Cow genome map

Conread name: Ova1-OVRM10218A03

Conread position: 182-594
Cow position:
Alignm length: 433
Alignm identity: 270
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 6

Conread position: 200-599
Cow position:
Alignm length: 412
Alignm identity: 287
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 58, 144

Conread position: 204-596
Cow position:
Alignm length: 423
Alignm identity: 286
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 55, 47

Conread position: 206-595
Cow position:
Alignm length: 399
Alignm identity: 273
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 45, 118

Conread position: 207-543
Cow position:
Alignm length: 354
Alignm identity: 237
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 136

Conread position: 208-581
Cow position:
Alignm length: 399
Alignm identity: 267
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 37, 184

Conread position: 208-599
Cow position:
Alignm length: 405
Alignm identity: 276
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 114

Conread position: 210-594
Cow position:
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 11

Conread position: 212-585
Cow position:
Alignm length: 387
Alignm identity: 251
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 47, 100

Conread position: 215-587
Cow position:
Alignm length: 390
Alignm identity: 267
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 42, 135

Conread position: 216-588
Cow position:
Alignm length: 394
Alignm identity: 259
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 169

Conread position: 224-599
Cow position:
Alignm length: 395
Alignm identity: 269
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 21, 114

Conread position: 230-589
Cow position:
Alignm length: 366
Alignm identity: 242
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 107

Conread position: 231-527
Cow position:
Alignm length: 303
Alignm identity: 204
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 72

Conread position: 231-594
Cow position:
Alignm length: 377
Alignm identity: 248
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 19, 35

Conread position: 241-555
Cow position:
Alignm length: 320
Alignm identity: 220
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 7, 20

Conread position: 247-590
Cow position:
Alignm length: 358
Alignm identity: 236
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 101

Conread position: 249-572
Cow position:
Alignm length: 338
Alignm identity: 231
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 9, 97

Conread position: 249-596
Cow position:
Alignm length: 359
Alignm identity: 240
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 79

Conread position: 250-522
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 139

Conread position: 253-573
Cow position:
Alignm length: 333
Alignm identity: 220
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 5, 85

Conread position: 256-526
Cow position:
Alignm length: 278
Alignm identity: 190
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 195, 69

Conread position: 257-586
Cow position:
Alignm length: 340
Alignm identity: 222
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 195, 74

Conread position: 257-586
Cow position:
Alignm length: 341
Alignm identity: 227
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 83, 138

Conread position: 257-591
Cow position:
Alignm length: 343
Alignm identity: 237
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 125, 77

Conread position: 260-509
Cow position:
Alignm length: 262
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 10

Conread position: 260-589
Cow position:
Alignm length: 335
Alignm identity: 225
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 11, 72

Conread position: 261-501
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 20

Conread position: 261-504
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 189, 64

Conread position: 261-522
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 257, 114

Conread position: 261-525
Cow position:
Alignm length: 272
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 35

Conread position: 261-527
Cow position:
Alignm length: 281
Alignm identity: 192
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 64, 125

Conread position: 261-532
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 71, 9

Conread position: 261-552
Cow position:
Alignm length: 299
Alignm identity: 199
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 176, 81

Conread position: 261-566
Cow position:
Alignm length: 310
Alignm identity: 209
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 192, 83

Conread position: 261-571
Cow position:
Alignm length: 317
Alignm identity: 212
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 192, 71

Conread position: 261-572
Cow position:
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 125

Conread position: 261-576
Cow position:
Alignm length: 320
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 257, 63

Conread position: 261-576
Cow position:
Alignm length: 325
Alignm identity: 218
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 189, 58

Conread position: 261-577
Cow position:
Alignm length: 322
Alignm identity: 218
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 240, 76

Conread position: 261-583
Cow position:
Alignm length: 335
Alignm identity: 232
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 123

Conread position: 261-586
Cow position:
Alignm length: 331
Alignm identity: 220
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 189, 70

Conread position: 261-590
Cow position:
Alignm length: 335
Alignm identity: 225
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 242, 81

Conread position: 261-590
Cow position:
Alignm length: 340
Alignm identity: 227
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 123, 72

Conread position: 261-594
Cow position:
Alignm length: 338
Alignm identity: 229
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 244, 81

Conread position: 261-595
Cow position:
Alignm length: 336
Alignm identity: 227
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 35

Conread position: 261-596
Cow position:
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 77

Conread position: 261-600
Cow position:
Alignm length: 344
Alignm identity: 246
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 250, 73

Conread position: 261-601
Cow position:
Alignm length: 369
Alignm identity: 252
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 29, 217

Conread position: 262-527
Cow position:
Alignm length: 273
Alignm identity: 183
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 194, 80

Conread position: 262-569
Cow position:
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 86

Conread position: 262-576
Cow position:
Alignm length: 330
Alignm identity: 224
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 192, 68

Conread position: 262-577
Cow position:
Alignm length: 318
Alignm identity: 211
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 214, 62

Conread position: 262-589
Cow position:
Alignm length: 332
Alignm identity: 222
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 150, 80

Conread position: 262-594
Cow position:
Alignm length: 339
Alignm identity: 238
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 133, 69

Conread position: 263-578
Cow position:
Alignm length: 322
Alignm identity: 214
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 160, 112

Conread position: 264-586
Cow position:
Alignm length: 324
Alignm identity: 217
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 264, 65

Conread position: 270-571
Cow position:
Alignm length: 308
Alignm identity: 212
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 180, 72

Conread position: 271-513
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 213, 58

Conread position: 274-509
Cow position:
Alignm length: 238
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 176, 45

Conread position: 274-538
Cow position:
Alignm length: 279
Alignm identity: 191
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 61, 109

Conread position: 274-555
Cow position:
Alignm length: 287
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 22

Conread position: 274-577
Cow position:
Alignm length: 308
Alignm identity: 220
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 221, 48

Conread position: 274-577
Cow position:
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 48

Conread position: 274-586
Cow position:
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 48

Conread position: 274-586
Cow position:
Alignm length: 320
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 185, 63

Conread position: 275-589
Cow position:
Alignm length: 327
Alignm identity: 219
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 56, 108

Conread position: 276-591
Cow position:
Alignm length: 323
Alignm identity: 222
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 174, 69

Conread position: 277-586
Cow position:
Alignm length: 310
Alignm identity: 204
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 277-587
Cow position:
Alignm length: 311
Alignm identity: 211
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 277-590
Cow position:
Alignm length: 323
Alignm identity: 229
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 182, 17

Conread position: 279-578
Cow position:
Alignm length: 303
Alignm identity: 209
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 239, 40

Conread position: 283-583
Cow position:
Alignm length: 309
Alignm identity: 218
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 9, 45

Conread position: 306-494
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 144, 25

Conread position: 308-443
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 67

Conread position: 312-588
Cow position:
Alignm length: 287
Alignm identity: 193
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 124, 17

Conread position: 318-583
Cow position:
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 59

Conread position: 323-490
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 53

Conread position: 330-586
Cow position:
Alignm length: 261
Alignm identity: 185
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 14, 47

Conread position: 331-566
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 60

Conread position: 331-577
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 59

Conread position: 331-586
Cow position:
Alignm length: 264
Alignm identity: 183
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 30, 75

Conread position: 331-590
Cow position:
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 331-600
Cow position:
Alignm length: 280
Alignm identity: 200
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 123, 265

Conread position: 331-600
Cow position:
Alignm length: 280
Alignm identity: 204
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 108, 45

Conread position: 331-600
Cow position:
Alignm length: 275
Alignm identity: 198
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 119, 23

Conread position: 332-591
Cow position:
Alignm length: 267
Alignm identity: 187
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 46

Conread position: 332-594
Cow position:
Alignm length: 276
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 335-600
Cow position:
Alignm length: 267
Alignm identity: 188
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 18

Conread position: 338-555
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 5, 38

Conread position: 338-594
Cow position:
Alignm length: 261
Alignm identity: 186
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 173, 38

Conread position: 341-527
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 140, 11

Conread position: 342-594
Cow position:
Alignm length: 256
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 176, 235

Conread position: 345-576
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 121, 31

Conread position: 345-585
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 117, 101

Conread position: 345-586
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 122, 31

Conread position: 345-587
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 150, 31

Conread position: 345-591
Cow position:
Alignm length: 250
Alignm identity: 187
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 160, 86

Conread position: 345-600
Cow position:
Alignm length: 264
Alignm identity: 198
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 109, 9

Conread position: 346-555
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 152, 31

Conread position: 346-570
Cow position:
Alignm length: 235
Alignm identity: 158
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 107, 50

Conread position: 346-576
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 107, 30

Conread position: 346-586
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 141, 29

Conread position: 346-590
Cow position:
Alignm length: 254
Alignm identity: 172
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 107, 175

Conread position: 346-591
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 221, 29

Conread position: 346-599
Cow position:
Alignm length: 267
Alignm identity: 188
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 45, 29

Conread position: 348-578
Cow position:
Alignm length: 236
Alignm identity: 174
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 59, 28

Conread position: 349-580
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 105, 27

Conread position: 353-577
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 165, 88

Conread position: 353-584
Cow position:
Alignm length: 237
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 353-588
Cow position:
Alignm length: 237
Alignm identity: 178
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 165, 23

Conread position: 353-600
Cow position:
Alignm length: 252
Alignm identity: 185
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 88, 19

Conread position: 354-577
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 224

Conread position: 355-594
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 21

Conread position: 355-600
Cow position:
Alignm length: 252
Alignm identity: 189
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 155, 21

Conread position: 356-583
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 144, 29

Conread position: 356-598
Cow position:
Alignm length: 247
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 20

Conread position: 356-600
Cow position:
Alignm length: 251
Alignm identity: 189
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 89, 14

Conread position: 358-585
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 152, 18

Conread position: 365-573
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 145, 0

Conread position: 372-588
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 375-600
Cow position:
Alignm length: 234
Alignm identity: 175
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 46, 86

Conread position: 376-586
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 125, 0

Conread position: 378-584
Cow position:
Alignm length: 211
Alignm identity: 144
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 123, 74

Conread position: 378-594
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 76, 59

Conread position: 380-594
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 67, 208

Conread position: 396-588
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 103, 187

Conread position: 398-584
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 403-599
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 141, 0

Conread position: 404-571
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 5

Conread position: 421-591
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 441-600
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 141

Conread position: 447-600
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 141

Conread position: 450-600
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 143, 127

Show alignments to all cow chromosomes.