Cow genome map


           Conread name:
           Ova1-OVRM10212D05
        

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-292
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 91
               

               Conread position:
               2-218
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               16, 40
               

               Conread position:
               2-289
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 72
               

               Conread position:
               3-176
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 22
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 134
               

               Conread position:
               3-301
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 285
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               228
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 281
               

               Conread position:
               4-146
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-148
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-152
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-168
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               4-168
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 86
               

               Conread position:
               4-173
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               14, 56
               

               Conread position:
               4-174
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-176
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               4-176
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-177
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               14, 60
               

               Conread position:
               4-178
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               4-180
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               4-190
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 118
               

               Conread position:
               4-228
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-239
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               4-239
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               14, 97
               

               Conread position:
               4-240
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               9, 159
               

               Conread position:
               4-247
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-247
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               13, 223
               

               Conread position:
               4-270
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-272
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               4-272
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 208
               

               Conread position:
               4-287
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 151
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 163
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 152
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 49
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               19, 280
               

               Conread position:
               4-301
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 151
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               67, 140
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 199
               

               Conread position:
               4-310
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 102
               

               Conread position:
               4-339
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 152
               

               Conread position:
               5-322
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 20
               

               Conread position:
               7-152
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               7-162
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               7-176
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               7-180
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               11, 174
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               7-226
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               7-289
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 175
               

               Conread position:
               7-303
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 281
               

               Conread position:
               7-304
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               9-203
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               60, 11
               

               Conread position:
               9-234
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               9-251
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 238
               

               Conread position:
               9-272
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               9-288
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               9, 78
               

               Conread position:
               9-289
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 267
               

               Conread position:
               9-307
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               10-180
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               10-289
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               60, 167
               

               Conread position:
               10-289
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 280
               

               Conread position:
               15-249
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               15-303
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 75
               

               Conread position:
               15-309
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               52, 277
               

               Conread position:
               16-153
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               50, 23
               

               Conread position:
               16-240
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 23
               

               Conread position:
               16-272
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 140
               

               Conread position:
               17-213
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               17-213
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               21-289
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 157
               

               Conread position:
               21-301
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               32-289
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               37, 98
               

               Conread position:
               40-303
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               16, 48
               

               Conread position:
               61-287
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               7, 0
               
Show alignments to all cow chromosomes.