Cow genome map
| Conread name: | Ova1-OVRM10212D05 |
| Conread position: | 1-175 |
| Cow position: | chr29:37599287-37599467 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 17, 156 |
| Conread position: | 2-289 |
| Cow position: | chr29:6925931-6925643 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 2-292 |
| Cow position: | chr29:44901785-44902080 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 115 |
| Conread position: | 3-147 |
| Cow position: | chr29:6286240-6286393 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 4-137 |
| Cow position: | chr29:3711307-3711161 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-146 |
| Cow position: | chr29:34744699-34744851 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 4-148 |
| Cow position: | chr29:21706472-21706611 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 62 |
| Conread position: | 4-164 |
| Cow position: | chr29:13458976-13458810 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 156 |
| Conread position: | 4-169 |
| Cow position: | chr29:32767606-32767774 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 153 |
| Conread position: | 4-170 |
| Cow position: | chr29:16756976-16756797 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 39 |
| Conread position: | 4-171 |
| Cow position: | chr29:35738348-35738529 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-239 |
| Cow position: | chr29:20626493-20626250 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 13, 155 |
| Conread position: | 4-246 |
| Cow position: | chr29:20178208-20178463 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 141 |
| Conread position: | 4-250 |
| Cow position: | chr29:36586495-36586242 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 4-288 |
| Cow position: | chr29:28195596-28195893 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 4-290 |
| Cow position: | chr29:18212074-18212352 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 53 |
| Conread position: | 4-292 |
| Cow position: | chr29:19762193-19761897 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 4-292 |
| Cow position: | chr29:24952605-24952309 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 4-292 |
| Cow position: | chr29:27833906-27833609 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 281 |
| Conread position: | 4-299 |
| Cow position: | chr29:32799791-32800092 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 69 |
| Conread position: | 4-303 |
| Cow position: | chr29:19756364-19756056 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 4-303 |
| Cow position: | chr29:28868553-28868241 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 4-303 |
| Cow position: | chr29:35281414-35281114 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 143 |
| Conread position: | 5-289 |
| Cow position: | chr29:35292006-35291723 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 7-153 |
| Cow position: | chr29:25474834-25474666 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 7-176 |
| Cow position: | chr29:16195764-16195588 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 7-229 |
| Cow position: | chr29:4328338-4328117 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 7-272 |
| Cow position: | chr29:45650429-45650698 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 132 |
| Conread position: | 7-288 |
| Cow position: | chr29:43495968-43495696 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 9-204 |
| Cow position: | chr29:6844716-6844921 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 9, 152 |
| Conread position: | 9-290 |
| Cow position: | chr29:31926377-31926667 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 112 |
| Conread position: | 10-303 |
| Cow position: | chr29:87105-87402 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 130 |
| Conread position: | 11-148 |
| Cow position: | chr29:24292781-24292639 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 79 |
| Conread position: | 15-176 |
| Cow position: | chr29:12784051-12784220 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 15-247 |
| Cow position: | chr29:8630168-8630406 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 225 |
| Conread position: | 15-291 |
| Cow position: | chr29:38910094-38910381 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 269 |
| Conread position: | 16-220 |
| Cow position: | chr29:22721036-22720823 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 116 |
| Conread position: | 16-289 |
| Cow position: | chr29:36217021-36216744 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 16 |
| Conread position: | 21-292 |
| Cow position: | chr29:686291-686569 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 139 |
| Conread position: | 25-292 |
| Cow position: | chr29:17543346-17543076 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 248 |
Show alignments to all cow chromosomes.