Cow genome map
| Conread name: | Ova1-OVRM10218A03 | 
| Conread position: | 175-590 | 
| Cow position: | chr9:30189568-30189144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 12 | 
| Conread position: | 208-583 | 
| Cow position: | chr9:32265968-32266343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 36, 130 | 
| Conread position: | 208-594 | 
| Cow position: | chr9:8724246-8723840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 32, 286 | 
| Conread position: | 217-587 | 
| Cow position: | chr9:34000195-34000570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 42, 115 | 
| Conread position: | 223-594 | 
| Cow position: | chr9:30440184-30440560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 24, 113 | 
| Conread position: | 223-600 | 
| Cow position: | chr9:8951327-8950945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 42 | 
| Conread position: | 239-601 | 
| Cow position: | chr9:2034555-2034212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 215, 26 | 
| Conread position: | 240-521 | 
| Cow position: | chr9:32306032-32306320 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 84, 37 | 
| Conread position: | 241-566 | 
| Cow position: | chr9:41789674-41789356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 120, 78 | 
| Conread position: | 249-581 | 
| Cow position: | chr9:1950303-1949976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 7, 111 | 
| Conread position: | 253-594 | 
| Cow position: | chr9:42445597-42445936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 5, 139 | 
| Conread position: | 256-555 | 
| Cow position: | chr9:55074763-55075051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 35, 40 | 
| Conread position: | 256-600 | 
| Cow position: | chr9:10666643-10666985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 46, 24 | 
| Conread position: | 257-574 | 
| Cow position: | chr9:8338421-8338092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 90, 126 | 
| Conread position: | 257-579 | 
| Cow position: | chr9:58674129-58673799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 6, 125 | 
| Conread position: | 257-586 | 
| Cow position: | chr9:15982711-15983030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 193, 53 | 
| Conread position: | 257-590 | 
| Cow position: | chr9:42998091-42998419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 85, 92 | 
| Conread position: | 261-461 | 
| Cow position: | chr9:64105353-64105145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 73, 122 | 
| Conread position: | 261-498 | 
| Cow position: | chr9:27085830-27085601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 261-523 | 
| Cow position: | chr9:19266786-19267045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 79, 110 | 
| Conread position: | 261-525 | 
| Cow position: | chr9:17568504-17568254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 239, 64 | 
| Conread position: | 261-531 | 
| Cow position: | chr9:20900748-20901018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 69, 119 | 
| Conread position: | 261-564 | 
| Cow position: | chr9:37069184-37069496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 81, 120 | 
| Conread position: | 261-567 | 
| Cow position: | chr9:1984139-1984455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 77, 118 | 
| Conread position: | 261-582 | 
| Cow position: | chr9:3169152-3169463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 185, 62 | 
| Conread position: | 261-587 | 
| Cow position: | chr9:4858905-4858589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 237, 62 | 
| Conread position: | 261-587 | 
| Cow position: | chr9:38961070-38961384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 226, 58 | 
| Conread position: | 261-587 | 
| Cow position: | chr9:56253268-56252948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 190, 83 | 
| Conread position: | 261-588 | 
| Cow position: | chr9:1520362-1520687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 123, 81 | 
| Conread position: | 261-590 | 
| Cow position: | chr9:26555833-26556156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 242, 37 | 
| Conread position: | 261-593 | 
| Cow position: | chr9:17310172-17310513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 7, 122 | 
| Conread position: | 261-594 | 
| Cow position: | chr9:24997137-24997476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 69 | 
| Conread position: | 261-595 | 
| Cow position: | chr9:52409088-52409416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 195, 70 | 
| Conread position: | 261-600 | 
| Cow position: | chr9:3932332-3932001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 190, 70 | 
| Conread position: | 261-600 | 
| Cow position: | chr9:8600722-8600367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 121 | 
| Conread position: | 261-600 | 
| Cow position: | chr9:15950775-15951116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 31 | 
| Conread position: | 262-481 | 
| Cow position: | chr9:50203169-50202957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 177, 57 | 
| Conread position: | 262-583 | 
| Cow position: | chr9:18162786-18163101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 204, 76 | 
| Conread position: | 262-587 | 
| Cow position: | chr9:35904385-35904695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 256, 68 | 
| Conread position: | 262-589 | 
| Cow position: | chr9:31077312-31077631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 242, 80 | 
| Conread position: | 262-600 | 
| Cow position: | chr9:9200355-9200683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 91 | 
| Conread position: | 262-601 | 
| Cow position: | chr9:33669087-33668770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 74, 114 | 
| Conread position: | 263-555 | 
| Cow position: | chr9:30402052-30402338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 203, 35 | 
| Conread position: | 263-590 | 
| Cow position: | chr9:47905915-47906229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 234, 91 | 
| Conread position: | 273-589 | 
| Cow position: | chr9:214108-214415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 149, 57 | 
| Conread position: | 274-505 | 
| Cow position: | chr9:38032783-38033010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 163, 101 | 
| Conread position: | 274-555 | 
| Cow position: | chr9:648128-647859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 196, 45 | 
| Conread position: | 274-583 | 
| Cow position: | chr9:11830362-11830065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 176, 57 | 
| Conread position: | 274-583 | 
| Cow position: | chr9:34310388-34310079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 180, 68 | 
| Conread position: | 274-590 | 
| Cow position: | chr9:21030671-21030360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 176, 64 | 
| Conread position: | 274-590 | 
| Cow position: | chr9:21459801-21460102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 17, 27 | 
| Conread position: | 274-590 | 
| Cow position: | chr9:34093060-34093387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 176, 102 | 
| Conread position: | 274-601 | 
| Cow position: | chr9:43037849-43037522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 101 | 
| Conread position: | 275-576 | 
| Cow position: | chr9:28726373-28726659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 243, 49 | 
| Conread position: | 277-600 | 
| Cow position: | chr9:39152336-39152642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 300, 65 | 
| Conread position: | 278-555 | 
| Cow position: | chr9:19714420-19714157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 222, 51 | 
| Conread position: | 297-580 | 
| Cow position: | chr9:22227754-22228025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 217, 45 | 
| Conread position: | 300-600 | 
| Cow position: | chr9:15215347-15215646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 164, 24 | 
| Conread position: | 305-594 | 
| Cow position: | chr9:52787202-52787495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 205, 26 | 
| Conread position: | 308-594 | 
| Cow position: | chr9:54924953-54924666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 146, 37 | 
| Conread position: | 311-601 | 
| Cow position: | chr9:27052006-27052301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 14 | 
| Conread position: | 312-600 | 
| Cow position: | chr9:39428487-39428759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 315-592 | 
| Cow position: | chr9:18072793-18073066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 27, 10 | 
| Conread position: | 319-573 | 
| Cow position: | chr9:2863750-2863494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 27, 9 | 
| Conread position: | 331-568 | 
| Cow position: | chr9:64007553-64007794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 82, 41 | 
| Conread position: | 331-577 | 
| Cow position: | chr9:34762544-34762787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 123, 36 | 
| Conread position: | 331-585 | 
| Cow position: | chr9:35533643-35533900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 153, 45 | 
| Conread position: | 331-587 | 
| Cow position: | chr9:44408341-44408092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 177, 44 | 
| Conread position: | 332-594 | 
| Cow position: | chr9:50544325-50544584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 184, 66 | 
| Conread position: | 333-507 | 
| Cow position: | chr9:33067353-33067172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 117, 43 | 
| Conread position: | 341-599 | 
| Cow position: | chr9:59924840-59924582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 6, 11 | 
| Conread position: | 343-511 | 
| Cow position: | chr9:53109819-53109661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 343-586 | 
| Cow position: | chr9:64516800-64517047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 110, 33 | 
| Conread position: | 343-593 | 
| Cow position: | chr9:62442578-62442336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 111, 33 | 
| Conread position: | 343-594 | 
| Cow position: | chr9:29808763-29808500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 343-595 | 
| Cow position: | chr9:1951973-1952225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 175, 33 | 
| Conread position: | 345-589 | 
| Cow position: | chr9:55084002-55084251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 166, 40 | 
| Conread position: | 345-594 | 
| Cow position: | chr9:38344190-38343934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 345-594 | 
| Cow position: | chr9:47926201-47925970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 346-572 | 
| Cow position: | chr9:5393344-5393114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 108, 30 | 
| Conread position: | 346-591 | 
| Cow position: | chr9:20848230-20847979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 93, 50 | 
| Conread position: | 346-594 | 
| Cow position: | chr9:4928923-4928674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 106, 29 | 
| Conread position: | 346-594 | 
| Cow position: | chr9:22114339-22114590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 130, 30 | 
| Conread position: | 346-600 | 
| Cow position: | chr9:5433925-5433673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 155, 30 | 
| Conread position: | 347-583 | 
| Cow position: | chr9:18002658-18002897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 153, 7 | 
| Conread position: | 347-585 | 
| Cow position: | chr9:45285238-45285474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 347-594 | 
| Cow position: | chr9:36067198-36066952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 158, 29 | 
| Conread position: | 347-599 | 
| Cow position: | chr9:18110577-18110828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 163, 20 | 
| Conread position: | 348-595 | 
| Cow position: | chr9:21888461-21888213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 155, 28 | 
| Conread position: | 353-587 | 
| Cow position: | chr9:51311957-51311719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 67, 23 | 
| Conread position: | 353-587 | 
| Cow position: | chr9:52633208-52633445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 84, 33 | 
| Conread position: | 353-590 | 
| Cow position: | chr9:13670924-13670686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 97, 185 | 
| Conread position: | 353-591 | 
| Cow position: | chr9:49404041-49403806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 52, 89 | 
| Conread position: | 353-591 | 
| Cow position: | chr9:64091975-64091732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 101, 23 | 
| Conread position: | 353-594 | 
| Cow position: | chr9:4861676-4861431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 100, 23 | 
| Conread position: | 353-598 | 
| Cow position: | chr9:18093377-18093627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 157, 23 | 
| Conread position: | 354-573 | 
| Cow position: | chr9:7634554-7634338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 16, 37 | 
| Conread position: | 354-590 | 
| Cow position: | chr9:5029801-5029561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 149, 22 | 
| Conread position: | 358-600 | 
| Cow position: | chr9:31587815-31588062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 99, 18 | 
| Conread position: | 359-576 | 
| Cow position: | chr9:2910399-2910185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 88, 17 | 
| Conread position: | 361-583 | 
| Cow position: | chr9:17806273-17806050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 37, 74 | 
| Conread position: | 366-593 | 
| Cow position: | chr9:32625270-32625050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 206, 10 | 
| Conread position: | 375-586 | 
| Cow position: | chr9:41995980-41995761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 376-572 | 
| Cow position: | chr9:23541153-23541342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 142, 50 | 
| Conread position: | 376-588 | 
| Cow position: | chr9:6225187-6225405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 127, 0 | 
| Conread position: | 376-593 | 
| Cow position: | chr9:2113739-2113960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 65, 176 | 
| Conread position: | 380-599 | 
| Cow position: | chr9:24399424-24399643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 19, 137 | 
| Conread position: | 400-576 | 
| Cow position: | chr9:48773582-48773408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 100, 54 | 
| Conread position: | 403-594 | 
| Cow position: | chr9:32816895-32817095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 420-600 | 
| Cow position: | chr9:11364114-11363932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 13, 26 | 
| Conread position: | 425-576 | 
| Cow position: | chr9:25469248-25469101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 440-593 | 
| Cow position: | chr9:48133930-48133771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 66, 0 | 
Show alignments to all cow chromosomes.
