Cow genome map


           Conread name:
           Ova1-OVRM10218F05
        

               Conread position:
               1-184
               

               Cow position:
               chr28:4013202-4013022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               80, 136
               

               Conread position:
               1-228
               

               Cow position:
               chr28:16245947-16246174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               82, 183
               

               Conread position:
               1-360
               

               Cow position:
               chr28:3492666-3493024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 140
               

               Conread position:
               1-361
               

               Cow position:
               chr28:5204313-5203961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 242
               

               Conread position:
               17-357
               

               Cow position:
               chr28:21845059-21844719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 101
               

               Conread position:
               17-361
               

               Cow position:
               chr28:22346123-22345778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 166
               

               Conread position:
               34-360
               

               Cow position:
               chr28:5931436-5931113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               44-310
               

               Cow position:
               chr28:30937594-30937856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               31, 44
               

               Conread position:
               145-370
               

               Cow position:
               chr28:28076436-28076657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               48, 8
               

               Conread position:
               374-526
               

               Cow position:
               chr28:16200514-16200665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               26, 94
               

               Conread position:
               378-526
               

               Cow position:
               chr28:10252696-10252839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               385-526
               

               Cow position:
               chr28:11562028-11562168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 83
               
Show alignments to all cow chromosomes.