Cow genome map
| Conread name: | Ova1-OVRM10212D05 |
| Conread position: | 2-267 |
| Cow position: | chr27:18544030-18544308 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-164 |
| Cow position: | chr27:30814452-30814609 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 4-145 |
| Cow position: | chr27:29283371-29283220 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-153 |
| Cow position: | chr27:30844038-30843882 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-162 |
| Cow position: | chr27:20552728-20552564 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 28, 85 |
| Conread position: | 4-170 |
| Cow position: | chr27:27259646-27259821 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 14, 156 |
| Conread position: | 4-171 |
| Cow position: | chr27:20765924-20765749 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 4-180 |
| Cow position: | chr27:4812842-4812654 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 4-186 |
| Cow position: | chr27:20037088-20036896 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 4-197 |
| Cow position: | chr27:26441023-26440818 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 4-214 |
| Cow position: | chr27:26509123-26508904 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 12, 128 |
| Conread position: | 4-229 |
| Cow position: | chr27:12429438-12429684 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 14, 164 |
| Conread position: | 4-254 |
| Cow position: | chr27:20283680-20283920 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 193 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 4-288 |
| Cow position: | chr27:16292447-16292723 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 13, 79 |
| Conread position: | 4-288 |
| Cow position: | chr27:16786860-16787161 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 289 |
| Conread position: | 4-289 |
| Cow position: | chr27:1058645-1058353 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 61, 162 |
| Conread position: | 4-289 |
| Cow position: | chr27:17397413-17397124 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 13, 151 |
| Conread position: | 4-289 |
| Cow position: | chr27:27020065-27019773 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 196 |
| Conread position: | 4-290 |
| Cow position: | chr27:22549747-22549456 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 11, 159 |
| Conread position: | 4-303 |
| Cow position: | chr27:11435284-11434987 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 133 |
| Conread position: | 4-303 |
| Cow position: | chr27:25809485-25809179 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 156 |
| Conread position: | 4-306 |
| Cow position: | chr27:29399853-29400166 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 14, 145 |
| Conread position: | 4-307 |
| Cow position: | chr27:10307266-10306928 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 14, 307 |
| Conread position: | 4-310 |
| Cow position: | chr27:26428095-26427777 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 284 |
| Conread position: | 4-311 |
| Cow position: | chr27:10992391-10992718 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 243 |
| Conread position: | 5-177 |
| Cow position: | chr27:1183840-1183656 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 11, 115 |
| Conread position: | 5-289 |
| Cow position: | chr27:30582778-30583067 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 184 |
| Conread position: | 6-292 |
| Cow position: | chr27:25982672-25982383 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 6, 159 |
| Conread position: | 7-177 |
| Cow position: | chr27:26218747-26218915 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 11, 152 |
| Conread position: | 7-180 |
| Cow position: | chr27:2592589-2592764 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 11, 83 |
| Conread position: | 7-181 |
| Cow position: | chr27:26625166-26625349 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 11, 164 |
| Conread position: | 7-225 |
| Cow position: | chr27:2643885-2643670 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 76 |
| Conread position: | 7-234 |
| Cow position: | chr27:28518330-28518554 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 149 |
| Conread position: | 7-247 |
| Cow position: | chr27:26919867-26919623 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 11, 68 |
| Conread position: | 7-287 |
| Cow position: | chr27:12278228-12277951 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 10, 139 |
| Conread position: | 9-289 |
| Cow position: | chr27:22440179-22440472 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 9-301 |
| Cow position: | chr27:13317916-13317621 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 8, 174 |
| Conread position: | 10-153 |
| Cow position: | chr27:28001766-28001622 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 8, 52 |
| Conread position: | 15-170 |
| Cow position: | chr27:17926582-17926424 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 57, 139 |
| Conread position: | 16-292 |
| Cow position: | chr27:26796035-26796312 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 59 |
| Conread position: | 17-302 |
| Cow position: | chr27:6523094-6523399 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 50, 278 |
| Conread position: | 21-176 |
| Cow position: | chr27:27632554-27632390 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 24-272 |
| Cow position: | chr27:16099967-16099702 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 41-199 |
| Cow position: | chr27:22220625-22220796 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 43-165 |
| Cow position: | chr27:10275611-10275491 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 71-288 |
| Cow position: | chr27:15312317-15312529 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 6, 0 |
Show alignments to all cow chromosomes.