Cow genome map
| Conread name: | Ova1-OVRM10218A03 |
| Conread position: | 203-513 |
| Cow position: | chr3:44254859-44254545 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 60, 43 |
| Conread position: | 205-600 |
| Cow position: | chr3:36174501-36174101 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 281 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 14, 147 |
| Conread position: | 206-591 |
| Cow position: | chr3:53588812-53588428 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 207-571 |
| Cow position: | chr3:80564539-80564902 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 98 |
| Conread position: | 208-596 |
| Cow position: | chr3:48211095-48211451 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 270 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 114, 73 |
| Conread position: | 208-600 |
| Cow position: | chr3:5420282-5419895 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 50, 43 |
| Conread position: | 217-600 |
| Cow position: | chr3:15685321-15684957 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 275 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 46, 131 |
| Conread position: | 218-582 |
| Cow position: | chr3:15058020-15057660 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 45, 163 |
| Conread position: | 224-572 |
| Cow position: | chr3:33633289-33632952 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 120 |
| Conread position: | 246-586 |
| Cow position: | chr3:27544716-27544381 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 247-586 |
| Cow position: | chr3:54434593-54434930 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 248-587 |
| Cow position: | chr3:73417131-73417475 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 10 |
| Conread position: | 249-588 |
| Cow position: | chr3:17222523-17222187 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 182, 28 |
| Conread position: | 255-582 |
| Cow position: | chr3:5101127-5100818 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 32 |
| Conread position: | 256-506 |
| Cow position: | chr3:28928484-28928241 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 204, 86 |
| Conread position: | 256-554 |
| Cow position: | chr3:58865838-58865537 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 120 |
| Conread position: | 256-578 |
| Cow position: | chr3:40345034-40345352 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 188, 86 |
| Conread position: | 256-584 |
| Cow position: | chr3:71231040-71231351 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 240, 86 |
| Conread position: | 256-586 |
| Cow position: | chr3:59630866-59630549 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 262, 88 |
| Conread position: | 257-577 |
| Cow position: | chr3:6853868-6853560 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 239, 62 |
| Conread position: | 257-583 |
| Cow position: | chr3:42584167-42584491 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 235 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 99, 107 |
| Conread position: | 258-524 |
| Cow position: | chr3:78546463-78546206 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 192, 86 |
| Conread position: | 261-504 |
| Cow position: | chr3:79139346-79139115 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 261-508 |
| Cow position: | chr3:20405234-20405471 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 69, 16 |
| Conread position: | 261-508 |
| Cow position: | chr3:22716664-22716407 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 261-526 |
| Cow position: | chr3:16343229-16343506 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 261-527 |
| Cow position: | chr3:73305749-73306001 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 229, 80 |
| Conread position: | 261-536 |
| Cow position: | chr3:66964676-66964396 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 61, 117 |
| Conread position: | 261-563 |
| Cow position: | chr3:45312691-45312980 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 238, 83 |
| Conread position: | 261-568 |
| Cow position: | chr3:58350218-58350524 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 24 |
| Conread position: | 261-570 |
| Cow position: | chr3:60174838-60174544 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 225, 62 |
| Conread position: | 261-573 |
| Cow position: | chr3:22872413-22872106 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 234, 81 |
| Conread position: | 261-576 |
| Cow position: | chr3:2506840-2506532 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 193, 70 |
| Conread position: | 261-576 |
| Cow position: | chr3:5365324-5365621 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 257, 72 |
| Conread position: | 261-576 |
| Cow position: | chr3:41367344-41367042 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 234, 81 |
| Conread position: | 261-577 |
| Cow position: | chr3:57763846-57764171 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 72, 115 |
| Conread position: | 261-577 |
| Cow position: | chr3:63147520-63147210 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 54, 64 |
| Conread position: | 261-578 |
| Cow position: | chr3:21302792-21302494 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 261-581 |
| Cow position: | chr3:38252634-38252928 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 261-584 |
| Cow position: | chr3:62292501-62292170 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 136 |
| Conread position: | 261-586 |
| Cow position: | chr3:80082178-80081869 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 254, 81 |
| Conread position: | 261-587 |
| Cow position: | chr3:51255413-51255745 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 83 |
| Conread position: | 261-588 |
| Cow position: | chr3:65236658-65236979 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 234, 70 |
| Conread position: | 261-590 |
| Cow position: | chr3:20471727-20471409 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 91 |
| Conread position: | 261-590 |
| Cow position: | chr3:61539436-61539759 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 189, 64 |
| Conread position: | 261-591 |
| Cow position: | chr3:31206512-31206831 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 239, 34 |
| Conread position: | 261-592 |
| Cow position: | chr3:10346986-10347314 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 259, 63 |
| Conread position: | 261-594 |
| Cow position: | chr3:26554075-26553753 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 234, 58 |
| Conread position: | 261-594 |
| Cow position: | chr3:65413648-65413320 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 257, 115 |
| Conread position: | 261-600 |
| Cow position: | chr3:33327333-33327673 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 101 |
| Conread position: | 261-600 |
| Cow position: | chr3:51147025-51146701 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 24 |
| Conread position: | 261-600 |
| Cow position: | chr3:55085551-55085207 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 203, 58 |
| Conread position: | 262-549 |
| Cow position: | chr3:31056362-31056082 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 191, 80 |
| Conread position: | 262-582 |
| Cow position: | chr3:35852829-35852525 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 192, 57 |
| Conread position: | 262-590 |
| Cow position: | chr3:48269503-48269818 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 192, 69 |
| Conread position: | 262-591 |
| Cow position: | chr3:19717450-19717135 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 62 |
| Conread position: | 262-594 |
| Cow position: | chr3:3457550-3457881 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 192, 10 |
| Conread position: | 262-594 |
| Cow position: | chr3:12255120-12255439 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 192, 65 |
| Conread position: | 262-601 |
| Cow position: | chr3:26903757-26904077 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 232, 78 |
| Conread position: | 263-553 |
| Cow position: | chr3:18393742-18393467 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 255, 11 |
| Conread position: | 263-576 |
| Cow position: | chr3:15662057-15661756 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 242, 59 |
| Conread position: | 263-593 |
| Cow position: | chr3:49337355-49337684 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 73, 112 |
| Conread position: | 264-600 |
| Cow position: | chr3:39171862-39171516 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 58, 120 |
| Conread position: | 267-577 |
| Cow position: | chr3:17937206-17936897 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 183, 108 |
| Conread position: | 274-517 |
| Cow position: | chr3:83698301-83698057 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 67, 105 |
| Conread position: | 274-520 |
| Cow position: | chr3:470778-470533 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 274-583 |
| Cow position: | chr3:56637311-56637619 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 49 |
| Conread position: | 274-585 |
| Cow position: | chr3:43658064-43657753 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 165, 59 |
| Conread position: | 274-586 |
| Cow position: | chr3:5096835-5097160 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 82, 191 |
| Conread position: | 274-589 |
| Cow position: | chr3:36204202-36204513 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 274-594 |
| Cow position: | chr3:78946204-78945873 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 50, 107 |
| Conread position: | 274-599 |
| Cow position: | chr3:46094481-46094798 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 80, 45 |
| Conread position: | 274-600 |
| Cow position: | chr3:34316326-34315990 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 276-584 |
| Cow position: | chr3:73759887-73759561 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 63, 138 |
| Conread position: | 276-600 |
| Cow position: | chr3:66708418-66708102 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 236 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 240, 38 |
| Conread position: | 278-595 |
| Cow position: | chr3:42603484-42603789 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 159, 39 |
| Conread position: | 279-587 |
| Cow position: | chr3:44623254-44622931 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 280-594 |
| Cow position: | chr3:209980-210277 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 220, 64 |
| Conread position: | 298-567 |
| Cow position: | chr3:28898552-28898287 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 198, 21 |
| Conread position: | 299-600 |
| Cow position: | chr3:77224791-77225083 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 308-498 |
| Cow position: | chr3:65276287-65276093 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 163 |
| Conread position: | 325-585 |
| Cow position: | chr3:64281245-64280979 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 6 |
| Conread position: | 325-594 |
| Cow position: | chr3:4031659-4031932 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 128, 51 |
| Conread position: | 326-571 |
| Cow position: | chr3:81278011-81277759 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 124, 5 |
| Conread position: | 326-585 |
| Cow position: | chr3:74533041-74533301 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 113, 5 |
| Conread position: | 326-596 |
| Cow position: | chr3:41718082-41718357 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 186, 5 |
| Conread position: | 326-601 |
| Cow position: | chr3:45691172-45690903 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 195, 5 |
| Conread position: | 330-601 |
| Cow position: | chr3:58174609-58174874 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 125, 22 |
| Conread position: | 331-524 |
| Cow position: | chr3:52836205-52836011 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 108, 45 |
| Conread position: | 331-571 |
| Cow position: | chr3:22271737-22271496 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 115, 21 |
| Conread position: | 331-586 |
| Cow position: | chr3:23092291-23092022 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 331-594 |
| Cow position: | chr3:48629891-48629631 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 25, 124 |
| Conread position: | 332-555 |
| Cow position: | chr3:27274238-27274452 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 182, 43 |
| Conread position: | 332-586 |
| Cow position: | chr3:74699697-74699442 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 121, 44 |
| Conread position: | 332-600 |
| Cow position: | chr3:78530236-78530501 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 333-555 |
| Cow position: | chr3:18854792-18855018 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 165, 44 |
| Conread position: | 333-586 |
| Cow position: | chr3:42480323-42480571 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 111, 39 |
| Conread position: | 333-587 |
| Cow position: | chr3:82075349-82075106 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 190, 43 |
| Conread position: | 333-594 |
| Cow position: | chr3:14633287-14633025 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 28, 23 |
| Conread position: | 334-594 |
| Cow position: | chr3:54862724-54862454 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 262 |
| Conread position: | 340-526 |
| Cow position: | chr3:59392401-59392210 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 111, 37 |
| Conread position: | 341-594 |
| Cow position: | chr3:45647844-45648093 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 341-594 |
| Cow position: | chr3:53739484-53739227 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 124, 244 |
| Conread position: | 342-572 |
| Cow position: | chr3:73776986-73777224 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 111, 34 |
| Conread position: | 342-591 |
| Cow position: | chr3:73443379-73443130 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 172, 33 |
| Conread position: | 343-552 |
| Cow position: | chr3:54340707-54340492 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 343-577 |
| Cow position: | chr3:65058411-65058646 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 113, 33 |
| Conread position: | 343-582 |
| Cow position: | chr3:71497437-71497191 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 111, 128 |
| Conread position: | 343-585 |
| Cow position: | chr3:82657376-82657132 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 175, 42 |
| Conread position: | 343-589 |
| Cow position: | chr3:22954140-22953900 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 236, 11 |
| Conread position: | 343-599 |
| Cow position: | chr3:22021264-22021008 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 111, 33 |
| Conread position: | 343-601 |
| Cow position: | chr3:58206742-58206485 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 344-594 |
| Cow position: | chr3:30179792-30180043 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 153, 122 |
| Conread position: | 345-512 |
| Cow position: | chr3:76091997-76092163 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 31 |
| Conread position: | 345-578 |
| Cow position: | chr3:59611005-59610776 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 130, 30 |
| Conread position: | 345-596 |
| Cow position: | chr3:31933391-31933135 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 30 |
| Conread position: | 346-527 |
| Cow position: | chr3:7763375-7763557 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 64 |
| Conread position: | 346-562 |
| Cow position: | chr3:61857208-61857433 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 106, 31 |
| Conread position: | 346-571 |
| Cow position: | chr3:53112880-53113112 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 346-571 |
| Cow position: | chr3:79220561-79220792 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 159, 229 |
| Conread position: | 346-579 |
| Cow position: | chr3:79592177-79591936 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 108, 40 |
| Conread position: | 346-581 |
| Cow position: | chr3:69961999-69961766 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 168, 31 |
| Conread position: | 346-583 |
| Cow position: | chr3:33698433-33698680 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 104, 31 |
| Conread position: | 346-584 |
| Cow position: | chr3:14263104-14263347 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 149, 31 |
| Conread position: | 346-586 |
| Cow position: | chr3:20129653-20129898 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 152, 229 |
| Conread position: | 346-586 |
| Cow position: | chr3:53270538-53270783 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 112, 39 |
| Conread position: | 346-589 |
| Cow position: | chr3:16547388-16547632 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 104, 31 |
| Conread position: | 347-588 |
| Cow position: | chr3:4223028-4223266 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 98, 170 |
| Conread position: | 347-588 |
| Cow position: | chr3:26894381-26894619 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 173, 41 |
| Conread position: | 348-577 |
| Cow position: | chr3:66116398-66116166 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 162, 28 |
| Conread position: | 351-594 |
| Cow position: | chr3:75158082-75158320 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 167, 46 |
| Conread position: | 352-596 |
| Cow position: | chr3:77365576-77365333 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 352-600 |
| Cow position: | chr3:22170907-22171155 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 353-576 |
| Cow position: | chr3:11326632-11326411 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 141, 53 |
| Conread position: | 353-584 |
| Cow position: | chr3:17957186-17957416 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 147, 23 |
| Conread position: | 353-585 |
| Cow position: | chr3:56650-56425 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 87, 23 |
| Conread position: | 353-587 |
| Cow position: | chr3:81473723-81473965 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 101, 127 |
| Conread position: | 353-600 |
| Cow position: | chr3:31749785-31750019 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 203, 23 |
| Conread position: | 353-600 |
| Cow position: | chr3:62883921-62884172 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 354-587 |
| Cow position: | chr3:23477955-23478181 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 355-573 |
| Cow position: | chr3:49731916-49731700 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 146, 21 |
| Conread position: | 355-578 |
| Cow position: | chr3:42588070-42588303 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 112, 34 |
| Conread position: | 355-583 |
| Cow position: | chr3:82056396-82056158 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 140, 21 |
| Conread position: | 356-583 |
| Cow position: | chr3:56704132-56703903 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 98, 20 |
| Conread position: | 356-599 |
| Cow position: | chr3:83442923-83442689 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 357-599 |
| Cow position: | chr3:45744436-45744665 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 365-590 |
| Cow position: | chr3:74611293-74611521 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 367-582 |
| Cow position: | chr3:7366144-7365934 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 375-588 |
| Cow position: | chr3:57624203-57624419 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 377-583 |
| Cow position: | chr3:71237899-71238107 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 141, 36 |
| Conread position: | 377-590 |
| Cow position: | chr3:54881498-54881717 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 378-594 |
| Cow position: | chr3:49140308-49140081 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 46, 213 |
| Conread position: | 380-577 |
| Cow position: | chr3:26970570-26970772 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 383-594 |
| Cow position: | chr3:18725886-18725679 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 392-600 |
| Cow position: | chr3:61009680-61009469 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 396-587 |
| Cow position: | chr3:55992110-55991910 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 54, 95 |
| Conread position: | 410-591 |
| Cow position: | chr3:47524734-47524545 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 415-591 |
| Cow position: | chr3:63038915-63039089 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 72 |
| Conread position: | 420-600 |
| Cow position: | chr3:55777817-55778002 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 90 |
| Conread position: | 441-582 |
| Cow position: | chr3:18757967-18757826 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 441-594 |
| Cow position: | chr3:15052144-15051990 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 456-601 |
| Cow position: | chr3:11920210-11920068 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 127, 49 |
Show alignments to all cow chromosomes.