Cow genome map
| Conread name: | Ova1-OVRM10212D05 |
| Conread position: | 1-250 |
| Cow position: | chr23:29471200-29471449 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 154 |
| Conread position: | 1-290 |
| Cow position: | chr23:35926516-35926226 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 195 |
| Conread position: | 1-301 |
| Cow position: | chr23:13520374-13520072 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 115 |
| Conread position: | 2-148 |
| Cow position: | chr23:15743014-15742866 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 2-180 |
| Cow position: | chr23:26949122-26948923 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 3-170 |
| Cow position: | chr23:26632724-26632545 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 3-252 |
| Cow position: | chr23:38455260-38455522 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 113 |
| Conread position: | 3-272 |
| Cow position: | chr23:9734336-9734063 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 148 |
| Conread position: | 4-122 |
| Cow position: | chr23:23409660-23409539 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 67 |
| Conread position: | 4-148 |
| Cow position: | chr23:25378575-25378423 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 116 |
| Conread position: | 4-163 |
| Cow position: | chr23:18402368-18402534 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-169 |
| Cow position: | chr23:19979026-19979202 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 66, 14 |
| Conread position: | 4-172 |
| Cow position: | chr23:20056946-20057124 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 4-175 |
| Cow position: | chr23:15287209-15287394 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-177 |
| Cow position: | chr23:29242871-29242682 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-206 |
| Cow position: | chr23:1690712-1690497 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 4-213 |
| Cow position: | chr23:27862253-27862030 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 14, 145 |
| Conread position: | 4-214 |
| Cow position: | chr23:4726708-4726503 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 83 |
| Conread position: | 4-221 |
| Cow position: | chr23:3247505-3247285 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 179 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 4-236 |
| Cow position: | chr23:39309194-39309435 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 4-250 |
| Cow position: | chr23:1337380-1337649 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 14, 139 |
| Conread position: | 4-254 |
| Cow position: | chr23:37065763-37065502 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 193 |
| Conread position: | 4-255 |
| Cow position: | chr23:5162348-5162087 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 199 |
| Conread position: | 4-272 |
| Cow position: | chr23:31607234-31607529 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 4-288 |
| Cow position: | chr23:1647539-1647248 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 36 |
| Conread position: | 4-289 |
| Cow position: | chr23:1923916-1924205 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 4-292 |
| Cow position: | chr23:6592779-6593085 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 83 |
| Conread position: | 4-292 |
| Cow position: | chr23:7596411-7596704 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 125 |
| Conread position: | 4-295 |
| Cow position: | chr23:33601607-33601898 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 157 |
| Conread position: | 4-304 |
| Cow position: | chr23:21336566-21336876 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 287 |
| Conread position: | 4-307 |
| Cow position: | chr23:15710152-15710469 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 121 |
| Conread position: | 4-307 |
| Cow position: | chr23:36309341-36309027 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 5-272 |
| Cow position: | chr23:9235152-9235422 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 35 |
| Conread position: | 5-292 |
| Cow position: | chr23:14565798-14566098 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 65, 34 |
| Conread position: | 5-292 |
| Cow position: | chr23:25864768-25865054 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 5-292 |
| Cow position: | chr23:40526053-40526346 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 63, 15 |
| Conread position: | 7-156 |
| Cow position: | chr23:24704199-24704033 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 7-163 |
| Cow position: | chr23:2055623-2055454 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 7-176 |
| Cow position: | chr23:9652561-9652728 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 26 |
| Conread position: | 7-181 |
| Cow position: | chr23:13555514-13555694 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 7-254 |
| Cow position: | chr23:26841357-26841117 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 7-308 |
| Cow position: | chr23:1429877-1430190 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 8-188 |
| Cow position: | chr23:20195000-20195189 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 176 |
| Conread position: | 9-152 |
| Cow position: | chr23:3910089-3910243 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 9-251 |
| Cow position: | chr23:39753033-39752778 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 9-254 |
| Cow position: | chr23:39778321-39778077 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 10-267 |
| Cow position: | chr23:28053191-28052925 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 10-270 |
| Cow position: | chr23:27997051-27996783 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 8, 179 |
| Conread position: | 10-270 |
| Cow position: | chr23:28206525-28206260 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 8, 196 |
| Conread position: | 11-200 |
| Cow position: | chr23:4972698-4972501 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 7, 84 |
| Conread position: | 15-228 |
| Cow position: | chr23:7937636-7937849 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 15-293 |
| Cow position: | chr23:18322507-18322794 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 148 |
| Conread position: | 15-303 |
| Cow position: | chr23:40778175-40777877 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 148 |
| Conread position: | 17-251 |
| Cow position: | chr23:6995072-6995302 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 185 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 17-272 |
| Cow position: | chr23:10844215-10843969 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 17, 58 |
| Conread position: | 17-289 |
| Cow position: | chr23:4980639-4980900 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 20-133 |
| Cow position: | chr23:19295040-19295158 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 24-176 |
| Cow position: | chr23:38414058-38414218 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 41, 108 |
| Conread position: | 39-267 |
| Cow position: | chr23:5151877-5151629 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 30, 214 |
| Conread position: | 75-288 |
| Cow position: | chr23:11711661-11711874 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.