Cow genome map

Conread name: Ova1-OVRM10218A03

Conread position: 178-601
Cow position: chr19:2260568-2260149 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 294
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 80, 44

Conread position: 203-573
Cow position: chr19:48409105-48409464 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 254
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 48

Conread position: 208-600
Cow position: chr19:48478558-48478959 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 39

Conread position: 218-581
Cow position: chr19:8839199-8839565 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 111

Conread position: 234-593
Cow position: chr19:43733357-43733716 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 255
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 15, 216

Conread position: 254-586
Cow position: chr19:30435853-30436199 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 238
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 79

Conread position: 256-593
Cow position: chr19:47109678-47110012 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 29

Conread position: 257-499
Cow position: chr19:22746234-22746481 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 73, 120

Conread position: 257-576
Cow position: chr19:46918489-46918806 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 189, 17

Conread position: 257-577
Cow position: chr19:20699733-20700045 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 193, 68

Conread position: 257-578
Cow position: chr19:31378968-31378643 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 200, 86

Conread position: 257-584
Cow position: chr19:31873754-31874077 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 86

Conread position: 257-589
Cow position: chr19:4599725-4600038 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 232
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 8, 66

Conread position: 257-590
Cow position: chr19:31826749-31827067 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 243, 84

Conread position: 261-464
Cow position: chr19:33882607-33882808 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 66

Conread position: 261-468
Cow position: chr19:33674698-33674502 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 127, 33

Conread position: 261-485
Cow position: chr19:46873041-46872820 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 56

Conread position: 261-507
Cow position: chr19:36602020-36602260 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 186, 79

Conread position: 261-510
Cow position: chr19:14573021-14573264 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 178, 83

Conread position: 261-516
Cow position: chr19:12613876-12613633 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 235, 68

Conread position: 261-519
Cow position: chr19:52305268-52305007 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 119

Conread position: 261-526
Cow position: chr19:46693801-46694057 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 29, 35

Conread position: 261-573
Cow position: chr19:5649022-5648702 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 16, 125

Conread position: 261-577
Cow position: chr19:33932492-33932191 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 257, 70

Conread position: 261-578
Cow position: chr19:23785840-23786151 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 189, 44

Conread position: 261-578
Cow position: chr19:42205582-42205891 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 177, 53

Conread position: 261-584
Cow position: chr19:21285447-21285109 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 29, 34

Conread position: 261-584
Cow position: chr19:35539956-35540263 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 181, 64

Conread position: 261-590
Cow position: chr19:5185602-5185274 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 215
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 195, 103

Conread position: 261-590
Cow position: chr19:37647189-37646868 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 189, 34

Conread position: 261-591
Cow position: chr19:16566810-16567126 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 316, 83

Conread position: 261-592
Cow position: chr19:36176391-36176722 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 189, 83

Conread position: 261-595
Cow position: chr19:39986905-39986569 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 223
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 75, 173

Conread position: 261-599
Cow position: chr19:36977264-36976934 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 37

Conread position: 261-600
Cow position: chr19:19673070-19673394 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 63

Conread position: 262-573
Cow position: chr19:4195381-4195681 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 208
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 194, 80

Conread position: 262-589
Cow position: chr19:32178057-32177733 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 177, 80

Conread position: 262-590
Cow position: chr19:11171566-11171249 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 232
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 234, 57

Conread position: 263-498
Cow position: chr19:12375391-12375160 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 144, 82

Conread position: 263-590
Cow position: chr19:14929019-14928687 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 174, 68

Conread position: 267-588
Cow position: chr19:8033396-8033716 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 221
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 113, 77

Conread position: 267-601
Cow position: chr19:19246437-19246753 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 176, 109

Conread position: 274-432
Cow position: chr19:30551711-30551871 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 32

Conread position: 274-583
Cow position: chr19:23403986-23403683 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 85, 57

Conread position: 274-590
Cow position: chr19:4502870-4503188 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 81, 25

Conread position: 279-591
Cow position: chr19:39245569-39245867 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 212
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 215, 52

Conread position: 283-600
Cow position: chr19:36461855-36461551 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 61

Conread position: 284-600
Cow position: chr19:28921506-28921804 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 227, 8

Conread position: 300-590
Cow position: chr19:27612497-27612203 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 44, 83

Conread position: 331-573
Cow position: chr19:7668407-7668652 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 98

Conread position: 331-582
Cow position: chr19:20935464-20935715 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 46

Conread position: 331-589
Cow position: chr19:33882454-33882202 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 197

Conread position: 332-498
Cow position: chr19:21042826-21042995 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 44

Conread position: 332-599
Cow position: chr19:33306015-33306287 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 130, 14

Conread position: 334-588
Cow position: chr19:2734164-2734419 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 6

Conread position: 335-600
Cow position: chr19:36379963-36380228 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 181, 15

Conread position: 336-508
Cow position: chr19:31287830-31287664 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 336-600
Cow position: chr19:31846828-31846573 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 114, 39

Conread position: 339-590
Cow position: chr19:9387353-9387604 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 108, 14

Conread position: 345-584
Cow position: chr19:15068270-15068040 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 173, 30

Conread position: 345-594
Cow position: chr19:2771284-2771039 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 173, 39

Conread position: 345-600
Cow position: chr19:18242698-18242446 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 160, 31

Conread position: 345-601
Cow position: chr19:9704107-9703857 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 157, 41

Conread position: 346-512
Cow position: chr19:17664365-17664533 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 104, 29

Conread position: 346-586
Cow position: chr19:2138381-2138138 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 154, 30

Conread position: 346-588
Cow position: chr19:25999356-25999594 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 168, 29

Conread position: 346-590
Cow position: chr19:28014204-28014447 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 31

Conread position: 346-591
Cow position: chr19:4252248-4252002 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 108, 39

Conread position: 346-596
Cow position: chr19:19661766-19662021 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 106, 30

Conread position: 347-581
Cow position: chr19:28451130-28451367 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 109, 30

Conread position: 347-591
Cow position: chr19:35741882-35742130 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 103, 151

Conread position: 349-555
Cow position: chr19:25053947-25053737 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 26

Conread position: 353-572
Cow position: chr19:41584705-41584926 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 165, 218

Conread position: 353-600
Cow position: chr19:19924865-19924620 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 101, 23

Conread position: 355-594
Cow position: chr19:10093028-10093268 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 142, 97

Conread position: 356-583
Cow position: chr19:35782398-35782168 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 98, 33

Conread position: 356-594
Cow position: chr19:7637503-7637264 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 131

Conread position: 356-600
Cow position: chr19:2342210-2342461 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 95, 234

Conread position: 357-580
Cow position: chr19:43516971-43517193 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 169, 19

Conread position: 368-594
Cow position: chr19:33685845-33686062 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 372-594
Cow position: chr19:30052251-30052034 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 144, 82

Conread position: 375-583
Cow position: chr19:22863910-22863697 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 145

Conread position: 375-588
Cow position: chr19:2589263-2589477 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 129, 51

Conread position: 376-600
Cow position: chr19:44489845-44490075 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 78, 42

Conread position: 377-594
Cow position: chr19:904736-904952 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 126

Conread position: 379-599
Cow position: chr19:27346885-27346669 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 67

Conread position: 383-590
Cow position: chr19:44366787-44366990 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 389-590
Cow position: chr19:31381231-31381024 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 65, 163

Conread position: 396-600
Cow position: chr19:35344709-35344904 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 115

Conread position: 408-585
Cow position: chr19:24137043-24137224 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 168

Conread position: 421-600
Cow position: chr19:15936635-15936815 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 21, 100

Conread position: 450-596
Cow position: chr19:25271589-25271441 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 132

Show alignments to all cow chromosomes.