Cow genome map


           Conread name:
           Ova1-OVRM10218A03
        

               Conread position:
               208-486
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               153, 36
               

               Conread position:
               208-584
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               263
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               55, 43
               

               Conread position:
               215-573
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               30, 123
               

               Conread position:
               216-586
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 35
               

               Conread position:
               216-590
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 54
               

               Conread position:
               254-594
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 131
               

               Conread position:
               256-593
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               243
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               257-586
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               261, 85
               

               Conread position:
               257-596
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               245
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               65, 49
               

               Conread position:
               261-490
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               261-511
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 206
               

               Conread position:
               261-583
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               261, 70
               

               Conread position:
               261-584
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               233, 80
               

               Conread position:
               261-590
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               189, 85
               

               Conread position:
               261-594
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               261-600
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 81
               

               Conread position:
               261-601
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               239
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               262-579
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               194, 60
               

               Conread position:
               262-582
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 119
               

               Conread position:
               262-590
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               216, 110
               

               Conread position:
               263-594
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               191, 68
               

               Conread position:
               274-571
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               244, 70
               

               Conread position:
               274-585
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               240, 57
               

               Conread position:
               274-594
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 50
               

               Conread position:
               277-590
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               111, 22
               

               Conread position:
               331-589
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 46
               

               Conread position:
               334-583
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               16, 8
               

               Conread position:
               337-566
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               11, 190
               

               Conread position:
               340-562
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               113, 9
               

               Conread position:
               341-592
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               112, 13
               

               Conread position:
               342-585
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               28, 36
               

               Conread position:
               345-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               345-594
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               155, 31
               

               Conread position:
               345-594
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               107, 31
               

               Conread position:
               346-566
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               126, 30
               

               Conread position:
               346-576
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               106, 30
               

               Conread position:
               346-576
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               95, 30
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               121, 25
               

               Conread position:
               346-584
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               346-584
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               106, 39
               

               Conread position:
               346-599
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               347-589
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               153, 38
               

               Conread position:
               347-594
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               172, 25
               

               Conread position:
               353-594
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               152, 23
               

               Conread position:
               355-577
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               112, 21
               

               Conread position:
               361-583
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               153, 9
               

               Conread position:
               364-583
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               150, 12
               

               Conread position:
               365-582
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               153, 11
               

               Conread position:
               375-593
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               135, 83
               

               Conread position:
               377-570
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               139, 38
               

               Conread position:
               377-594
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               124, 95
               

               Conread position:
               378-600
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               132, 78
               

               Conread position:
               396-586
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               122, 70
               

               Conread position:
               396-600
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               54, 30
               

               Conread position:
               405-573
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               420-599
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               421-601
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 182
               

               Conread position:
               424-595
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               428-573
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               26, 67
               

               Conread position:
               441-582
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               73, 0
               
Show alignments to all cow chromosomes.