Cow genome map
| Conread name: | Ova1-OVRM10212D05 |
| Conread position: | 3-174 |
| Cow position: | chr25:36535519-36535695 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 119 |
| Conread position: | 3-301 |
| Cow position: | chr25:18564407-18564102 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 143 |
| Conread position: | 3-303 |
| Cow position: | chr25:11585434-11585123 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 4-126 |
| Cow position: | chr25:12319431-12319553 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 4-145 |
| Cow position: | chr25:6256020-6256172 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 14, 114 |
| Conread position: | 4-165 |
| Cow position: | chr25:36026925-36026753 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-167 |
| Cow position: | chr25:35344947-35344782 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 4-172 |
| Cow position: | chr25:19679260-19679081 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 4-172 |
| Cow position: | chr25:35333075-35332912 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 4-176 |
| Cow position: | chr25:12081404-12081580 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 81 |
| Conread position: | 4-181 |
| Cow position: | chr25:17712453-17712262 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-208 |
| Cow position: | chr25:21894970-21895184 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 4-220 |
| Cow position: | chr25:10365834-10366060 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 172 |
| Conread position: | 4-223 |
| Cow position: | chr25:12817292-12817061 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 4-235 |
| Cow position: | chr25:6424671-6424905 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 66, 14 |
| Conread position: | 4-247 |
| Cow position: | chr25:448428-448680 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 217 |
| Conread position: | 4-251 |
| Cow position: | chr25:17354293-17354039 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 4-267 |
| Cow position: | chr25:18000613-18000883 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 167, 16 |
| Conread position: | 4-272 |
| Cow position: | chr25:26112184-26111921 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 148 |
| Conread position: | 4-288 |
| Cow position: | chr25:1838154-1837868 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 134 |
| Conread position: | 4-288 |
| Cow position: | chr25:35340247-35339960 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 4-289 |
| Cow position: | chr25:30319527-30319825 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 285 |
| Conread position: | 4-289 |
| Cow position: | chr25:36762023-36761740 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 218 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 14, 215 |
| Conread position: | 4-292 |
| Cow position: | chr25:1735397-1735689 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 4-295 |
| Cow position: | chr25:26087437-26087134 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 233 |
| Conread position: | 4-301 |
| Cow position: | chr25:5514927-5514620 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 160 |
| Conread position: | 4-303 |
| Cow position: | chr25:12360127-12359817 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 13, 286 |
| Conread position: | 4-303 |
| Cow position: | chr25:26654826-26654518 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 159 |
| Conread position: | 4-303 |
| Cow position: | chr25:41107673-41107371 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 214 |
| Conread position: | 4-314 |
| Cow position: | chr25:2110993-2110682 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 29 |
| Conread position: | 5-292 |
| Cow position: | chr25:6891609-6891906 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 281 |
| Conread position: | 5-309 |
| Cow position: | chr25:11956744-11956428 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 64, 157 |
| Conread position: | 7-254 |
| Cow position: | chr25:33256282-33256027 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 11, 153 |
| Conread position: | 7-289 |
| Cow position: | chr25:17658527-17658239 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 113 |
| Conread position: | 7-312 |
| Cow position: | chr25:20020079-20020368 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 11, 162 |
| Conread position: | 8-177 |
| Cow position: | chr25:24452255-24452434 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 10, 134 |
| Conread position: | 9-304 |
| Cow position: | chr25:11666566-11666275 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 9, 167 |
| Conread position: | 10-176 |
| Cow position: | chr25:33978304-33978466 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 10-267 |
| Cow position: | chr25:16064800-16064542 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 143 |
| Conread position: | 12-223 |
| Cow position: | chr25:18969184-18968960 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 14-313 |
| Cow position: | chr25:21193035-21193342 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 25 |
| Conread position: | 15-176 |
| Cow position: | chr25:26058493-26058320 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 15-292 |
| Cow position: | chr25:3145749-3145467 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 43, 111 |
| Conread position: | 17-169 |
| Cow position: | chr25:16400356-16400507 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 75 |
| Conread position: | 22-292 |
| Cow position: | chr25:1096476-1096198 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 265 |
| Conread position: | 25-303 |
| Cow position: | chr25:12234864-12235144 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 27-289 |
| Cow position: | chr25:13720645-13720916 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 88 |
| Conread position: | 33-292 |
| Cow position: | chr25:4488616-4488357 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 36, 163 |
| Conread position: | 34-218 |
| Cow position: | chr25:40321403-40321615 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 129 |
| Conread position: | 39-213 |
| Cow position: | chr25:16319249-16319428 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 31, 138 |
| Conread position: | 39-268 |
| Cow position: | chr25:26238752-26238512 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.