Cow genome map
| Conread name: | Ova1-OVRM10218A03 |
| Conread position: | 204-536 |
| Cow position: | chrX:20801404-20801729 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 206-521 |
| Cow position: | chrX:19228443-19228126 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 52, 7 |
| Conread position: | 208-600 |
| Cow position: | chrX:33803386-33802988 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 281 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 42, 84 |
| Conread position: | 209-594 |
| Cow position: | chrX:39700848-39701234 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 120 |
| Conread position: | 209-600 |
| Cow position: | chrX:39546344-39545960 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 143 |
| Conread position: | 212-594 |
| Cow position: | chrX:5017771-5017402 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 215-448 |
| Cow position: | chrX:22325708-22325939 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 140 |
| Conread position: | 217-573 |
| Cow position: | chrX:41083543-41083917 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 28, 174 |
| Conread position: | 217-581 |
| Cow position: | chrX:30162641-30162996 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 126 |
| Conread position: | 218-601 |
| Cow position: | chrX:2146957-2147362 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 113 |
| Conread position: | 223-527 |
| Cow position: | chrX:26883505-26883191 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 27, 114 |
| Conread position: | 231-599 |
| Cow position: | chrX:2300583-2300940 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 120 |
| Conread position: | 250-505 |
| Cow position: | chrX:25404680-25404411 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 255-594 |
| Cow position: | chrX:31260948-31260610 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 195, 81 |
| Conread position: | 256-508 |
| Cow position: | chrX:3161332-3161090 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 132, 86 |
| Conread position: | 256-512 |
| Cow position: | chrX:32623249-32623513 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 112 |
| Conread position: | 256-580 |
| Cow position: | chrX:39558683-39558352 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 85, 219 |
| Conread position: | 256-582 |
| Cow position: | chrX:7645942-7646253 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 126, 75 |
| Conread position: | 256-582 |
| Cow position: | chrX:17964831-17964518 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 191, 53 |
| Conread position: | 257-582 |
| Cow position: | chrX:11844553-11844248 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 243, 65 |
| Conread position: | 257-582 |
| Cow position: | chrX:14884280-14883958 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 257-583 |
| Cow position: | chrX:43648062-43647746 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 8, 89 |
| Conread position: | 257-586 |
| Cow position: | chrX:42994299-42994617 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 196, 85 |
| Conread position: | 257-586 |
| Cow position: | chrX:43527188-43527513 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 229, 85 |
| Conread position: | 257-601 |
| Cow position: | chrX:38439156-38439499 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 8, 94 |
| Conread position: | 261-456 |
| Cow position: | chrX:6654621-6654431 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 261-508 |
| Cow position: | chrX:20653082-20653322 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 193, 70 |
| Conread position: | 261-508 |
| Cow position: | chrX:34009439-34009673 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 261-513 |
| Cow position: | chrX:9837809-9838070 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 84, 121 |
| Conread position: | 261-518 |
| Cow position: | chrX:15049161-15049411 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 95, 109 |
| Conread position: | 261-573 |
| Cow position: | chrX:7571595-7571894 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 257, 76 |
| Conread position: | 261-573 |
| Cow position: | chrX:9227295-9226987 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 172, 83 |
| Conread position: | 261-573 |
| Cow position: | chrX:11561832-11562148 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 186, 85 |
| Conread position: | 261-573 |
| Cow position: | chrX:12115730-12116037 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 236, 76 |
| Conread position: | 261-573 |
| Cow position: | chrX:35388218-35387911 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 189, 81 |
| Conread position: | 261-573 |
| Cow position: | chrX:40557987-40557690 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 253, 53 |
| Conread position: | 261-576 |
| Cow position: | chrX:19878726-19879038 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 154, 70 |
| Conread position: | 261-577 |
| Cow position: | chrX:37489407-37489718 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 89, 71 |
| Conread position: | 261-583 |
| Cow position: | chrX:38667945-38667616 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 83, 78 |
| Conread position: | 261-584 |
| Cow position: | chrX:24424703-24424385 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 261-585 |
| Cow position: | chrX:18695232-18694924 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 257, 83 |
| Conread position: | 261-586 |
| Cow position: | chrX:10412297-10411982 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 189, 84 |
| Conread position: | 261-586 |
| Cow position: | chrX:11718091-11717785 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 261-587 |
| Cow position: | chrX:2786857-2786553 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 261-588 |
| Cow position: | chrX:4044169-4043853 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 319, 58 |
| Conread position: | 261-590 |
| Cow position: | chrX:33827343-33827009 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 70 |
| Conread position: | 261-591 |
| Cow position: | chrX:11981810-11982144 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 178, 83 |
| Conread position: | 261-591 |
| Cow position: | chrX:13785689-13785350 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 158, 69 |
| Conread position: | 261-591 |
| Cow position: | chrX:34663170-34662840 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 28, 35 |
| Conread position: | 261-591 |
| Cow position: | chrX:35609675-35609998 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 195, 80 |
| Conread position: | 261-594 |
| Cow position: | chrX:1616362-1616032 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 83 |
| Conread position: | 261-594 |
| Cow position: | chrX:17631141-17630794 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 131 |
| Conread position: | 261-594 |
| Cow position: | chrX:25337866-25338197 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 83 |
| Conread position: | 261-596 |
| Cow position: | chrX:25232275-25232606 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 61 |
| Conread position: | 261-600 |
| Cow position: | chrX:40693071-40692736 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 95, 125 |
| Conread position: | 261-601 |
| Cow position: | chrX:11674747-11675082 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 73 |
| Conread position: | 262-555 |
| Cow position: | chrX:7695454-7695716 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 233, 23 |
| Conread position: | 262-573 |
| Cow position: | chrX:46532830-46532510 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 60, 69 |
| Conread position: | 262-578 |
| Cow position: | chrX:24105316-24105617 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 238, 80 |
| Conread position: | 262-581 |
| Cow position: | chrX:15485935-15485626 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 236, 60 |
| Conread position: | 262-583 |
| Cow position: | chrX:23564107-23563792 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 188, 73 |
| Conread position: | 262-587 |
| Cow position: | chrX:20029937-20030262 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 87 |
| Conread position: | 262-588 |
| Cow position: | chrX:917680-917361 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 51, 64 |
| Conread position: | 262-590 |
| Cow position: | chrX:22812752-22813072 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 190, 68 |
| Conread position: | 262-600 |
| Cow position: | chrX:28111185-28111525 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 69 |
| Conread position: | 267-562 |
| Cow position: | chrX:40035776-40035463 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 54, 218 |
| Conread position: | 267-584 |
| Cow position: | chrX:38007073-38006760 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 180, 75 |
| Conread position: | 267-585 |
| Cow position: | chrX:40269171-40269492 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 148, 75 |
| Conread position: | 274-499 |
| Cow position: | chrX:25163499-25163733 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 78, 23 |
| Conread position: | 274-508 |
| Cow position: | chrX:35633051-35632827 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 140, 45 |
| Conread position: | 274-512 |
| Cow position: | chrX:30355373-30355609 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 106 |
| Conread position: | 274-571 |
| Cow position: | chrX:35273046-35273344 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 68, 75 |
| Conread position: | 274-571 |
| Cow position: | chrX:45566310-45566625 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 274-591 |
| Cow position: | chrX:31949229-31948929 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 224, 68 |
| Conread position: | 274-596 |
| Cow position: | chrX:17271587-17271270 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 274-599 |
| Cow position: | chrX:32743240-32743552 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 68 |
| Conread position: | 274-600 |
| Cow position: | chrX:1978198-1978529 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 274-600 |
| Cow position: | chrX:5047195-5046880 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 198, 50 |
| Conread position: | 274-600 |
| Cow position: | chrX:36840569-36840888 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 57 |
| Conread position: | 277-527 |
| Cow position: | chrX:6607114-6607367 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 108 |
| Conread position: | 323-590 |
| Cow position: | chrX:40788943-40789217 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 326-584 |
| Cow position: | chrX:2383232-2383491 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 142, 5 |
| Conread position: | 326-599 |
| Cow position: | chrX:2648607-2648336 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 5 |
| Conread position: | 326-599 |
| Cow position: | chrX:8682187-8681910 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 127, 5 |
| Conread position: | 326-599 |
| Cow position: | chrX:10302079-10302354 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 49, 5 |
| Conread position: | 326-600 |
| Cow position: | chrX:25571252-25570978 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 65, 5 |
| Conread position: | 329-588 |
| Cow position: | chrX:17888661-17888413 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 331-498 |
| Cow position: | chrX:36154825-36154659 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 331-571 |
| Cow position: | chrX:11746589-11746836 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 45 |
| Conread position: | 331-577 |
| Cow position: | chrX:34502666-34502917 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 331-589 |
| Cow position: | chrX:33493522-33493783 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 119, 60 |
| Conread position: | 331-594 |
| Cow position: | chrX:27680150-27680407 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 331-600 |
| Cow position: | chrX:24259831-24259566 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 179, 45 |
| Conread position: | 331-600 |
| Cow position: | chrX:30862049-30862331 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 119, 45 |
| Conread position: | 332-576 |
| Cow position: | chrX:37048833-37048583 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 336-504 |
| Cow position: | chrX:6639876-6640044 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 336-578 |
| Cow position: | chrX:45113380-45113615 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 165, 39 |
| Conread position: | 336-589 |
| Cow position: | chrX:27432168-27431907 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 40 |
| Conread position: | 336-599 |
| Cow position: | chrX:29761930-29761670 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 111, 40 |
| Conread position: | 338-526 |
| Cow position: | chrX:17794739-17794927 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 180, 39 |
| Conread position: | 339-576 |
| Cow position: | chrX:42282191-42282422 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 165, 28 |
| Conread position: | 341-587 |
| Cow position: | chrX:40481114-40480863 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 113, 27 |
| Conread position: | 341-600 |
| Cow position: | chrX:36010133-36009897 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 345-517 |
| Cow position: | chrX:24193870-24194040 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 345-598 |
| Cow position: | chrX:7497006-7497256 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 182, 30 |
| Conread position: | 346-577 |
| Cow position: | chrX:34401759-34401993 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 86, 43 |
| Conread position: | 346-582 |
| Cow position: | chrX:32020360-32020121 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 152, 31 |
| Conread position: | 346-583 |
| Cow position: | chrX:9161350-9161586 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 154, 48 |
| Conread position: | 346-585 |
| Cow position: | chrX:27509258-27509019 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 162, 43 |
| Conread position: | 346-586 |
| Cow position: | chrX:40183588-40183340 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 108, 39 |
| Conread position: | 346-591 |
| Cow position: | chrX:45404072-45403819 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 108, 40 |
| Conread position: | 346-594 |
| Cow position: | chrX:8797010-8797265 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 107, 30 |
| Conread position: | 348-585 |
| Cow position: | chrX:45501912-45502148 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 106, 37 |
| Conread position: | 348-598 |
| Cow position: | chrX:25419397-25419141 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 28 |
| Conread position: | 350-586 |
| Cow position: | chrX:13382090-13382335 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 353-584 |
| Cow position: | chrX:17231503-17231735 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 143, 24 |
| Conread position: | 353-600 |
| Cow position: | chrX:18456161-18456421 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 101, 23 |
| Conread position: | 353-600 |
| Cow position: | chrX:32431396-32431639 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 65, 37 |
| Conread position: | 357-600 |
| Cow position: | chrX:16416281-16416525 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 97, 28 |
| Conread position: | 359-590 |
| Cow position: | chrX:20792043-20791810 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 151, 17 |
| Conread position: | 360-583 |
| Cow position: | chrX:17042466-17042694 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 94, 16 |
| Conread position: | 360-588 |
| Cow position: | chrX:630532-630303 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 88, 16 |
| Conread position: | 362-583 |
| Cow position: | chrX:36961414-36961644 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 88, 32 |
| Conread position: | 367-594 |
| Cow position: | chrX:29602050-29601819 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 374-594 |
| Cow position: | chrX:28836113-28835893 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 379-600 |
| Cow position: | chrX:29032208-29032430 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 137, 67 |
| Conread position: | 381-586 |
| Cow position: | chrX:18216072-18216290 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 396-585 |
| Cow position: | chrX:37781307-37781108 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 400-577 |
| Cow position: | chrX:25966855-25967030 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 123, 46 |
| Conread position: | 408-593 |
| Cow position: | chrX:36060974-36061168 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 177 |
| Conread position: | 408-600 |
| Cow position: | chrX:16514442-16514246 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 39, 181 |
| Conread position: | 422-581 |
| Cow position: | chrX:45633407-45633560 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 427-583 |
| Cow position: | chrX:31273090-31273246 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 83, 25 |
| Conread position: | 428-585 |
| Cow position: | chrX:27227966-27228131 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 431-600 |
| Cow position: | chrX:8913765-8913938 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 431-600 |
| Cow position: | chrX:8915509-8915682 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 432-600 |
| Cow position: | chrX:29055966-29056133 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 434-600 |
| Cow position: | chrX:34993988-34994146 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 450-594 |
| Cow position: | chrX:21566267-21566416 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 452-594 |
| Cow position: | chrX:41070804-41070949 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 112 |
| Conread position: | 456-600 |
| Cow position: | chrX:26493766-26493618 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
Show alignments to all cow chromosomes.