Cow genome map
| Conread name: | Ova1-OVRM10218F05 |
| Conread position: | 1-225 |
| Cow position: | chr3:78093300-78093521 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 80, 128 |
| Conread position: | 1-344 |
| Cow position: | chr3:3738570-3738232 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 67, 71 |
| Conread position: | 1-348 |
| Cow position: | chr3:13507557-13507207 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 259 |
| Conread position: | 1-361 |
| Cow position: | chr3:23408269-23408612 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 192, 136 |
| Conread position: | 1-361 |
| Cow position: | chr3:26681725-26682063 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-361 |
| Cow position: | chr3:80072217-80071847 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 5 |
| Conread position: | 16-197 |
| Cow position: | chr3:69785550-69785732 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 67, 140 |
| Conread position: | 17-179 |
| Cow position: | chr3:75608571-75608408 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 17-263 |
| Cow position: | chr3:26874663-26874415 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 135, 67 |
| Conread position: | 17-371 |
| Cow position: | chr3:56059884-56059524 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 29 |
| Conread position: | 26-357 |
| Cow position: | chr3:71161863-71161528 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 52, 245 |
| Conread position: | 39-371 |
| Cow position: | chr3:62789124-62789487 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 44-361 |
| Cow position: | chr3:53150377-53150057 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 101 |
| Conread position: | 45-234 |
| Cow position: | chr3:3883770-3883965 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 48-361 |
| Cow position: | chr3:83441849-83442149 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 30 |
| Conread position: | 172-370 |
| Cow position: | chr3:18393469-18393662 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 21, 106 |
| Conread position: | 228-384 |
| Cow position: | chr3:69207262-69207418 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 77, 71 |
| Conread position: | 363-526 |
| Cow position: | chr3:15443520-15443680 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 379-526 |
| Cow position: | chr3:18699917-18700062 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 99, 88 |
| Conread position: | 379-526 |
| Cow position: | chr3:22078270-22078124 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 379-526 |
| Cow position: | chr3:76168438-76168583 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 380-526 |
| Cow position: | chr3:72027829-72027685 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 380-652 |
| Cow position: | chr3:79138744-79139018 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 15 |
| Conread position: | 512-642 |
| Cow position: | chr3:15329308-15329439 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.