Cow genome map
| Conread name: | Ova1-OVRM10218A03 |
| Conread position: | 182-594 |
| Cow position: | chr11:16262487-16262060 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 270 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 76, 6 |
| Conread position: | 200-599 |
| Cow position: | chr11:8232984-8232597 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 58, 144 |
| Conread position: | 204-596 |
| Cow position: | chr11:34023423-34023842 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 55, 47 |
| Conread position: | 206-595 |
| Cow position: | chr11:2309456-2309838 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 273 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 45, 118 |
| Conread position: | 207-543 |
| Cow position: | chr11:37118066-37118406 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 136 |
| Conread position: | 208-581 |
| Cow position: | chr11:70399423-70399817 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 37, 184 |
| Conread position: | 208-599 |
| Cow position: | chr11:27681085-27681471 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 37, 114 |
| Conread position: | 210-594 |
| Cow position: | chr11:23138484-23138089 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 212-585 |
| Cow position: | chr11:10094931-10095303 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 251 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 47, 100 |
| Conread position: | 215-587 |
| Cow position: | chr11:65970044-65970420 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 267 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 42, 135 |
| Conread position: | 216-588 |
| Cow position: | chr11:27462816-27462430 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 29, 169 |
| Conread position: | 224-599 |
| Cow position: | chr11:33413833-33414207 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 21, 114 |
| Conread position: | 230-589 |
| Cow position: | chr11:42358731-42359073 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 31, 107 |
| Conread position: | 231-527 |
| Cow position: | chr11:37995517-37995235 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 231-594 |
| Cow position: | chr11:9222133-9221761 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 241-555 |
| Cow position: | chr11:4435945-4436255 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 7, 20 |
| Conread position: | 247-590 |
| Cow position: | chr11:41239648-41239309 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 11, 101 |
| Conread position: | 249-572 |
| Cow position: | chr11:40467496-40467172 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 9, 97 |
| Conread position: | 249-596 |
| Cow position: | chr11:59366453-59366109 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 12, 79 |
| Conread position: | 250-522 |
| Cow position: | chr11:75510626-75510336 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 8, 139 |
| Conread position: | 253-573 |
| Cow position: | chr11:68571037-68570719 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 5, 85 |
| Conread position: | 256-526 |
| Cow position: | chr11:44576100-44575836 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 195, 69 |
| Conread position: | 257-586 |
| Cow position: | chr11:8495677-8496002 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 195, 74 |
| Conread position: | 257-586 |
| Cow position: | chr11:77241001-77241330 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 83, 138 |
| Conread position: | 257-591 |
| Cow position: | chr11:61202793-61203127 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 125, 77 |
| Conread position: | 260-509 |
| Cow position: | chr11:22504868-22505126 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 10 |
| Conread position: | 260-589 |
| Cow position: | chr11:54333974-54334295 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 11, 72 |
| Conread position: | 261-501 |
| Cow position: | chr11:27242873-27243107 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 70, 20 |
| Conread position: | 261-504 |
| Cow position: | chr11:55117117-55117350 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 189, 64 |
| Conread position: | 261-522 |
| Cow position: | chr11:48428726-48428977 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 257, 114 |
| Conread position: | 261-525 |
| Cow position: | chr11:18389217-18388963 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 261-527 |
| Cow position: | chr11:33935107-33934832 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 64, 125 |
| Conread position: | 261-532 |
| Cow position: | chr11:25861941-25861655 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 71, 9 |
| Conread position: | 261-552 |
| Cow position: | chr11:77764092-77763807 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 176, 81 |
| Conread position: | 261-566 |
| Cow position: | chr11:8841099-8840806 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 192, 83 |
| Conread position: | 261-571 |
| Cow position: | chr11:43897779-43898084 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 192, 71 |
| Conread position: | 261-572 |
| Cow position: | chr11:68207204-68206899 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 125 |
| Conread position: | 261-576 |
| Cow position: | chr11:29947293-29946980 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 257, 63 |
| Conread position: | 261-576 |
| Cow position: | chr11:31352927-31352618 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 189, 58 |
| Conread position: | 261-577 |
| Cow position: | chr11:10076418-10076718 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 240, 76 |
| Conread position: | 261-583 |
| Cow position: | chr11:17228017-17227695 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 61, 123 |
| Conread position: | 261-586 |
| Cow position: | chr11:30879321-30879635 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 189, 70 |
| Conread position: | 261-590 |
| Cow position: | chr11:4323010-4323318 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 242, 81 |
| Conread position: | 261-590 |
| Cow position: | chr11:40819001-40818675 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 123, 72 |
| Conread position: | 261-594 |
| Cow position: | chr11:17112983-17112667 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 244, 81 |
| Conread position: | 261-595 |
| Cow position: | chr11:19890528-19890830 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 261-596 |
| Cow position: | chr11:11752871-11752548 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 77 |
| Conread position: | 261-600 |
| Cow position: | chr11:42232256-42232579 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 246 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 250, 73 |
| Conread position: | 261-601 |
| Cow position: | chr11:43526513-43526152 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 252 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 29, 217 |
| Conread position: | 262-527 |
| Cow position: | chr11:50236324-50236064 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 194, 80 |
| Conread position: | 262-569 |
| Cow position: | chr11:46474047-46473738 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 86 |
| Conread position: | 262-576 |
| Cow position: | chr11:62979122-62979438 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 192, 68 |
| Conread position: | 262-577 |
| Cow position: | chr11:77705409-77705706 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 214, 62 |
| Conread position: | 262-589 |
| Cow position: | chr11:54856279-54856589 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 150, 80 |
| Conread position: | 262-594 |
| Cow position: | chr11:43644456-43644135 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 133, 69 |
| Conread position: | 263-578 |
| Cow position: | chr11:14941954-14941643 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 160, 112 |
| Conread position: | 264-586 |
| Cow position: | chr11:63508085-63508386 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 264, 65 |
| Conread position: | 270-571 |
| Cow position: | chr11:41812259-41811967 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 180, 72 |
| Conread position: | 271-513 |
| Cow position: | chr11:70619708-70619937 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 213, 58 |
| Conread position: | 274-509 |
| Cow position: | chr11:40145148-40144922 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 176, 45 |
| Conread position: | 274-538 |
| Cow position: | chr11:2568463-2568735 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 61, 109 |
| Conread position: | 274-555 |
| Cow position: | chr11:38235894-38236172 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 274-577 |
| Cow position: | chr11:53130472-53130762 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 221, 48 |
| Conread position: | 274-577 |
| Cow position: | chr11:58614310-58614614 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 48 |
| Conread position: | 274-586 |
| Cow position: | chr11:46398779-46399086 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 48 |
| Conread position: | 274-586 |
| Cow position: | chr11:58588000-58588306 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 185, 63 |
| Conread position: | 275-589 |
| Cow position: | chr11:10302549-10302227 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 56, 108 |
| Conread position: | 276-591 |
| Cow position: | chr11:16251595-16251282 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 174, 69 |
| Conread position: | 277-586 |
| Cow position: | chr11:58459779-58460071 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 277-587 |
| Cow position: | chr11:22978203-22977913 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 277-590 |
| Cow position: | chr11:9253367-9253055 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 182, 17 |
| Conread position: | 279-578 |
| Cow position: | chr11:41577343-41577062 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 239, 40 |
| Conread position: | 283-583 |
| Cow position: | chr11:9837437-9837143 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 9, 45 |
| Conread position: | 306-494 |
| Cow position: | chr11:63166482-63166295 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 144, 25 |
| Conread position: | 308-443 |
| Cow position: | chr11:46952493-46952628 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 312-588 |
| Cow position: | chr11:18244257-18243975 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 124, 17 |
| Conread position: | 318-583 |
| Cow position: | chr11:1362793-1362519 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 59 |
| Conread position: | 323-490 |
| Cow position: | chr11:51020011-51020183 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 53 |
| Conread position: | 330-586 |
| Cow position: | chr11:18572503-18572760 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 331-566 |
| Cow position: | chr11:20761547-20761786 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 74, 60 |
| Conread position: | 331-577 |
| Cow position: | chr11:13039429-13039193 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 59 |
| Conread position: | 331-586 |
| Cow position: | chr11:45898355-45898094 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 30, 75 |
| Conread position: | 331-590 |
| Cow position: | chr11:18484458-18484209 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 331-600 |
| Cow position: | chr11:34121458-34121736 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 123, 265 |
| Conread position: | 331-600 |
| Cow position: | chr11:37160492-37160760 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 108, 45 |
| Conread position: | 331-600 |
| Cow position: | chr11:41271840-41272110 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 119, 23 |
| Conread position: | 332-591 |
| Cow position: | chr11:21894452-21894194 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 46 |
| Conread position: | 332-594 |
| Cow position: | chr11:49935041-49934766 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 335-600 |
| Cow position: | chr11:18145099-18144845 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 338-555 |
| Cow position: | chr11:32595174-32595397 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 5, 38 |
| Conread position: | 338-594 |
| Cow position: | chr11:77682888-77683135 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 173, 38 |
| Conread position: | 341-527 |
| Cow position: | chr11:37991831-37991650 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 140, 11 |
| Conread position: | 342-594 |
| Cow position: | chr11:11125375-11125628 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 176, 235 |
| Conread position: | 345-576 |
| Cow position: | chr11:53719661-53719893 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 121, 31 |
| Conread position: | 345-585 |
| Cow position: | chr11:75255152-75255387 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 117, 101 |
| Conread position: | 345-586 |
| Cow position: | chr11:63847567-63847806 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 122, 31 |
| Conread position: | 345-587 |
| Cow position: | chr11:26483435-26483674 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 150, 31 |
| Conread position: | 345-591 |
| Cow position: | chr11:56797023-56796778 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 160, 86 |
| Conread position: | 345-600 |
| Cow position: | chr11:12950225-12949972 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 109, 9 |
| Conread position: | 346-555 |
| Cow position: | chr11:34615985-34616197 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 152, 31 |
| Conread position: | 346-570 |
| Cow position: | chr11:13190936-13191169 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 107, 50 |
| Conread position: | 346-576 |
| Cow position: | chr11:74929497-74929733 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 107, 30 |
| Conread position: | 346-586 |
| Cow position: | chr11:18509292-18509057 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 141, 29 |
| Conread position: | 346-590 |
| Cow position: | chr11:6835244-6835494 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 107, 175 |
| Conread position: | 346-591 |
| Cow position: | chr11:2092064-2092298 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 221, 29 |
| Conread position: | 346-599 |
| Cow position: | chr11:46247162-46247425 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 348-578 |
| Cow position: | chr11:47169283-47169053 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 59, 28 |
| Conread position: | 349-580 |
| Cow position: | chr11:67951241-67951009 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 353-577 |
| Cow position: | chr11:19508020-19508246 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 165, 88 |
| Conread position: | 353-584 |
| Cow position: | chr11:1668398-1668634 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 353-588 |
| Cow position: | chr11:48901354-48901120 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 353-600 |
| Cow position: | chr11:14308362-14308610 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 88, 19 |
| Conread position: | 354-577 |
| Cow position: | chr11:377926-377694 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 224 |
| Conread position: | 355-594 |
| Cow position: | chr11:43646692-43646447 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 355-600 |
| Cow position: | chr11:15125254-15125006 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 155, 21 |
| Conread position: | 356-583 |
| Cow position: | chr11:68422807-68423030 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 144, 29 |
| Conread position: | 356-598 |
| Cow position: | chr11:47193250-47193495 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 20 |
| Conread position: | 356-600 |
| Cow position: | chr11:16000655-16000900 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 89, 14 |
| Conread position: | 358-585 |
| Cow position: | chr11:66265335-66265558 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 152, 18 |
| Conread position: | 365-573 |
| Cow position: | chr11:65956032-65955813 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 372-588 |
| Cow position: | chr11:63516565-63516789 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 375-600 |
| Cow position: | chr11:32439204-32438980 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 46, 86 |
| Conread position: | 376-586 |
| Cow position: | chr11:75748180-75748393 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 378-584 |
| Cow position: | chr11:34032450-34032244 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 123, 74 |
| Conread position: | 378-594 |
| Cow position: | chr11:32071895-32072117 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 76, 59 |
| Conread position: | 380-594 |
| Cow position: | chr11:64904745-64904963 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 67, 208 |
| Conread position: | 396-588 |
| Cow position: | chr11:62808883-62808690 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 103, 187 |
| Conread position: | 398-584 |
| Cow position: | chr11:33348417-33348224 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 403-599 |
| Cow position: | chr11:20422440-20422251 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 404-571 |
| Cow position: | chr11:47903625-47903798 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 5 |
| Conread position: | 421-591 |
| Cow position: | chr11:876890-877066 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 441-600 |
| Cow position: | chr11:55821895-55821732 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 141 |
| Conread position: | 447-600 |
| Cow position: | chr11:78543752-78543907 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 56, 141 |
| Conread position: | 450-600 |
| Cow position: | chr11:69402427-69402277 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 143, 127 |
Show alignments to all cow chromosomes.