Cow genome map


           Conread name:
           Ova1-OVRM10218F05
        

               Conread position:
               1-230
               

               Cow position:
               chr18:1571157-1571388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               72, 96
               

               Conread position:
               1-360
               

               Cow position:
               chr18:44262710-44262345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 70
               

               Conread position:
               1-364
               

               Cow position:
               chr18:11779733-11779384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               79, 142
               

               Conread position:
               1-371
               

               Cow position:
               chr18:20641416-20641777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               265
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               82, 138
               

               Conread position:
               17-297
               

               Cow position:
               chr18:1954525-1954808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               67, 126
               

               Conread position:
               17-346
               

               Cow position:
               chr18:48713615-48713287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               67, 125
               

               Conread position:
               17-361
               

               Cow position:
               chr18:9365985-9365633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 139
               

               Conread position:
               18-322
               

               Cow position:
               chr18:18592536-18592233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 135
               

               Conread position:
               38-370
               

               Cow position:
               chr18:20126348-20126015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 117
               

               Conread position:
               39-361
               

               Cow position:
               chr18:5578349-5578025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 34
               

               Conread position:
               44-279
               

               Cow position:
               chr18:18369324-18369563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               44-361
               

               Cow position:
               chr18:4539845-4540151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 56
               
Show alignments to all cow chromosomes.