Cow genome map
| Conread name: | Ova1-OVRM10212D05 |
| Conread position: | 1-162 |
| Cow position: | chr22:295017-295189 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-209 |
| Cow position: | chr22:610019-610222 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 2-238 |
| Cow position: | chr22:8767260-8767020 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 16, 117 |
| Conread position: | 3-292 |
| Cow position: | chr22:19738659-19738950 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 4-142 |
| Cow position: | chr22:10585787-10585933 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 4-153 |
| Cow position: | chr22:2141730-2141571 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-159 |
| Cow position: | chr22:3253032-3253185 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 14, 84 |
| Conread position: | 4-170 |
| Cow position: | chr22:13286366-13286183 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-170 |
| Cow position: | chr22:31592943-31593121 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-172 |
| Cow position: | chr22:15090656-15090478 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 4-172 |
| Cow position: | chr22:35533445-35533617 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 4-174 |
| Cow position: | chr22:1821958-1822137 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 14, 157 |
| Conread position: | 4-176 |
| Cow position: | chr22:25341936-25341754 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 4-176 |
| Cow position: | chr22:28058137-28058307 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 4-177 |
| Cow position: | chr22:9278813-9278636 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 147 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 4-177 |
| Cow position: | chr22:9521057-9520883 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 4-184 |
| Cow position: | chr22:37201769-37201583 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 14, 116 |
| Conread position: | 4-195 |
| Cow position: | chr22:14602481-14602681 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-224 |
| Cow position: | chr22:22013635-22013407 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 12, 155 |
| Conread position: | 4-234 |
| Cow position: | chr22:41245160-41244918 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 4-239 |
| Cow position: | chr22:14601419-14601194 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 4-241 |
| Cow position: | chr22:34398542-34398786 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-251 |
| Cow position: | chr22:42605545-42605293 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 17, 106 |
| Conread position: | 4-268 |
| Cow position: | chr22:3960368-3960654 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-288 |
| Cow position: | chr22:33448166-33448462 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 4-289 |
| Cow position: | chr22:11500696-11500404 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 142 |
| Conread position: | 4-289 |
| Cow position: | chr22:30472961-30472669 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 184 |
| Conread position: | 4-289 |
| Cow position: | chr22:38940033-38940325 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 198 |
| Conread position: | 4-291 |
| Cow position: | chr22:27322233-27321944 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 155 |
| Conread position: | 4-292 |
| Cow position: | chr22:10685173-10685458 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 4-303 |
| Cow position: | chr22:6122985-6123276 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 35 |
| Conread position: | 4-303 |
| Cow position: | chr22:6622329-6622636 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 157 |
| Conread position: | 4-303 |
| Cow position: | chr22:15050081-15049772 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 14, 183 |
| Conread position: | 4-303 |
| Cow position: | chr22:33094477-33094170 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 280 |
| Conread position: | 4-304 |
| Cow position: | chr22:11987299-11987606 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 196 |
| Conread position: | 4-304 |
| Cow position: | chr22:34894889-34894582 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 182 |
| Conread position: | 4-307 |
| Cow position: | chr22:25206050-25206365 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 160 |
| Conread position: | 4-309 |
| Cow position: | chr22:2502751-2502439 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 15, 154 |
| Conread position: | 5-151 |
| Cow position: | chr22:23403732-23403882 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 5-292 |
| Cow position: | chr22:13841052-13840764 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 155 |
| Conread position: | 7-176 |
| Cow position: | chr22:19775519-19775691 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 7-220 |
| Cow position: | chr22:40387072-40386854 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 10, 58 |
| Conread position: | 7-272 |
| Cow position: | chr22:41982803-41983066 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 7-289 |
| Cow position: | chr22:26316383-26316102 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 142 |
| Conread position: | 7-289 |
| Cow position: | chr22:32188936-32189215 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 7-292 |
| Cow position: | chr22:12637592-12637302 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 7-292 |
| Cow position: | chr22:16327413-16327143 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 11, 151 |
| Conread position: | 7-301 |
| Cow position: | chr22:40120963-40121253 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 169 |
| Conread position: | 7-304 |
| Cow position: | chr22:11130780-11130483 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 7-311 |
| Cow position: | chr22:25943389-25943083 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 272 |
| Conread position: | 7-312 |
| Cow position: | chr22:13720611-13720932 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 11, 122 |
| Conread position: | 15-231 |
| Cow position: | chr22:852931-852708 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 47, 6 |
| Conread position: | 15-289 |
| Cow position: | chr22:4535420-4535700 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 54, 142 |
| Conread position: | 15-303 |
| Cow position: | chr22:16235746-16236041 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 145 |
| Conread position: | 17-177 |
| Cow position: | chr22:46610878-46611048 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 21-270 |
| Cow position: | chr22:28120692-28120431 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 7 |
| Conread position: | 25-289 |
| Cow position: | chr22:9372406-9372161 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 44, 104 |
| Conread position: | 39-304 |
| Cow position: | chr22:44798212-44798488 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 155 |
| Conread position: | 41-171 |
| Cow position: | chr22:19047940-19048064 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 60-288 |
| Cow position: | chr22:34172524-34172296 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 85, 7 |
Show alignments to all cow chromosomes.