Cow genome map


           Conread name:
           Ova1-OVRM10212D05
        

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 159
               

               Conread position:
               2-162
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 155
               

               Conread position:
               2-292
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               16, 188
               

               Conread position:
               2-303
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               3-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               4-159
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               14, 136
               

               Conread position:
               4-163
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               14, 146
               

               Conread position:
               4-174
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-174
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 66
               

               Conread position:
               4-177
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-181
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               14, 29
               

               Conread position:
               4-190
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               12, 127
               

               Conread position:
               4-194
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 19
               

               Conread position:
               4-203
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               14, 171
               

               Conread position:
               4-208
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 68
               

               Conread position:
               4-217
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 127
               

               Conread position:
               4-219
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               4-254
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 14
               

               Conread position:
               4-254
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 206
               

               Conread position:
               4-268
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               14, 106
               

               Conread position:
               4-270
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 161
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 280
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 161
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 158
               

               Conread position:
               4-290
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 285
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               14, 69
               

               Conread position:
               4-301
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 289
               

               Conread position:
               4-301
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 200
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               14, 123
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 43
               

               Conread position:
               5-176
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               5-177
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 156
               

               Conread position:
               6-237
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 145
               

               Conread position:
               7-168
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               7-177
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               11, 139
               

               Conread position:
               7-289
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 146
               

               Conread position:
               9-174
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               8, 62
               

               Conread position:
               9-308
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 156
               

               Conread position:
               12-290
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               5, 54
               

               Conread position:
               15-169
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               19, 116
               

               Conread position:
               15-186
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               15-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               15-303
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               70, 55
               

               Conread position:
               22-289
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 17
               

               Conread position:
               24-292
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 241
               

               Conread position:
               25-289
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               47, 14
               

               Conread position:
               37-303
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 27
               

               Conread position:
               140-288
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               132, 141
               
Show alignments to all cow chromosomes.