Cow genome map

Conread name: Ova1-OVRM10212D05

Conread position: 1-301
Cow position: chr7:32824290-32824596 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 158

Conread position: 1-302
Cow position: chr7:21240150-21240455 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 192
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 15, 154

Conread position: 1-307
Cow position: chr7:34433315-34433629 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 133

Conread position: 2-251
Cow position: chr7:46116686-46116948 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 33

Conread position: 2-289
Cow position: chr7:54090173-54089870 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 157

Conread position: 3-176
Cow position: chr7:63023101-63022919 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 3-190
Cow position: chr7:31315274-31315088 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 14, 37

Conread position: 3-208
Cow position: chr7:48899882-48900085 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 67, 22

Conread position: 4-119
Cow position: chr7:1376101-1375983 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 36

Conread position: 4-129
Cow position: chr7:61790394-61790529 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 114
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 4-147
Cow position: chr7:6077749-6077905 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 4-148
Cow position: chr7:64135504-64135657 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 4-160
Cow position: chr7:255851-256012 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 14, 152

Conread position: 4-161
Cow position: chr7:39144648-39144485 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 14, 146

Conread position: 4-162
Cow position: chr7:44986612-44986451 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 0

Conread position: 4-164
Cow position: chr7:63946623-63946780 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 22

Conread position: 4-165
Cow position: chr7:3026756-3026933 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 4-176
Cow position: chr7:25867546-25867726 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 146
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 4-176
Cow position: chr7:37455281-37455101 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 4-176
Cow position: chr7:45747884-45748053 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 35

Conread position: 4-176
Cow position: chr7:62553397-62553222 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 36

Conread position: 4-186
Cow position: chr7:42460391-42460203 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 84

Conread position: 4-201
Cow position: chr7:58862926-58863126 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 136

Conread position: 4-210
Cow position: chr7:11160036-11160256 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 4-213
Cow position: chr7:65689569-65689788 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 14, 29

Conread position: 4-214
Cow position: chr7:24220631-24220413 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 14, 71

Conread position: 4-232
Cow position: chr7:21650063-21649826 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 29

Conread position: 4-235
Cow position: chr7:4892827-4892582 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 0

Conread position: 4-250
Cow position: chr7:39518260-39518006 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 4-251
Cow position: chr7:22727847-22727594 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 65, 128

Conread position: 4-252
Cow position: chr7:62733145-62732890 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 13, 144

Conread position: 4-254
Cow position: chr7:9075016-9074757 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 4-264
Cow position: chr7:13593727-13593466 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 69

Conread position: 4-269
Cow position: chr7:61601417-61601682 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 214
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 13, 160

Conread position: 4-276
Cow position: chr7:15654113-15654396 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 165

Conread position: 4-285
Cow position: chr7:35286677-35286941 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 14, 143

Conread position: 4-288
Cow position: chr7:20780113-20779808 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 151

Conread position: 4-289
Cow position: chr7:4418501-4418791 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 183

Conread position: 4-289
Cow position: chr7:4582767-4583067 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 14, 287

Conread position: 4-289
Cow position: chr7:11869878-11870158 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 98

Conread position: 4-289
Cow position: chr7:12212641-12212947 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 12, 236

Conread position: 4-289
Cow position: chr7:35652114-35652408 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 161

Conread position: 4-289
Cow position: chr7:40710073-40709777 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 120

Conread position: 4-289
Cow position: chr7:41299472-41299754 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 70

Conread position: 4-289
Cow position: chr7:45158087-45157801 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 91

Conread position: 4-289
Cow position: chr7:49648325-49648031 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 39

Conread position: 4-289
Cow position: chr7:64364566-64364859 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 14, 21

Conread position: 4-292
Cow position: chr7:25512162-25512456 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 278

Conread position: 4-292
Cow position: chr7:39930252-39929945 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 4-292
Cow position: chr7:48020381-48020095 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 36

Conread position: 4-301
Cow position: chr7:40571233-40570924 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 284

Conread position: 4-303
Cow position: chr7:9193283-9193587 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 89

Conread position: 4-303
Cow position: chr7:25415360-25415053 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 194

Conread position: 4-303
Cow position: chr7:26838617-26838308 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 97

Conread position: 4-303
Cow position: chr7:49820627-49820927 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 14, 158

Conread position: 4-303
Cow position: chr7:53772370-53772653 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 36

Conread position: 4-303
Cow position: chr7:63085521-63085219 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 192

Conread position: 4-304
Cow position: chr7:54583635-54583336 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 147

Conread position: 4-307
Cow position: chr7:24932455-24932744 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 155

Conread position: 4-311
Cow position: chr7:52718674-52718995 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 29

Conread position: 4-331
Cow position: chr7:14187274-14187614 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 285

Conread position: 4-334
Cow position: chr7:19267408-19267742 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 280

Conread position: 5-181
Cow position: chr7:37952143-37951955 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 159

Conread position: 6-303
Cow position: chr7:18873171-18872867 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 277

Conread position: 7-147
Cow position: chr7:37697760-37697612 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 7-148
Cow position: chr7:14029291-14029143 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 128
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 33

Conread position: 7-160
Cow position: chr7:68173195-68173358 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 154

Conread position: 7-171
Cow position: chr7:39451180-39451346 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 15

Conread position: 7-175
Cow position: chr7:19230553-19230721 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 109

Conread position: 7-201
Cow position: chr7:52776796-52776999 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 10, 147

Conread position: 7-207
Cow position: chr7:26911483-26911686 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 165
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 188

Conread position: 7-213
Cow position: chr7:11066433-11066216 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 139

Conread position: 7-228
Cow position: chr7:11176749-11176978 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 9

Conread position: 7-231
Cow position: chr7:40067617-40067374 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 7-292
Cow position: chr7:268952-268661 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 133

Conread position: 7-292
Cow position: chr7:3729049-3728759 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 193

Conread position: 9-211
Cow position: chr7:54783864-54784062 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 9-219
Cow position: chr7:25393245-25393026 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 135

Conread position: 9-272
Cow position: chr7:46823625-46823362 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 10, 171

Conread position: 10-292
Cow position: chr7:53361423-53361715 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 275

Conread position: 10-308
Cow position: chr7:44589896-44590193 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 30

Conread position: 15-303
Cow position: chr7:20035307-20035607 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 268

Conread position: 15-303
Cow position: chr7:53989001-53988714 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 24

Conread position: 17-161
Cow position: chr7:38429914-38429757 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 18-289
Cow position: chr7:2172699-2172425 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 258

Conread position: 20-181
Cow position: chr7:19896868-19897028 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 50

Conread position: 20-193
Cow position: chr7:58428022-58427858 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 145
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 21-292
Cow position: chr7:64949055-64948781 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 18

Conread position: 32-197
Cow position: chr7:40894457-40894279 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 32-303
Cow position: chr7:59438402-59438128 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 37, 9

Conread position: 39-169
Cow position: chr7:32221934-32221804 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 39-250
Cow position: chr7:17950784-17950575 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 24

Conread position: 39-308
Cow position: chr7:68772593-68772856 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 178
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 57

Conread position: 75-306
Cow position: chr7:10588998-10588770 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 219, 137

Show alignments to all cow chromosomes.