Cow genome map
| Conread name: | Ova1-OVRM10212D05 |
| Conread position: | 1-176 |
| Cow position: | chr24:44702875-44702691 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 17, 159 |
| Conread position: | 2-162 |
| Cow position: | chr24:21860327-21860493 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 155 |
| Conread position: | 2-292 |
| Cow position: | chr24:15473257-15472957 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 16, 188 |
| Conread position: | 2-303 |
| Cow position: | chr24:19658453-19658133 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 3-172 |
| Cow position: | chr24:18243572-18243748 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 4-159 |
| Cow position: | chr24:16994782-16994624 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 14, 136 |
| Conread position: | 4-163 |
| Cow position: | chr24:18390394-18390562 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 14, 146 |
| Conread position: | 4-174 |
| Cow position: | chr24:2730675-2730855 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-174 |
| Cow position: | chr24:14729293-14729124 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 66 |
| Conread position: | 4-177 |
| Cow position: | chr24:8886810-8886628 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-181 |
| Cow position: | chr24:17294297-17294479 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 14, 29 |
| Conread position: | 4-190 |
| Cow position: | chr24:19535357-19535545 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 12, 127 |
| Conread position: | 4-194 |
| Cow position: | chr24:18333199-18333376 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 65, 19 |
| Conread position: | 4-203 |
| Cow position: | chr24:15861706-15861911 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 14, 171 |
| Conread position: | 4-208 |
| Cow position: | chr24:18970613-18970807 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 4-217 |
| Cow position: | chr24:18734457-18734688 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 127 |
| Conread position: | 4-219 |
| Cow position: | chr24:34315248-34315029 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 4-254 |
| Cow position: | chr24:18405426-18405669 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 14 |
| Conread position: | 4-254 |
| Cow position: | chr24:43364254-43363995 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 206 |
| Conread position: | 4-268 |
| Cow position: | chr24:24136962-24137239 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 14, 106 |
| Conread position: | 4-270 |
| Cow position: | chr24:39218947-39219227 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 161 |
| Conread position: | 4-288 |
| Cow position: | chr24:29673414-29673122 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 280 |
| Conread position: | 4-289 |
| Cow position: | chr24:7917468-7917767 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 161 |
| Conread position: | 4-289 |
| Cow position: | chr24:21264614-21264904 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 158 |
| Conread position: | 4-290 |
| Cow position: | chr24:6450391-6450133 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 14, 61 |
| Conread position: | 4-292 |
| Cow position: | chr24:11007114-11006812 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 285 |
| Conread position: | 4-292 |
| Cow position: | chr24:32204900-32205197 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 4-292 |
| Cow position: | chr24:43432687-43432384 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 4-301 |
| Cow position: | chr24:27906332-27906016 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 289 |
| Conread position: | 4-301 |
| Cow position: | chr24:39493189-39492885 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 200 |
| Conread position: | 4-302 |
| Cow position: | chr24:36486163-36486475 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 14, 123 |
| Conread position: | 4-303 |
| Cow position: | chr24:29595916-29596218 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 5-176 |
| Cow position: | chr24:16268220-16268390 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 5-177 |
| Cow position: | chr24:6507869-6508051 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 156 |
| Conread position: | 6-237 |
| Cow position: | chr24:16162687-16162450 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 145 |
| Conread position: | 7-168 |
| Cow position: | chr24:25424954-25424784 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 7-177 |
| Cow position: | chr24:28699949-28699769 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 139 |
| Conread position: | 7-289 |
| Cow position: | chr24:30484059-30484332 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 146 |
| Conread position: | 9-174 |
| Cow position: | chr24:39808029-39807873 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 8, 62 |
| Conread position: | 9-308 |
| Cow position: | chr24:40055832-40056135 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 156 |
| Conread position: | 12-290 |
| Cow position: | chr24:14363202-14363479 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 5, 54 |
| Conread position: | 15-169 |
| Cow position: | chr24:38811569-38811721 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 19, 116 |
| Conread position: | 15-186 |
| Cow position: | chr24:35405683-35405868 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 15-215 |
| Cow position: | chr24:36173898-36174109 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 15-303 |
| Cow position: | chr24:6141077-6141368 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 70, 55 |
| Conread position: | 22-289 |
| Cow position: | chr24:19466055-19466331 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 17 |
| Conread position: | 24-292 |
| Cow position: | chr24:16625627-16625899 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 241 |
| Conread position: | 25-289 |
| Cow position: | chr24:33730727-33730467 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 37-303 |
| Cow position: | chr24:27754546-27754284 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 27 |
| Conread position: | 140-288 |
| Cow position: | chr24:14353425-14353277 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 132, 141 |
Show alignments to all cow chromosomes.