Cow genome map

Conread name: Ova1-OVRM10212D05

Conread position: 2-160
Cow position: chr8:23030357-23030200 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 77

Conread position: 2-208
Cow position: chr8:42135420-42135635 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 2-268
Cow position: chr8:21206813-21206544 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 16, 142

Conread position: 2-287
Cow position: chr8:24235063-24234771 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 162

Conread position: 2-292
Cow position: chr8:25591753-25591453 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 282

Conread position: 3-272
Cow position: chr8:3147615-3147906 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 21

Conread position: 4-137
Cow position: chr8:30893075-30893212 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 113

Conread position: 4-140
Cow position: chr8:37148050-37147903 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 4-148
Cow position: chr8:669640-669790 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 4-148
Cow position: chr8:20102842-20102996 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 4-148
Cow position: chr8:35504307-35504460 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 29

Conread position: 4-148
Cow position: chr8:36465136-36464981 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 4-151
Cow position: chr8:20926711-20926864 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 4-160
Cow position: chr8:54031803-54031642 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 155

Conread position: 4-167
Cow position: chr8:54178002-54177835 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 39

Conread position: 4-169
Cow position: chr8:1023894-1023715 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 161

Conread position: 4-176
Cow position: chr8:16093205-16093027 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 36

Conread position: 4-180
Cow position: chr8:37571774-37571964 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 128

Conread position: 4-181
Cow position: chr8:13221921-13222099 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 13

Conread position: 4-181
Cow position: chr8:34400874-34400690 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 14, 69

Conread position: 4-196
Cow position: chr8:53383328-53383134 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 163
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 13, 35

Conread position: 4-203
Cow position: chr8:47461798-47461585 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 0

Conread position: 4-208
Cow position: chr8:24201835-24201619 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 36

Conread position: 4-217
Cow position: chr8:19642400-19642177 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 4-232
Cow position: chr8:39321245-39321020 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 66

Conread position: 4-236
Cow position: chr8:4940380-4940622 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 22

Conread position: 4-237
Cow position: chr8:8924420-8924658 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 190

Conread position: 4-251
Cow position: chr8:5177114-5176865 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 14, 209

Conread position: 4-270
Cow position: chr8:20837054-20836781 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 4-289
Cow position: chr8:1187848-1187574 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 82

Conread position: 4-289
Cow position: chr8:11078799-11078505 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 280

Conread position: 4-289
Cow position: chr8:12058651-12058350 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 159

Conread position: 4-289
Cow position: chr8:21961178-21960887 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 138

Conread position: 4-289
Cow position: chr8:29765186-29764892 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 281

Conread position: 4-289
Cow position: chr8:45689973-45690242 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 27, 89

Conread position: 4-290
Cow position: chr8:39144679-39144406 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 4-290
Cow position: chr8:60488697-60488992 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 4-292
Cow position: chr8:1834851-1834542 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 242

Conread position: 4-292
Cow position: chr8:10802235-10802531 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 215

Conread position: 4-292
Cow position: chr8:31253741-31253442 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 283

Conread position: 4-292
Cow position: chr8:47861011-47861299 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 4-301
Cow position: chr8:1252883-1252579 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 44

Conread position: 4-303
Cow position: chr8:18017447-18017147 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 176

Conread position: 4-309
Cow position: chr8:3704549-3704238 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 277

Conread position: 5-134
Cow position: chr8:24328918-24329057 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 5-172
Cow position: chr8:22755946-22755776 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 12, 28

Conread position: 5-303
Cow position: chr8:61098115-61098422 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 21, 9

Conread position: 7-148
Cow position: chr8:50310928-50311072 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 10, 69

Conread position: 7-180
Cow position: chr8:32719898-32719726 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 13

Conread position: 7-287
Cow position: chr8:18989903-18990193 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 11, 279

Conread position: 7-289
Cow position: chr8:9917806-9917527 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 37

Conread position: 7-289
Cow position: chr8:55726348-55726627 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 93

Conread position: 7-290
Cow position: chr8:24390272-24390558 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 155

Conread position: 7-292
Cow position: chr8:21826826-21827110 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 144

Conread position: 8-181
Cow position: chr8:44437691-44437510 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 149
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 10, 0

Conread position: 9-176
Cow position: chr8:44664653-44664836 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 24

Conread position: 9-287
Cow position: chr8:53429699-53429416 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 17, 139

Conread position: 10-295
Cow position: chr8:45878962-45878679 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 58

Conread position: 10-295
Cow position: chr8:45925544-45925261 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 58

Conread position: 11-176
Cow position: chr8:7149771-7149938 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 84

Conread position: 12-190
Cow position: chr8:6816748-6816938 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 5, 152

Conread position: 15-174
Cow position: chr8:17180108-17180276 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 15-272
Cow position: chr8:10786392-10786129 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 226

Conread position: 18-268
Cow position: chr8:3891511-3891773 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 22-289
Cow position: chr8:53320891-53320612 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 266

Conread position: 25-230
Cow position: chr8:19204740-19204950 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 43, 64

Conread position: 139-303
Cow position: chr8:37217299-37217460 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 128, 53

Show alignments to all cow chromosomes.