position: | 4-303 |
| Cow position: | chr21:25344854-25344554 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 150 |
| Conread position: | 4-304 |
| Cow position: | chr21:39401576-39401275 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 6-170 |
| Cow position: | chr21:3047663-3047493 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 66, 138 |
| Conread position: | 7-172 |
| Cow position: | chr21:9998738-9998916 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 150 |
| Conread position: | 7-177 |
| Cow position: | chr21:47066918-47067087 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 7-182 |
| Cow position: | chr21:19258809-19258621 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 7-247 |
| Cow position: | chr21:44251856-44252098 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 7-272 |
| Cow position: | chr21:36756578-36756320 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 11, 66 |
| Conread position: | 7-289 |
| Cow position: | chr21:28924093-28923833 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 60, 117 |
| Conread position: | 9-289 |
| Cow position: | chr21:27863539-27863829 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 15-254 |
| Cow position: | chr21:17511748-17511502 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 44, 205 |
| Conread position: | 15-303 |
| Cow position: | chr21:23984309-23984608 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 272 |
| Conread position: | 17-218 |
| Cow position: | chr21:38918184-38917977 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 15, 143 |
| Conread position: | 20-289 |
| Cow position: | chr21:18978881-18979165 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 65, 133 |
| Conread position: | 20-303 |
| Cow position: | chr21:1511034-1510771 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 47, 19 |
| Conread position: | 25-240 |
| Cow position: | chr21:14464540-14464302 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 44, 129 |
| Conread position: | 32-176 |
| Cow position: | chr21:21000076-21000225 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 80 |
| Conread position: | 32-303 |
| Cow position: | chr21:24296818-24297087 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 120 |
Show alignments to all cow chromosomes.