Cow genome map

Conread name: Ova1-OVRM10218A03

Conread position: 206-573
Cow position: chr18:42747157-42747524 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 252
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 57, 45

Conread position: 208-600
Cow position: chr18:51500508-51500118 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 276
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 69

Conread position: 217-598
Cow position: chr18:21938934-21939313 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 278
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 28, 112

Conread position: 219-526
Cow position: chr18:41270679-41270981 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 165, 35

Conread position: 220-582
Cow position: chr18:56362020-56361660 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 243
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 99

Conread position: 226-591
Cow position: chr18:12241864-12242223 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 245
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 158

Conread position: 227-594
Cow position: chr18:45104847-45104492 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 245
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 57, 31

Conread position: 233-514
Cow position: chr18:46881081-46880809 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 220, 109

Conread position: 249-586
Cow position: chr18:20174512-20174184 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 228
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 245, 84

Conread position: 255-542
Cow position: chr18:52632797-52632499 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 8, 249

Conread position: 256-600
Cow position: chr18:40203169-40202849 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 29, 0

Conread position: 257-503
Cow position: chr18:36769317-36769077 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 99, 126

Conread position: 257-586
Cow position: chr18:43463793-43463462 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 65, 70

Conread position: 257-586
Cow position: chr18:52635455-52635134 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 225
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 238, 85

Conread position: 257-590
Cow position: chr18:4515633-4515976 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 126

Conread position: 261-465
Cow position: chr18:21751933-21752124 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 261-526
Cow position: chr18:7486882-7487143 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 141, 81

Conread position: 261-526
Cow position: chr18:31082708-31082445 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 63

Conread position: 261-549
Cow position: chr18:49665527-49665249 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 253, 102

Conread position: 261-563
Cow position: chr18:36907544-36907237 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 150, 72

Conread position: 261-563
Cow position: chr18:36912070-36911763 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 150, 72

Conread position: 261-567
Cow position: chr18:45961629-45961343 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 270, 81

Conread position: 261-571
Cow position: chr18:51538051-51537732 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 230
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 82, 32

Conread position: 261-572
Cow position: chr18:44262248-44262557 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 85

Conread position: 261-576
Cow position: chr18:39662407-39662714 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 132, 83

Conread position: 261-577
Cow position: chr18:54574683-54574387 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 261-582
Cow position: chr18:30248498-30248193 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 213
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 306, 70

Conread position: 261-584
Cow position: chr18:22275412-22275091 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 211
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 144, 74

Conread position: 261-585
Cow position: chr18:25003247-25002936 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 81

Conread position: 261-587
Cow position: chr18:16134677-16134370 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 155, 31

Conread position: 261-588
Cow position: chr18:5486881-5487195 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 233
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 257, 81

Conread position: 261-588
Cow position: chr18:33606260-33606577 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 233, 58

Conread position: 261-589
Cow position: chr18:19273486-19273155 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 72, 112

Conread position: 261-593
Cow position: chr18:50993643-50993320 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 189, 68

Conread position: 261-594
Cow position: chr18:14048342-14048658 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 165, 72

Conread position: 262-566
Cow position: chr18:47314667-47314364 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 177, 76

Conread position: 262-581
Cow position: chr18:13172894-13172581 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 185, 75

Conread position: 262-592
Cow position: chr18:51211797-51212135 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 73, 118

Conread position: 262-593
Cow position: chr18:2609102-2608777 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 203, 69

Conread position: 267-526
Cow position: chr18:45395629-45395891 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 172, 77

Conread position: 272-592
Cow position: chr18:35797262-35797574 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 60

Conread position: 274-503
Cow position: chr18:23669937-23669701 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 211

Conread position: 274-582
Cow position: chr18:29796790-29796484 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 24, 53

Conread position: 274-591
Cow position: chr18:21682325-21682030 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 174, 57

Conread position: 276-600
Cow position: chr18:1144568-1144228 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 230
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 108

Conread position: 305-512
Cow position: chr18:49655371-49655574 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 35, 76

Conread position: 307-581
Cow position: chr18:18919289-18919017 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 188, 69

Conread position: 322-599
Cow position: chr18:16726328-16726605 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 144, 32

Conread position: 324-578
Cow position: chr18:13359742-13360001 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 8, 23

Conread position: 325-600
Cow position: chr18:50566554-50566831 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 32

Conread position: 331-502
Cow position: chr18:21067628-21067797 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 331-600
Cow position: chr18:10101180-10101448 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 41

Conread position: 332-567
Cow position: chr18:329583-329352 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 334-552
Cow position: chr18:50700356-50700582 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 120, 0

Conread position: 334-600
Cow position: chr18:25970941-25970676 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 119, 42

Conread position: 335-600
Cow position: chr18:21175872-21176145 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 49, 259

Conread position: 340-591
Cow position: chr18:11166676-11166930 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 155, 36

Conread position: 342-601
Cow position: chr18:23424627-23424877 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 343-591
Cow position: chr18:21195639-21195395 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 178, 0

Conread position: 343-592
Cow position: chr18:8105243-8104991 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 41, 61

Conread position: 345-526
Cow position: chr18:32280993-32281171 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 30, 119

Conread position: 345-599
Cow position: chr18:26535814-26535553 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 107, 31

Conread position: 346-512
Cow position: chr18:81459-81625 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 116, 29

Conread position: 346-583
Cow position: chr18:4540169-4539936 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 172, 30

Conread position: 346-586
Cow position: chr18:52637826-52637575 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 346-591
Cow position: chr18:44549204-44548966 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 168, 30

Conread position: 347-562
Cow position: chr18:55462005-55461787 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 76

Conread position: 347-571
Cow position: chr18:20864687-20864920 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 107, 42

Conread position: 348-577
Cow position: chr18:6610153-6609922 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 114, 78

Conread position: 351-594
Cow position: chr18:35636642-35636393 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 154, 34

Conread position: 351-599
Cow position: chr18:6157624-6157872 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 146

Conread position: 353-538
Cow position: chr18:46453169-46452978 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 353-593
Cow position: chr18:33157531-33157765 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 167, 21

Conread position: 353-600
Cow position: chr18:51298191-51298438 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 148, 23

Conread position: 353-601
Cow position: chr18:19387290-19387537 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 35, 22

Conread position: 356-594
Cow position: chr18:35537516-35537281 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 140, 20

Conread position: 357-600
Cow position: chr18:51412088-51412326 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 59, 19

Conread position: 358-601
Cow position: chr18:42060791-42061033 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 27, 189

Conread position: 361-583
Cow position: chr18:17334698-17334470 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 149, 15

Conread position: 361-586
Cow position: chr18:21203541-21203324 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 370-576
Cow position: chr18:5570878-5571093 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 371-590
Cow position: chr18:17650008-17649794 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 129, 25

Conread position: 371-594
Cow position: chr18:36477922-36478152 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 83, 121

Conread position: 385-596
Cow position: chr18:22411876-22411658 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 216

Conread position: 389-590
Cow position: chr18:19363677-19363884 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 110, 20

Conread position: 398-579
Cow position: chr18:34021144-34021323 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 159, 0

Conread position: 405-591
Cow position: chr18:55397066-55397256 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 65, 24

Conread position: 408-599
Cow position: chr18:51587781-51587587 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 74, 93

Conread position: 423-594
Cow position: chr18:23715110-23714934 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 47

Conread position: 427-584
Cow position: chr18:14085244-14085400 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 92

Conread position: 441-590
Cow position: chr18:18369566-18369415 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 78, 137

Conread position: 450-594
Cow position: chr18:35749171-35749029 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 0

Show alignments to all cow chromosomes.