Cow genome map

Conread name: Ova1-OVRM10218A03

Conread position: 206-578
Cow position: chr12:8869327-8868946 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 45

Conread position: 217-464
Cow position: chr12:18553834-18554083 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 167
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 120

Conread position: 232-564
Cow position: chr12:29484299-29483974 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 226
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 93

Conread position: 233-477
Cow position: chr12:28737991-28738244 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 148

Conread position: 233-601
Cow position: chr12:27039167-27038802 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 265
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 20

Conread position: 251-594
Cow position: chr12:33457738-33458093 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 73, 14

Conread position: 256-600
Cow position: chr12:12939331-12938970 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 128

Conread position: 257-576
Cow position: chr12:20326395-20326703 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 224
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 197, 37

Conread position: 258-512
Cow position: chr12:21393319-21393567 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 134, 83

Conread position: 261-470
Cow position: chr12:39356941-39357142 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 189, 58

Conread position: 261-508
Cow position: chr12:5829757-5830016 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 92, 115

Conread position: 261-522
Cow position: chr12:33875946-33875675 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 55, 122

Conread position: 261-524
Cow position: chr12:10188877-10188631 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 155, 64

Conread position: 261-566
Cow position: chr12:31532789-31532491 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 257, 114

Conread position: 261-577
Cow position: chr12:794166-794489 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 58

Conread position: 261-586
Cow position: chr12:2242265-2241950 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 235, 79

Conread position: 261-586
Cow position: chr12:19039993-19039671 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 217
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 173, 82

Conread position: 261-591
Cow position: chr12:25560995-25561311 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 192, 83

Conread position: 261-594
Cow position: chr12:31429932-31429624 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 257, 77

Conread position: 261-596
Cow position: chr12:25364957-25364641 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 216
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 261-601
Cow position: chr12:31218065-31218411 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 220

Conread position: 262-583
Cow position: chr12:16543951-16543640 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 215
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 188, 17

Conread position: 263-581
Cow position: chr12:3211947-3212262 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 45

Conread position: 267-512
Cow position: chr12:7108815-7109053 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 232, 55

Conread position: 267-572
Cow position: chr12:26869166-26868869 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 187, 71

Conread position: 278-601
Cow position: chr12:1223702-1223389 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 10, 69

Conread position: 291-576
Cow position: chr12:3757401-3757108 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 47, 155

Conread position: 292-505
Cow position: chr12:27573376-27573157 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 39

Conread position: 310-586
Cow position: chr12:6411071-6410796 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 12, 69

Conread position: 316-577
Cow position: chr12:37994059-37993793 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 30, 69

Conread position: 325-586
Cow position: chr12:8943545-8943284 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 51

Conread position: 326-587
Cow position: chr12:30805533-30805794 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 7

Conread position: 331-522
Cow position: chr12:4518515-4518320 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 119, 58

Conread position: 331-546
Cow position: chr12:40307378-40307597 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 122, 44

Conread position: 331-573
Cow position: chr12:246008-245765 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 172, 46

Conread position: 337-599
Cow position: chr12:18769388-18769121 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 339-590
Cow position: chr12:3055826-3056072 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 111, 161

Conread position: 341-566
Cow position: chr12:44622051-44622273 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 179, 34

Conread position: 341-590
Cow position: chr12:16851314-16851066 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 169, 11

Conread position: 341-594
Cow position: chr12:47800121-47799878 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 181, 22

Conread position: 345-511
Cow position: chr12:35771337-35771167 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 345-536
Cow position: chr12:9465764-9465565 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 46

Conread position: 345-577
Cow position: chr12:20312470-20312245 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 125, 31

Conread position: 345-591
Cow position: chr12:3039210-3039448 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 127, 40

Conread position: 346-566
Cow position: chr12:18421229-18421006 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 107, 30

Conread position: 346-576
Cow position: chr12:29995765-29995532 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 29

Conread position: 346-584
Cow position: chr12:4342024-4341803 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 0

Conread position: 346-591
Cow position: chr12:6489279-6489047 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 346-596
Cow position: chr12:35807373-35807629 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 83, 39

Conread position: 346-600
Cow position: chr12:25619680-25619421 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 94, 30

Conread position: 347-512
Cow position: chr12:18572336-18572504 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 347-589
Cow position: chr12:3076925-3076675 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 103, 30

Conread position: 353-573
Cow position: chr12:40270382-40270166 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 142, 23

Conread position: 353-590
Cow position: chr12:5905761-5905995 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 160, 23

Conread position: 353-594
Cow position: chr12:5714333-5714574 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 165, 23

Conread position: 367-600
Cow position: chr12:18417281-18417522 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 87, 42

Conread position: 377-573
Cow position: chr12:32399922-32400125 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 73, 50

Conread position: 379-577
Cow position: chr12:28559024-28559226 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 62, 0

Conread position: 389-595
Cow position: chr12:38484660-38484444 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 56

Conread position: 396-599
Cow position: chr12:1487783-1487995 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 59, 82

Conread position: 418-560
Cow position: chr12:13657933-13657788 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 36, 130

Conread position: 420-600
Cow position: chr12:6117670-6117855 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 423-594
Cow position: chr12:16631713-16631878 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 49

Conread position: 441-591
Cow position: chr12:11696466-11696624 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.