Cow genome map


           Conread name:
           Ova1-OVRM10212D05
        

               Conread position:
               1-163
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               17, 154
               

               Conread position:
               2-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               16, 68
               

               Conread position:
               2-203
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               16, 166
               

               Conread position:
               2-289
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 286
               

               Conread position:
               3-181
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               15, 176
               

               Conread position:
               3-233
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 37
               

               Conread position:
               3-289
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               15, 96
               

               Conread position:
               4-151
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-161
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               14, 75
               

               Conread position:
               4-162
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-162
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               14, 85
               

               Conread position:
               4-167
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-174
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               13, 76
               

               Conread position:
               4-176
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 130
               

               Conread position:
               4-176
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 69
               

               Conread position:
               4-176
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               14, 153
               

               Conread position:
               4-176
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 121
               

               Conread position:
               4-177
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 60
               

               Conread position:
               4-177
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-180
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-186
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               4-193
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               14, 149
               

               Conread position:
               4-195
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               14, 185
               

               Conread position:
               4-216
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               28, 216
               

               Conread position:
               4-226
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               4-229
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               4-229
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               4-230
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               6, 62
               

               Conread position:
               4-240
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 198
               

               Conread position:
               4-251
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 157
               

               Conread position:
               4-270
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 150
               

               Conread position:
               4-282
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 140
               

               Conread position:
               4-287
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 148
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 190
               

               Conread position:
               4-290
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 66
               

               Conread position:
               4-291
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               4-291
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 81
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 155
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 283
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               14, 192
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 165
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               4-300
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 81
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               14, 211
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 279
               

               Conread position:
               4-304
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               58, 119
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 207
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               5-292
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 149
               

               Conread position:
               7-147
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               11, 64
               

               Conread position:
               7-172
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               7-236
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 75
               

               Conread position:
               7-252
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 109
               

               Conread position:
               7-272
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               7-288
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 278
               

               Conread position:
               7-289
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 33
               

               Conread position:
               7-304
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               8-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               8-250
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               10, 36
               

               Conread position:
               9-211
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               23, 60
               

               Conread position:
               9-303
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 129
               

               Conread position:
               10-166
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               15-170
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 69
               

               Conread position:
               15-289
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 74
               

               Conread position:
               16-188
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               17-180
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               15, 77
               

               Conread position:
               21-181
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               25-177
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               25-303
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 131
               

               Conread position:
               29-176
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               33-252
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 162
               

               Conread position:
               39-166
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               75-288
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.