Cow genome map

Conread name: Ova1-OVRM10218A03

Conread position: 181-567
Cow position: chr24:27874150-27874536 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 268
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 39, 148

Conread position: 203-573
Cow position: chr24:24250305-24250668 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 241
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 317, 48

Conread position: 209-598
Cow position: chr24:37205293-37204913 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 12

Conread position: 210-600
Cow position: chr24:5849828-5849428 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 280
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 117

Conread position: 218-583
Cow position: chr24:28029125-28028757 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 246
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 53, 161

Conread position: 226-588
Cow position: chr24:29679707-29679355 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 224, 39

Conread position: 227-572
Cow position: chr24:19658146-19658497 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 243
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 24

Conread position: 232-475
Cow position: chr24:16055931-16055688 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 106

Conread position: 234-577
Cow position: chr24:18405693-18405376 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 24, 19

Conread position: 249-594
Cow position: chr24:6508169-6507808 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 147

Conread position: 256-586
Cow position: chr24:27683804-27683491 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 198, 42

Conread position: 257-526
Cow position: chr24:28303716-28303460 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 256, 62

Conread position: 257-583
Cow position: chr24:7917735-7917412 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 197, 80

Conread position: 257-586
Cow position: chr24:38266821-38267145 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 70

Conread position: 259-583
Cow position: chr24:15057027-15057353 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 213, 108

Conread position: 261-508
Cow position: chr24:8810744-8810986 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 192, 70

Conread position: 261-508
Cow position: chr24:14913899-14913667 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 261-526
Cow position: chr24:24002616-24002872 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 189, 81

Conread position: 261-536
Cow position: chr24:33621848-33621585 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 198, 70

Conread position: 261-573
Cow position: chr24:20862323-20862017 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 238, 70

Conread position: 261-580
Cow position: chr24:28724073-28724381 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 34

Conread position: 261-584
Cow position: chr24:25677671-25677989 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 31

Conread position: 261-586
Cow position: chr24:30860266-30860590 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 84

Conread position: 261-587
Cow position: chr24:30545241-30544905 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 56, 127

Conread position: 261-588
Cow position: chr24:27906066-27906394 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 123, 83

Conread position: 261-594
Cow position: chr24:27633027-27633368 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 136

Conread position: 261-594
Cow position: chr24:33238911-33238583 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 234, 68

Conread position: 261-596
Cow position: chr24:43733609-43733934 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 25

Conread position: 261-598
Cow position: chr24:35568827-35569149 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 191, 81

Conread position: 261-600
Cow position: chr24:28721518-28721853 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 196, 70

Conread position: 261-600
Cow position: chr24:32158629-32158308 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 83, 0

Conread position: 261-600
Cow position: chr24:32759147-32758792 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 71, 117

Conread position: 261-600
Cow position: chr24:42581193-42580877 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 73

Conread position: 262-547
Cow position: chr24:16267417-16267692 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 115

Conread position: 262-585
Cow position: chr24:39440918-39440602 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 236, 53

Conread position: 262-585
Cow position: chr24:40129751-40130080 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 90, 69

Conread position: 262-586
Cow position: chr24:33944032-33944355 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 71

Conread position: 263-583
Cow position: chr24:37386718-37386403 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 82, 118

Conread position: 263-591
Cow position: chr24:16557012-16556678 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 67, 15

Conread position: 267-582
Cow position: chr24:27809823-27810136 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 208
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 185, 57

Conread position: 274-522
Cow position: chr24:36730125-36730385 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 135

Conread position: 274-524
Cow position: chr24:6665839-6665592 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 176, 48

Conread position: 274-577
Cow position: chr24:39123514-39123807 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 165, 70

Conread position: 274-586
Cow position: chr24:42103021-42103327 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 235, 56

Conread position: 274-591
Cow position: chr24:19466282-19465962 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 227
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 180, 65

Conread position: 274-594
Cow position: chr24:39350576-39350257 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 48, 159

Conread position: 277-578
Cow position: chr24:38347333-38347628 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 176, 67

Conread position: 279-591
Cow position: chr24:5141590-5141899 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 171, 60

Conread position: 283-525
Cow position: chr24:25245697-25245939 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 72

Conread position: 300-526
Cow position: chr24:32668947-32669175 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 150, 31

Conread position: 300-587
Cow position: chr24:43432459-43432746 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 40, 84

Conread position: 331-557
Cow position: chr24:2730874-2730649 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 172, 44

Conread position: 331-567
Cow position: chr24:18331432-18331656 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 44

Conread position: 331-582
Cow position: chr24:34369310-34369057 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 119, 44

Conread position: 331-583
Cow position: chr24:18974897-18975152 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 45

Conread position: 335-576
Cow position: chr24:11118980-11119228 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 107

Conread position: 336-582
Cow position: chr24:7079492-7079740 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 116, 35

Conread position: 338-590
Cow position: chr24:22433333-22433591 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 74

Conread position: 343-586
Cow position: chr24:27052784-27052541 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 161, 29

Conread position: 345-525
Cow position: chr24:15666699-15666515 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 105, 32

Conread position: 345-581
Cow position: chr24:591620-591861 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 75, 40

Conread position: 345-586
Cow position: chr24:7001359-7001113 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 345-591
Cow position: chr24:17412447-17412698 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 109, 30

Conread position: 346-576
Cow position: chr24:17104856-17104629 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 172, 80

Conread position: 346-577
Cow position: chr24:44041299-44041067 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 149, 104

Conread position: 346-579
Cow position: chr24:25320700-25320940 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 104, 31

Conread position: 346-591
Cow position: chr24:27720041-27719797 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 172, 30

Conread position: 346-593
Cow position: chr24:27341313-27341063 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 108, 39

Conread position: 349-566
Cow position: chr24:18324328-18324555 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 349-583
Cow position: chr24:35073806-35074043 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 151, 27

Conread position: 350-590
Cow position: chr24:24311216-24311461 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 96, 26

Conread position: 353-571
Cow position: chr24:7913716-7913942 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 97, 32

Conread position: 353-587
Cow position: chr24:23685343-23685116 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 163, 23

Conread position: 353-591
Cow position: chr24:1438549-1438316 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 119

Conread position: 353-596
Cow position: chr24:25885440-25885197 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 113, 23

Conread position: 356-599
Cow position: chr24:39681576-39681819 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 20

Conread position: 357-526
Cow position: chr24:39607832-39607661 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 29

Conread position: 367-576
Cow position: chr24:17955716-17955498 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 19

Conread position: 370-555
Cow position: chr24:28349319-28349502 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 371-569
Cow position: chr24:43448860-43448667 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 99

Conread position: 373-591
Cow position: chr24:33724114-33723888 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 81, 134

Conread position: 378-593
Cow position: chr24:14617396-14617617 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 70

Conread position: 396-600
Cow position: chr24:27054160-27054375 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 418-599
Cow position: chr24:12263922-12263746 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 77

Conread position: 427-594
Cow position: chr24:2143532-2143713 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 440-600
Cow position: chr24:31258531-31258370 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 61, 13

Conread position: 446-600
Cow position: chr24:35827551-35827702 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 90

Conread position: 474-594
Cow position: chr24:26455677-26455801 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.