Cow genome map
| Conread name: | Ova1-OVRM10218A03 |
| Conread position: | 203-584 |
| Cow position: | chr5:35144975-35145351 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 260 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 55, 48 |
| Conread position: | 203-596 |
| Cow position: | chr5:1344258-1343841 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 207-600 |
| Cow position: | chr5:27615131-27615532 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 99 |
| Conread position: | 210-563 |
| Cow position: | chr5:34915770-34916119 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 216-415 |
| Cow position: | chr5:3639891-3639685 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 164 |
| Conread position: | 216-452 |
| Cow position: | chr5:23006473-23006240 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 49, 102 |
| Conread position: | 218-601 |
| Cow position: | chr5:29504743-29505127 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 114 |
| Conread position: | 223-594 |
| Cow position: | chr5:28927954-28927578 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 129 |
| Conread position: | 224-476 |
| Cow position: | chr5:24221638-24221876 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 24 |
| Conread position: | 230-499 |
| Cow position: | chr5:67212033-67212295 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 25, 94 |
| Conread position: | 231-567 |
| Cow position: | chr5:27690408-27690075 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 231-576 |
| Cow position: | chr5:6986809-6987156 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 255 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 14, 100 |
| Conread position: | 232-512 |
| Cow position: | chr5:41981054-41981323 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 26, 116 |
| Conread position: | 234-594 |
| Cow position: | chr5:42795205-42794870 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 80 |
| Conread position: | 242-588 |
| Cow position: | chr5:58855768-58856108 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 21, 85 |
| Conread position: | 250-585 |
| Cow position: | chr5:17087353-17087020 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 200, 92 |
| Conread position: | 253-586 |
| Cow position: | chr5:4797633-4797316 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 186, 91 |
| Conread position: | 255-584 |
| Cow position: | chr5:1398407-1398078 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 199, 52 |
| Conread position: | 256-530 |
| Cow position: | chr5:14630225-14629961 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 168, 66 |
| Conread position: | 256-591 |
| Cow position: | chr5:9430791-9430453 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 63 |
| Conread position: | 256-592 |
| Cow position: | chr5:62827072-62826742 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 262, 75 |
| Conread position: | 256-600 |
| Cow position: | chr5:34115331-34115667 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 75, 121 |
| Conread position: | 256-600 |
| Cow position: | chr5:45940930-45940595 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 73 |
| Conread position: | 257-589 |
| Cow position: | chr5:52645396-52645074 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 122, 87 |
| Conread position: | 260-570 |
| Cow position: | chr5:14538962-14538671 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 250, 82 |
| Conread position: | 261-507 |
| Cow position: | chr5:18127328-18127569 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 192, 54 |
| Conread position: | 261-508 |
| Cow position: | chr5:54714054-54713817 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 261-518 |
| Cow position: | chr5:55411970-55412216 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 90, 162 |
| Conread position: | 261-521 |
| Cow position: | chr5:15478796-15479048 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 261-521 |
| Cow position: | chr5:68480898-68481158 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 109 |
| Conread position: | 261-566 |
| Cow position: | chr5:47601499-47601802 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 176, 83 |
| Conread position: | 261-570 |
| Cow position: | chr5:65593565-65593861 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 261-576 |
| Cow position: | chr5:37377556-37377856 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 258, 63 |
| Conread position: | 261-577 |
| Cow position: | chr5:65933241-65932934 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 79 |
| Conread position: | 261-580 |
| Cow position: | chr5:19905607-19905270 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 76, 133 |
| Conread position: | 261-584 |
| Cow position: | chr5:16184780-16185088 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 257, 61 |
| Conread position: | 261-587 |
| Cow position: | chr5:34232417-34232745 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 255 |
| Conread position: | 261-590 |
| Cow position: | chr5:34183906-34184238 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 123, 32 |
| Conread position: | 261-590 |
| Cow position: | chr5:62172094-62172425 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 70, 93 |
| Conread position: | 261-591 |
| Cow position: | chr5:41604298-41604632 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 176, 68 |
| Conread position: | 261-593 |
| Cow position: | chr5:3281519-3281842 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 189, 61 |
| Conread position: | 261-593 |
| Cow position: | chr5:53835382-53835725 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 61, 112 |
| Conread position: | 261-594 |
| Cow position: | chr5:2500505-2500171 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 63 |
| Conread position: | 261-594 |
| Cow position: | chr5:4032319-4031981 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 91, 121 |
| Conread position: | 261-594 |
| Cow position: | chr5:39447847-39447527 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 205, 73 |
| Conread position: | 261-594 |
| Cow position: | chr5:48574086-48573761 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 71, 116 |
| Conread position: | 261-594 |
| Cow position: | chr5:51999881-52000231 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 250 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 261-600 |
| Cow position: | chr5:17027786-17028109 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 81 |
| Conread position: | 261-600 |
| Cow position: | chr5:20974758-20974431 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 83 |
| Conread position: | 261-600 |
| Cow position: | chr5:41229399-41229722 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 261-600 |
| Cow position: | chr5:49558850-49559181 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 220, 71 |
| Conread position: | 262-498 |
| Cow position: | chr5:37432112-37431867 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 65 |
| Conread position: | 262-498 |
| Cow position: | chr5:37436830-37437075 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 65 |
| Conread position: | 262-538 |
| Cow position: | chr5:38853048-38853321 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 188, 79 |
| Conread position: | 262-538 |
| Cow position: | chr5:53055864-53055608 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 238, 71 |
| Conread position: | 262-567 |
| Cow position: | chr5:10261553-10261254 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 188, 78 |
| Conread position: | 262-573 |
| Cow position: | chr5:26561833-26562146 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 68 |
| Conread position: | 262-584 |
| Cow position: | chr5:70035088-70035398 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 132, 57 |
| Conread position: | 262-585 |
| Cow position: | chr5:5938013-5938325 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 233, 69 |
| Conread position: | 262-586 |
| Cow position: | chr5:360255-359940 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 188, 17 |
| Conread position: | 262-590 |
| Cow position: | chr5:21828545-21828875 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 192, 92 |
| Conread position: | 262-591 |
| Cow position: | chr5:45226140-45225816 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 77 |
| Conread position: | 262-591 |
| Cow position: | chr5:47704446-47704122 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 130, 79 |
| Conread position: | 263-601 |
| Cow position: | chr5:38805654-38805330 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 191, 74 |
| Conread position: | 264-594 |
| Cow position: | chr5:16508787-16509108 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 206, 74 |
| Conread position: | 267-517 |
| Cow position: | chr5:31103995-31104234 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 187, 57 |
| Conread position: | 270-594 |
| Cow position: | chr5:40233834-40234132 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 303, 54 |
| Conread position: | 283-588 |
| Cow position: | chr5:30332642-30332948 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 285-522 |
| Cow position: | chr5:21167424-21167190 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 162, 49 |
| Conread position: | 299-596 |
| Cow position: | chr5:70582182-70581883 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 202, 27 |
| Conread position: | 323-572 |
| Cow position: | chr5:51076910-51076659 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 7, 156 |
| Conread position: | 326-542 |
| Cow position: | chr5:68715575-68715788 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 24, 5 |
| Conread position: | 331-508 |
| Cow position: | chr5:31972995-31972814 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 331-568 |
| Cow position: | chr5:56753473-56753713 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 45 |
| Conread position: | 331-586 |
| Cow position: | chr5:29560155-29560409 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 108, 44 |
| Conread position: | 331-586 |
| Cow position: | chr5:30639105-30638860 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 46 |
| Conread position: | 331-587 |
| Cow position: | chr5:50900654-50900904 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 331-595 |
| Cow position: | chr5:37646806-37646533 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 109, 153 |
| Conread position: | 331-596 |
| Cow position: | chr5:33348009-33348259 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 332-594 |
| Cow position: | chr5:52165436-52165169 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 12, 45 |
| Conread position: | 335-508 |
| Cow position: | chr5:31913092-31913260 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 10 |
| Conread position: | 336-599 |
| Cow position: | chr5:1276725-1276449 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 338-591 |
| Cow position: | chr5:40109256-40109498 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 122, 15 |
| Conread position: | 340-586 |
| Cow position: | chr5:38832872-38833124 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 341-581 |
| Cow position: | chr5:33661612-33661854 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 109, 11 |
| Conread position: | 342-526 |
| Cow position: | chr5:14703211-14703023 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 343-591 |
| Cow position: | chr5:39094311-39094563 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 157, 42 |
| Conread position: | 344-578 |
| Cow position: | chr5:57327546-57327792 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 344-600 |
| Cow position: | chr5:4630887-4631137 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 225, 32 |
| Conread position: | 345-577 |
| Cow position: | chr5:72150010-72150241 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 169, 81 |
| Conread position: | 345-588 |
| Cow position: | chr5:26376328-26376558 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 345-588 |
| Cow position: | chr5:58144846-58144596 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 345-599 |
| Cow position: | chr5:41609065-41609303 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 345-600 |
| Cow position: | chr5:14153902-14154166 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 109, 250 |
| Conread position: | 345-600 |
| Cow position: | chr5:22934696-22934435 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 102, 41 |
| Conread position: | 345-600 |
| Cow position: | chr5:23535929-23536187 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 52, 179 |
| Conread position: | 345-600 |
| Cow position: | chr5:25919854-25919615 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 231, 31 |
| Conread position: | 345-600 |
| Cow position: | chr5:61488351-61488092 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 109, 31 |
| Conread position: | 345-600 |
| Cow position: | chr5:65924939-65924675 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 109, 31 |
| Conread position: | 345-601 |
| Cow position: | chr5:28946299-28946042 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 93, 31 |
| Conread position: | 346-538 |
| Cow position: | chr5:50729256-50729455 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 107, 31 |
| Conread position: | 346-553 |
| Cow position: | chr5:13691815-13691598 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 46, 31 |
| Conread position: | 346-566 |
| Cow position: | chr5:29827814-29828032 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 172, 28 |
| Conread position: | 346-577 |
| Cow position: | chr5:55756681-55756431 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 346-590 |
| Cow position: | chr5:56433562-56433810 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 103, 30 |
| Conread position: | 346-590 |
| Cow position: | chr5:59443490-59443246 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 107, 31 |
| Conread position: | 347-585 |
| Cow position: | chr5:35208023-35208266 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 105, 42 |
| Conread position: | 348-570 |
| Cow position: | chr5:43329930-43329706 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 92, 48 |
| Conread position: | 349-594 |
| Cow position: | chr5:6896374-6896115 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 43, 146 |
| Conread position: | 349-600 |
| Cow position: | chr5:68082203-68081960 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 350-600 |
| Cow position: | chr5:36854977-36855218 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 151, 26 |
| Conread position: | 353-571 |
| Cow position: | chr5:56384995-56385218 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 353-577 |
| Cow position: | chr5:45036788-45037015 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 354-594 |
| Cow position: | chr5:40388097-40387864 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 164, 31 |
| Conread position: | 356-526 |
| Cow position: | chr5:54530753-54530926 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 20 |
| Conread position: | 356-571 |
| Cow position: | chr5:27154793-27155012 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 70, 20 |
| Conread position: | 356-593 |
| Cow position: | chr5:39710610-39710852 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 96, 30 |
| Conread position: | 357-576 |
| Cow position: | chr5:34300697-34300909 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 161, 69 |
| Conread position: | 357-599 |
| Cow position: | chr5:37714133-37713881 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 191 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 71, 19 |
| Conread position: | 358-576 |
| Cow position: | chr5:51490981-51490765 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 140, 18 |
| Conread position: | 364-571 |
| Cow position: | chr5:72891972-72891769 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 21, 76 |
| Conread position: | 365-594 |
| Cow position: | chr5:1950280-1950052 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 153, 11 |
| Conread position: | 373-573 |
| Cow position: | chr5:57271478-57271275 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 53 |
| Conread position: | 375-570 |
| Cow position: | chr5:54111707-54111909 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 79, 97 |
| Conread position: | 375-573 |
| Cow position: | chr5:27411601-27411407 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 79, 23 |
| Conread position: | 375-588 |
| Cow position: | chr5:31660852-31660649 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 107 |
| Conread position: | 377-578 |
| Cow position: | chr5:62027156-62026952 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 124, 95 |
| Conread position: | 379-586 |
| Cow position: | chr5:49680495-49680288 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 24, 117 |
| Conread position: | 380-594 |
| Cow position: | chr5:1688319-1688102 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 72, 118 |
| Conread position: | 392-596 |
| Cow position: | chr5:31561341-31561547 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 99, 44 |
| Conread position: | 402-577 |
| Cow position: | chr5:36486301-36486488 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 410-594 |
| Cow position: | chr5:55928766-55928952 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 427-594 |
| Cow position: | chr5:16214528-16214695 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 91, 54 |
| Conread position: | 428-587 |
| Cow position: | chr5:54089880-54090038 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 104 |
| Conread position: | 428-599 |
| Cow position: | chr5:38629129-38629304 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 9, 114 |
| Conread position: | 431-573 |
| Cow position: | chr5:59356831-59356981 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 431-582 |
| Cow position: | chr5:33265602-33265458 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 435-587 |
| Cow position: | chr5:7921551-7921395 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 438-586 |
| Cow position: | chr5:39182059-39181908 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 72, 102 |
Show alignments to all cow chromosomes.