Cow genome map

Conread name: Ova1-OVRM10224H10

Conread position: 1-168
Cow position: chr1:9281793-9281965 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 86, 17

Conread position: 1-170
Cow position: chr1:56620880-56621054 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 86, 17

Conread position: 1-198
Cow position: chr1:82566843-82567045 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 86, 17

Conread position: 1-215
Cow position: chr1:15437278-15437059 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 86, 17

Conread position: 1-238
Cow position: chr1:88294005-88294251 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 86, 17

Conread position: 1-258
Cow position: chr1:7826613-7826879 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 86, 17

Conread position: 1-296
Cow position: chr1:30716042-30715738 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-339
Cow position: chr1:74284031-74283677 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 1-380
Cow position: chr1:90973594-90973995 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 17

Conread position: 1-390
Cow position: chr1:33364329-33363930 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-415
Cow position: chr1:11289965-11289542 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 17

Conread position: 1-551
Cow position: chr1:40533393-40532872 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 17

Conread position: 1-592
Cow position: chr1:92034741-92035340 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-613
Cow position: chr1:32565287-32564668 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 23

Conread position: 1-703
Cow position: chr1:8471519-8470809 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr1:8556327-8557039 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 17

Conread position: 1-703
Cow position: chr1:8745138-8745850 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr1:18963087-18962378 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 17

Conread position: 1-703
Cow position: chr1:19236870-19236144 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr1:29365048-29365759 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chr1:40057756-40058458 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 17

Conread position: 1-703
Cow position: chr1:49267523-49268237 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr1:54932567-54933281 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chr1:60341691-60342409 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chr1:61096138-61096853 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr1:61332321-61331610 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 18

Conread position: 1-703
Cow position: chr1:71794177-71794886 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr1:76877673-76878385 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chr1:77747386-77748096 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr1:82478625-82479336 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chr1:85794613-85795299 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 17

Conread position: 1-703
Cow position: chr1:86545496-86544785 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-707
Cow position: chr1:28713683-28714398 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-707
Cow position: chr1:86600375-86599658 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 17

Conread position: 1-712
Cow position: chr1:71560102-71559382 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 3-575
Cow position: chr1:33391713-33392298 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 15

Conread position: 13-629
Cow position: chr1:89767945-89767326 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 351

Conread position: 13-703
Cow position: chr1:81357993-81357303 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 143

Conread position: 14-207
Cow position: chr1:81861372-81861178 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 76, 111

Conread position: 14-218
Cow position: chr1:100888537-100888752 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 14-219
Cow position: chr1:67185949-67185740 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 74, 0

Conread position: 14-240
Cow position: chr1:45004897-45005133 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 52

Conread position: 14-245
Cow position: chr1:76740202-76739957 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 74, 0

Conread position: 14-296
Cow position: chr1:63048306-63048014 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 78, 144

Conread position: 14-321
Cow position: chr1:73444948-73444622 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 14-336
Cow position: chr1:22241380-22241714 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 14-362
Cow position: chr1:24572472-24572109 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 75

Conread position: 14-403
Cow position: chr1:53422550-53422949 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 126

Conread position: 14-413
Cow position: chr1:72309027-72308626 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 272
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 231

Conread position: 14-424
Cow position: chr1:68275159-68275575 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 125

Conread position: 14-432
Cow position: chr1:72113655-72114068 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 293

Conread position: 14-503
Cow position: chr1:75832684-75833192 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 276

Conread position: 14-533
Cow position: chr1:31596871-31597390 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 66

Conread position: 14-551
Cow position: chr1:16118152-16118674 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 173

Conread position: 14-558
Cow position: chr1:72598783-72599322 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 155

Conread position: 14-613
Cow position: chr1:42739064-42739670 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 45

Conread position: 14-639
Cow position: chr1:29902533-29901904 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 194

Conread position: 14-645
Cow position: chr1:101011265-101010620 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 20

Conread position: 14-656
Cow position: chr1:102551656-102552323 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 358

Conread position: 14-701
Cow position: chr1:31415570-31414876 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 183

Conread position: 14-702
Cow position: chr1:57659273-57659962 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 259

Conread position: 14-703
Cow position: chr1:21576200-21576895 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 20

Conread position: 14-703
Cow position: chr1:24441398-24440708 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 255

Conread position: 14-703
Cow position: chr1:24654501-24655183 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 66

Conread position: 14-703
Cow position: chr1:27493626-27494308 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 238

Conread position: 14-703
Cow position: chr1:28676738-28677408 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 148

Conread position: 14-703
Cow position: chr1:31239576-31238882 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 350

Conread position: 14-703
Cow position: chr1:38477966-38478658 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 61

Conread position: 14-703
Cow position: chr1:56424560-56425263 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 250

Conread position: 14-703
Cow position: chr1:61562686-61563390 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 351

Conread position: 14-703
Cow position: chr1:73762878-73762192 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 180

Conread position: 14-703
Cow position: chr1:79633903-79633199 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 353

Conread position: 14-703
Cow position: chr1:86704799-86705491 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 359

Conread position: 14-703
Cow position: chr1:90606204-90605523 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 85

Conread position: 14-703
Cow position: chr1:100420253-100420951 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 15

Conread position: 14-703
Cow position: chr1:101833054-101833753 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 363

Conread position: 14-710
Cow position: chr1:40510601-40509892 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 153

Conread position: 14-712
Cow position: chr1:31363448-31362749 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 322

Conread position: 15-188
Cow position: chr1:20831504-20831686 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 15-242
Cow position: chr1:59206418-59206179 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 15-259
Cow position: chr1:82655301-82655552 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 72, 161

Conread position: 15-296
Cow position: chr1:13437813-13437519 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 15-325
Cow position: chr1:31530935-31531259 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 72, 0

Conread position: 15-360
Cow position: chr1:9525696-9525333 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 15-365
Cow position: chr1:57422161-57421800 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 225
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 31, 26

Conread position: 15-383
Cow position: chr1:7164740-7165123 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 349

Conread position: 15-394
Cow position: chr1:17010040-17009646 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 353

Conread position: 15-407
Cow position: chr1:29608450-29608043 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 10

Conread position: 15-472
Cow position: chr1:99989156-99989628 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 348

Conread position: 15-507
Cow position: chr1:39546432-39546940 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 249

Conread position: 15-516
Cow position: chr1:40577589-40578107 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 403

Conread position: 15-521
Cow position: chr1:73434675-73434155 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 352

Conread position: 15-542
Cow position: chr1:33898918-33899447 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 161

Conread position: 15-543
Cow position: chr1:70863692-70864230 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 36

Conread position: 15-662
Cow position: chr1:70069315-70069990 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 357

Conread position: 15-666
Cow position: chr1:4209263-4208597 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 352

Conread position: 15-693
Cow position: chr1:7196569-7195876 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 357

Conread position: 15-698
Cow position: chr1:67832491-67831788 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 352

Conread position: 15-703
Cow position: chr1:9261155-9261849 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 359

Conread position: 15-703
Cow position: chr1:14529804-14529107 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 20

Conread position: 15-703
Cow position: chr1:17033939-17033242 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 329

Conread position: 15-703
Cow position: chr1:21090100-21090818 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 27

Conread position: 15-703
Cow position: chr1:35599154-35598458 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 354

Conread position: 15-703
Cow position: chr1:56169610-56170313 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 329

Conread position: 15-703
Cow position: chr1:59484213-59483510 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 352

Conread position: 15-703
Cow position: chr1:62927119-62927822 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 346

Conread position: 15-703
Cow position: chr1:67005533-67006231 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 145

Conread position: 15-703
Cow position: chr1:69769463-69770172 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 358

Conread position: 15-703
Cow position: chr1:89431056-89431756 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 52

Conread position: 15-703
Cow position: chr1:91901673-91902372 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 348

Conread position: 15-705
Cow position: chr1:40682078-40681376 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 354

Conread position: 15-712
Cow position: chr1:14562560-14561848 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 355

Conread position: 15-712
Cow position: chr1:91104693-91105410 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 351

Conread position: 18-173
Cow position: chr1:30693733-30693891 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 18-208
Cow position: chr1:100593264-100593065 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 67, 0

Conread position: 18-318
Cow position: chr1:84442338-84442012 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 18-344
Cow position: chr1:56191495-56191155 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 271

Conread position: 18-415
Cow position: chr1:21995356-21994949 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 131

Conread position: 18-550
Cow position: chr1:40965747-40965206 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 53

Conread position: 18-550
Cow position: chr1:67289071-67289609 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 16

Conread position: 18-550
Cow position: chr1:79454313-79453767 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 352

Conread position: 18-583
Cow position: chr1:13251862-13251283 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 103

Conread position: 18-620
Cow position: chr1:61140094-61140691 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 121

Conread position: 18-621
Cow position: chr1:10011659-10011048 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 10

Conread position: 18-664
Cow position: chr1:22617752-22617095 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 176

Conread position: 18-701
Cow position: chr1:61343059-61342355 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 350

Conread position: 18-703
Cow position: chr1:3383661-3382966 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 328

Conread position: 18-703
Cow position: chr1:5504594-5505291 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 35

Conread position: 18-703
Cow position: chr1:6197640-6196925 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 341

Conread position: 18-703
Cow position: chr1:10725278-10725977 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 24

Conread position: 18-703
Cow position: chr1:17437021-17436324 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 10

Conread position: 18-703
Cow position: chr1:18195279-18195948 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 175

Conread position: 18-703
Cow position: chr1:21114748-21114070 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 140

Conread position: 18-703
Cow position: chr1:21377903-21377205 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 41

Conread position: 18-703
Cow position: chr1:26812417-26811721 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 41

Conread position: 18-703
Cow position: chr1:33548746-33548048 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 402

Conread position: 18-703
Cow position: chr1:53309978-53309306 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 64

Conread position: 18-703
Cow position: chr1:56141700-56141004 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 348

Conread position: 18-703
Cow position: chr1:56725826-56726516 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 345

Conread position: 18-703
Cow position: chr1:57363676-57362980 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 272

Conread position: 18-703
Cow position: chr1:57570491-57571185 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 186

Conread position: 18-703
Cow position: chr1:63603131-63602435 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 349

Conread position: 18-703
Cow position: chr1:69405811-69406511 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 349

Conread position: 18-703
Cow position: chr1:72986114-72986811 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 271

Conread position: 18-703
Cow position: chr1:73064681-73063985 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 348

Conread position: 18-703
Cow position: chr1:82921496-82920786 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 149

Conread position: 18-703
Cow position: chr1:85777806-85777106 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 345

Conread position: 18-703
Cow position: chr1:86593650-86592951 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 142

Conread position: 18-703
Cow position: chr1:90912482-90913182 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 44

Conread position: 18-703
Cow position: chr1:93857175-93857875 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 355

Conread position: 18-703
Cow position: chr1:100708725-100709424 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 308

Conread position: 18-706
Cow position: chr1:100509403-100510104 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 346

Conread position: 18-707
Cow position: chr1:91890739-91890036 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 47

Conread position: 18-712
Cow position: chr1:89186785-89186097 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 41

Conread position: 19-247
Cow position: chr1:101671693-101671458 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 186

Conread position: 19-348
Cow position: chr1:19184799-19185148 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 19-409
Cow position: chr1:39142503-39142109 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 255
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 66, 86

Conread position: 19-553
Cow position: chr1:86506974-86506418 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 356

Conread position: 20-710
Cow position: chr1:89483784-89484459 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 34

Conread position: 21-187
Cow position: chr1:26515721-26515546 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 21-190
Cow position: chr1:32071596-32071774 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 54, 64

Conread position: 21-242
Cow position: chr1:58274926-58275152 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 67, 149

Conread position: 21-294
Cow position: chr1:86612754-86613036 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 56, 83

Conread position: 21-344
Cow position: chr1:24563078-24562741 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 68

Conread position: 21-344
Cow position: chr1:55318984-55318649 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 141

Conread position: 21-354
Cow position: chr1:48827324-48827677 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 148

Conread position: 21-362
Cow position: chr1:102776472-102776114 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 67, 19

Conread position: 21-377
Cow position: chr1:21353791-21353420 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 250
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 63, 241

Conread position: 21-378
Cow position: chr1:67911421-67911781 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 98

Conread position: 21-407
Cow position: chr1:53366577-53366984 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 38

Conread position: 21-420
Cow position: chr1:88676140-88676552 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 182

Conread position: 21-469
Cow position: chr1:13580095-13579632 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 155

Conread position: 21-499
Cow position: chr1:31400747-31400261 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 268

Conread position: 21-501
Cow position: chr1:39481285-39480789 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 336
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 42, 368

Conread position: 21-578
Cow position: chr1:72184206-72183650 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 123

Conread position: 21-597
Cow position: chr1:93112715-93112120 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 267

Conread position: 21-608
Cow position: chr1:41518169-41517575 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 21-619
Cow position: chr1:87723031-87722418 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 351

Conread position: 21-624
Cow position: chr1:21544447-21545047 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 154

Conread position: 21-633
Cow position: chr1:3669469-3668837 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 22

Conread position: 21-634
Cow position: chr1:98657289-98656669 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 98

Conread position: 21-646
Cow position: chr1:23579137-23578510 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 134

Conread position: 21-680
Cow position: chr1:12058862-12058190 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 231

Conread position: 21-701
Cow position: chr1:94662335-94663004 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 67

Conread position: 21-703
Cow position: chr1:11199973-11199277 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 39

Conread position: 21-703
Cow position: chr1:23970151-23969440 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 350

Conread position: 21-703
Cow position: chr1:28875748-28876450 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 351

Conread position: 21-703
Cow position: chr1:30103921-30103224 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 346

Conread position: 21-703
Cow position: chr1:33853938-33854620 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 346

Conread position: 21-703
Cow position: chr1:40919796-40920491 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 343

Conread position: 21-703
Cow position: chr1:46613632-46612944 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 126

Conread position: 21-703
Cow position: chr1:55144704-55145398 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 348

Conread position: 21-703
Cow position: chr1:55779528-55780224 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 351

Conread position: 21-703
Cow position: chr1:57121146-57120478 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 186

Conread position: 21-703
Cow position: chr1:68602967-68602277 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 44

Conread position: 21-703
Cow position: chr1:70388650-70387974 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 56

Conread position: 21-703
Cow position: chr1:72086253-72086952 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 19

Conread position: 21-703
Cow position: chr1:82369086-82369771 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 181

Conread position: 21-703
Cow position: chr1:82910174-82909479 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 347

Conread position: 21-703
Cow position: chr1:89111491-89112175 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 38

Conread position: 21-703
Cow position: chr1:99916093-99916792 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 397

Conread position: 21-704
Cow position: chr1:57970932-57970239 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 339

Conread position: 21-706
Cow position: chr1:102322439-102321761 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 14

Conread position: 21-708
Cow position: chr1:57525942-57526637 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 13

Conread position: 21-708
Cow position: chr1:76701996-76701312 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 71

Conread position: 21-710
Cow position: chr1:46838458-46839153 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 16

Conread position: 21-712
Cow position: chr1:18281641-18282342 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 173

Conread position: 21-712
Cow position: chr1:21458361-21459047 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 21

Conread position: 21-712
Cow position: chr1:23098310-23099004 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 269

Conread position: 21-712
Cow position: chr1:58339587-58340282 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 294

Conread position: 22-382
Cow position: chr1:72036635-72036276 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 44

Conread position: 22-703
Cow position: chr1:61203039-61203737 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 347

Conread position: 22-703
Cow position: chr1:82863474-82864174 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 342

Conread position: 23-644
Cow position: chr1:58088886-58088260 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 328

Conread position: 23-701
Cow position: chr1:92554099-92553426 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 133

Conread position: 24-292
Cow position: chr1:16273218-16273497 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 259

Conread position: 24-538
Cow position: chr1:29949148-29948637 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 26

Conread position: 25-703
Cow position: chr1:76618810-76618121 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 102

Conread position: 28-703
Cow position: chr1:16974453-16973759 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 30-703
Cow position: chr1:29037207-29037893 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 333

Conread position: 30-703
Cow position: chr1:55274372-55273689 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 340

Conread position: 30-703
Cow position: chr1:76872550-76873235 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 169

Conread position: 30-706
Cow position: chr1:58171405-58172094 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 337

Conread position: 30-708
Cow position: chr1:31191741-31191061 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 29

Conread position: 30-712
Cow position: chr1:92280119-92279443 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 186

Conread position: 33-296
Cow position: chr1:25054951-25055224 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 259

Conread position: 33-410
Cow position: chr1:55328743-55328358 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 123

Conread position: 33-701
Cow position: chr1:89090873-89090186 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 8

Conread position: 39-344
Cow position: chr1:9513972-9513658 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 39-578
Cow position: chr1:69246507-69247040 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 323

Conread position: 39-703
Cow position: chr1:21677487-21678153 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 26

Conread position: 39-703
Cow position: chr1:66972481-66971806 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 128

Conread position: 40-524
Cow position: chr1:93426617-93426124 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 331
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 48, 216

Conread position: 42-703
Cow position: chr1:100451972-100451321 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 100

Conread position: 45-389
Cow position: chr1:52356588-52356230 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 318

Conread position: 45-395
Cow position: chr1:89493532-89493168 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 322

Conread position: 45-633
Cow position: chr1:56449939-56450528 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 362
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 145, 41

Conread position: 45-703
Cow position: chr1:9263425-9262752 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 322

Conread position: 45-703
Cow position: chr1:18025130-18024467 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 334

Conread position: 48-703
Cow position: chr1:84446369-84447035 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 121

Conread position: 51-703
Cow position: chr1:63045572-63046238 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 163

Conread position: 51-703
Cow position: chr1:81301804-81302469 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 238

Conread position: 61-703
Cow position: chr1:102432043-102431386 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 300

Conread position: 64-703
Cow position: chr1:66490282-66490934 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 145

Conread position: 67-647
Cow position: chr1:54115970-54116545 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 17

Conread position: 67-709
Cow position: chr1:53371069-53371717 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 37

Conread position: 81-692
Cow position: chr1:58197711-58197099 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 32

Conread position: 84-440
Cow position: chr1:31497641-31497992 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 18, 44

Conread position: 84-584
Cow position: chr1:79254782-79255259 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 99

Conread position: 87-415
Cow position: chr1:98617198-98617529 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 182

Conread position: 87-447
Cow position: chr1:37677426-37677063 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 277

Conread position: 87-541
Cow position: chr1:22222754-22223214 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 277

Conread position: 87-586
Cow position: chr1:11666832-11666326 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 272

Conread position: 87-617
Cow position: chr1:73384212-73384732 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 111

Conread position: 87-666
Cow position: chr1:99108503-99107911 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 247

Conread position: 87-701
Cow position: chr1:17939017-17938403 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 107

Conread position: 87-701
Cow position: chr1:51966994-51967600 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 167

Conread position: 87-703
Cow position: chr1:13405656-13405033 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 273

Conread position: 87-703
Cow position: chr1:25552538-25553157 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 23

Conread position: 87-703
Cow position: chr1:30065091-30065731 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 288

Conread position: 87-703
Cow position: chr1:65389289-65389910 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 275

Conread position: 87-703
Cow position: chr1:78922280-78921660 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 269

Conread position: 87-703
Cow position: chr1:88178588-88179212 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 277

Conread position: 87-707
Cow position: chr1:72138934-72139551 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 158

Conread position: 87-712
Cow position: chr1:12802812-12803457 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 302

Conread position: 87-712
Cow position: chr1:28414480-28413857 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 88-703
Cow position: chr1:61748708-61748098 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 33

Conread position: 90-712
Cow position: chr1:63045414-63044793 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 50

Conread position: 91-703
Cow position: chr1:30078682-30079294 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 77

Conread position: 98-496
Cow position: chr1:100341164-100340766 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 261
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 84, 30

Conread position: 101-514
Cow position: chr1:20378423-20378831 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 287
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 117, 41

Conread position: 101-530
Cow position: chr1:76850036-76849603 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 261

Conread position: 101-702
Cow position: chr1:56745620-56746236 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 268

Conread position: 101-703
Cow position: chr1:20847258-20846660 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 35

Conread position: 101-703
Cow position: chr1:77866317-77866911 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 40

Conread position: 102-506
Cow position: chr1:54164289-54163895 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 167

Conread position: 102-703
Cow position: chr1:23039843-23040442 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 36

Conread position: 102-703
Cow position: chr1:34684244-34684839 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 173

Conread position: 102-712
Cow position: chr1:96194424-96193783 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 169

Conread position: 104-468
Cow position: chr1:34532797-34533166 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 248

Conread position: 105-347
Cow position: chr1:58217027-58217271 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 113, 88

Conread position: 105-585
Cow position: chr1:17949231-17949728 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 255

Conread position: 105-645
Cow position: chr1:86363222-86363765 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 176

Conread position: 105-703
Cow position: chr1:79553248-79553846 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 23

Conread position: 110-712
Cow position: chr1:16798342-16797734 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 17

Conread position: 114-441
Cow position: chr1:6211998-6212330 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 245

Conread position: 114-703
Cow position: chr1:91672990-91673585 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 240

Conread position: 116-703
Cow position: chr1:32961743-32961150 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 247

Conread position: 117-703
Cow position: chr1:9377727-9377127 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 151

Conread position: 126-415
Cow position: chr1:52053316-52053608 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 127

Conread position: 126-542
Cow position: chr1:14361701-14361280 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 237

Conread position: 129-711
Cow position: chr1:31392522-31391928 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 129-712
Cow position: chr1:56645105-56644523 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 151

Conread position: 130-607
Cow position: chr1:57744455-57743966 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 334
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 87, 142

Conread position: 132-689
Cow position: chr1:26607787-26607231 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 150

Conread position: 134-703
Cow position: chr1:8827798-8828374 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 230

Conread position: 135-528
Cow position: chr1:42054741-42054350 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 73

Conread position: 138-413
Cow position: chr1:88532463-88532188 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 36

Conread position: 142-639
Cow position: chr1:20648226-20648729 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 125

Conread position: 142-661
Cow position: chr1:21134321-21133796 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 212

Conread position: 143-439
Cow position: chr1:29704853-29704559 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 160, 214

Conread position: 143-703
Cow position: chr1:22530011-22529458 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 202

Conread position: 146-703
Cow position: chr1:97285868-97285301 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 138

Conread position: 150-550
Cow position: chr1:79335384-79334979 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 203

Conread position: 151-703
Cow position: chr1:72767231-72766684 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 206

Conread position: 154-476
Cow position: chr1:23658224-23658550 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 209

Conread position: 154-643
Cow position: chr1:96094923-96095413 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 311
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 114

Conread position: 154-645
Cow position: chr1:21431501-21431013 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 126

Conread position: 159-443
Cow position: chr1:83170443-83170732 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 204

Conread position: 159-703
Cow position: chr1:20831688-20832235 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 121

Conread position: 159-703
Cow position: chr1:52172006-52171445 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 204

Conread position: 161-682
Cow position: chr1:8528615-8528083 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 356
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 42, 108

Conread position: 161-703
Cow position: chr1:63341664-63341119 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 119

Conread position: 165-592
Cow position: chr1:67001019-67001452 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 193

Conread position: 166-703
Cow position: chr1:33040228-33039679 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 194

Conread position: 170-703
Cow position: chr1:52755716-52755179 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 6

Conread position: 170-703
Cow position: chr1:73565663-73565125 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 187

Conread position: 175-563
Cow position: chr1:95766470-95766081 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 81

Conread position: 178-692
Cow position: chr1:17250793-17251312 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 162
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 180

Conread position: 180-453
Cow position: chr1:18024003-18023727 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 39, 178

Conread position: 183-703
Cow position: chr1:19441698-19441187 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 177

Conread position: 183-703
Cow position: chr1:51392923-51393435 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 172

Conread position: 184-703
Cow position: chr1:18487349-18486824 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 174

Conread position: 185-707
Cow position: chr1:22481827-22481299 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 166

Conread position: 186-703
Cow position: chr1:60251596-60251073 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 177

Conread position: 193-624
Cow position: chr1:11018282-11018709 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 164

Conread position: 194-703
Cow position: chr1:31351923-31351415 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 86

Conread position: 195-627
Cow position: chr1:81001504-81001084 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 283
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 114

Conread position: 195-712
Cow position: chr1:56631228-56631747 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 168

Conread position: 196-649
Cow position: chr1:26142368-26141908 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 157

Conread position: 202-513
Cow position: chr1:4336074-4336383 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 18, 158

Conread position: 202-703
Cow position: chr1:21133017-21132522 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 152

Conread position: 204-652
Cow position: chr1:59203416-59202961 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 155

Conread position: 205-505
Cow position: chr1:99016172-99015870 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 204
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 5

Conread position: 206-703
Cow position: chr1:48249565-48250069 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 160

Conread position: 209-703
Cow position: chr1:37542447-37541953 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 31

Conread position: 212-703
Cow position: chr1:68819041-68818556 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 28

Conread position: 213-649
Cow position: chr1:22287405-22287833 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 144

Conread position: 214-586
Cow position: chr1:100912004-100912378 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 130

Conread position: 215-592
Cow position: chr1:72804646-72804266 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 144

Conread position: 221-457
Cow position: chr1:6164832-6165067 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 48, 43

Conread position: 221-645
Cow position: chr1:99864787-99865215 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 281
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 79, 71

Conread position: 222-703
Cow position: chr1:26587821-26588303 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 137

Conread position: 222-703
Cow position: chr1:61340450-61339967 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 132

Conread position: 222-703
Cow position: chr1:69504501-69504021 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 113

Conread position: 223-703
Cow position: chr1:28812371-28811889 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 131

Conread position: 227-468
Cow position: chr1:82090789-82091031 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 72, 123

Conread position: 228-643
Cow position: chr1:76852286-76852708 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 135

Conread position: 228-703
Cow position: chr1:38711589-38712065 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 58

Conread position: 229-484
Cow position: chr1:68446272-68446529 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 73, 36

Conread position: 229-592
Cow position: chr1:20867726-20867363 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 109

Conread position: 229-592
Cow position: chr1:39889016-39889381 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 130

Conread position: 229-703
Cow position: chr1:33715834-33716313 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 176

Conread position: 229-703
Cow position: chr1:48345062-48345523 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 125

Conread position: 230-703
Cow position: chr1:8603084-8602623 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 61

Conread position: 232-703
Cow position: chr1:7837868-7837408 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 96

Conread position: 233-532
Cow position: chr1:24203766-24203481 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 43

Conread position: 233-592
Cow position: chr1:10033391-10033753 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 117

Conread position: 233-633
Cow position: chr1:50372180-50371780 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 274
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 39

Conread position: 240-551
Cow position: chr1:57397461-57397144 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 121

Conread position: 240-646
Cow position: chr1:80667094-80667510 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 269
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 124

Conread position: 240-662
Cow position: chr1:57635934-57635506 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 116

Conread position: 246-703
Cow position: chr1:62731697-62732159 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 95

Conread position: 250-701
Cow position: chr1:63048477-63048929 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 109

Conread position: 256-533
Cow position: chr1:7299929-7300205 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 44, 8

Conread position: 257-404
Cow position: chr1:70866075-70866224 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 102

Conread position: 257-703
Cow position: chr1:13438029-13438472 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 19

Conread position: 257-703
Cow position: chr1:31106488-31106040 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 97

Conread position: 267-616
Cow position: chr1:4453859-4453518 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 76

Conread position: 267-703
Cow position: chr1:15149728-15149290 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 267-703
Cow position: chr1:18087344-18087782 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 92

Conread position: 267-703
Cow position: chr1:48811278-48810841 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 87

Conread position: 267-703
Cow position: chr1:85630251-85630689 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 92

Conread position: 271-703
Cow position: chr1:69671701-69671268 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 14

Conread position: 277-703
Cow position: chr1:75402826-75403247 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 11

Conread position: 281-464
Cow position: chr1:81305706-81305889 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 71

Conread position: 283-587
Cow position: chr1:5492069-5492363 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 17, 71

Conread position: 283-703
Cow position: chr1:101524456-101524047 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 76

Conread position: 285-703
Cow position: chr1:20527094-20527513 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 73

Conread position: 299-570
Cow position: chr1:83108658-83108391 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 47

Conread position: 300-533
Cow position: chr1:59592867-59592639 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 184, 55

Conread position: 300-561
Cow position: chr1:32100140-32099882 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 300-687
Cow position: chr1:45005921-45006311 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 38

Conread position: 300-703
Cow position: chr1:19161921-19162321 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 300-703
Cow position: chr1:25053635-25053234 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 300-703
Cow position: chr1:47118909-47119310 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 300-703
Cow position: chr1:57505743-57506144 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 300-703
Cow position: chr1:61220387-61220783 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 52

Conread position: 300-703
Cow position: chr1:67078872-67078474 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 300-703
Cow position: chr1:78587506-78587105 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 300-703
Cow position: chr1:95474936-95474549 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 300-712
Cow position: chr1:56205858-56205442 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 301-586
Cow position: chr1:3743292-3743010 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 151, 48

Conread position: 301-639
Cow position: chr1:70381594-70381257 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 51

Conread position: 301-706
Cow position: chr1:11771836-11771434 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 48

Conread position: 302-702
Cow position: chr1:99572602-99572214 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 24

Conread position: 304-649
Cow position: chr1:63035579-63035921 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 51

Conread position: 305-707
Cow position: chr1:57574623-57574228 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 48

Conread position: 313-712
Cow position: chr1:73443884-73443491 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 42

Conread position: 314-453
Cow position: chr1:77557809-77557674 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 314-626
Cow position: chr1:56653361-56653054 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 205
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 205, 32

Conread position: 314-707
Cow position: chr1:29461294-29461686 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 41

Conread position: 315-703
Cow position: chr1:47455010-47454627 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 40

Conread position: 318-703
Cow position: chr1:83135930-83136295 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 37

Conread position: 321-544
Cow position: chr1:84442937-84443157 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 139, 34

Conread position: 322-476
Cow position: chr1:67949393-67949544 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 130, 33

Conread position: 323-510
Cow position: chr1:80902603-80902420 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 324-703
Cow position: chr1:31534828-31535205 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 31

Conread position: 325-450
Cow position: chr1:49267298-49267419 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 325-703
Cow position: chr1:28520628-28521004 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 30

Conread position: 329-527
Cow position: chr1:35711648-35711842 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 123, 24

Conread position: 329-638
Cow position: chr1:67317683-67317993 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 108, 10

Conread position: 331-693
Cow position: chr1:1023816-1023455 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 24

Conread position: 334-544
Cow position: chr1:55318538-55318334 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 335-703
Cow position: chr1:79589847-79590204 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 12

Conread position: 343-703
Cow position: chr1:7711776-7712133 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 33

Conread position: 348-712
Cow position: chr1:30034626-30034985 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 54

Conread position: 352-703
Cow position: chr1:14241058-14240714 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 49

Conread position: 355-539
Cow position: chr1:81861033-81860849 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 100, 57

Conread position: 355-542
Cow position: chr1:100606705-100606891 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 355-662
Cow position: chr1:90865045-90865348 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-703
Cow position: chr1:3970260-3969911 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 56

Conread position: 355-703
Cow position: chr1:19776087-19775738 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-703
Cow position: chr1:38279735-38279386 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-703
Cow position: chr1:51883619-51883962 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-703
Cow position: chr1:68145967-68145618 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-703
Cow position: chr1:77656552-77656896 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 46

Conread position: 356-703
Cow position: chr1:73403793-73404133 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 235
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 106, 46

Conread position: 357-703
Cow position: chr1:58192799-58192453 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 48

Conread position: 357-703
Cow position: chr1:72812167-72812513 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 45

Conread position: 358-703
Cow position: chr1:45021241-45021579 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 32

Conread position: 358-712
Cow position: chr1:20001992-20001632 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 44

Conread position: 360-703
Cow position: chr1:21353308-21352964 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 19

Conread position: 360-703
Cow position: chr1:55044253-55043909 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 42

Conread position: 360-703
Cow position: chr1:88984439-88984099 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 42

Conread position: 360-712
Cow position: chr1:92008282-92008637 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 41

Conread position: 362-624
Cow position: chr1:17765390-17765653 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 50

Conread position: 362-702
Cow position: chr1:77104351-77103998 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 41

Conread position: 362-703
Cow position: chr1:7324082-7324424 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 362-703
Cow position: chr1:52067638-52067980 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 362-703
Cow position: chr1:58418687-58419024 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 39

Conread position: 362-703
Cow position: chr1:83169451-83169795 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 50

Conread position: 363-703
Cow position: chr1:26537174-26536833 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 38

Conread position: 364-703
Cow position: chr1:53519680-53520015 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 6

Conread position: 364-703
Cow position: chr1:70051254-70051591 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 37

Conread position: 364-703
Cow position: chr1:85807597-85807262 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 47

Conread position: 367-703
Cow position: chr1:80565061-80564724 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 34

Conread position: 369-703
Cow position: chr1:98354377-98354042 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 32

Conread position: 372-699
Cow position: chr1:30371926-30372254 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 29

Conread position: 382-652
Cow position: chr1:22778853-22778588 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 77, 33

Conread position: 382-703
Cow position: chr1:85337907-85338224 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 21

Conread position: 388-666
Cow position: chr1:2006654-2006379 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 23

Conread position: 394-658
Cow position: chr1:475221-475485 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 17

Conread position: 406-712
Cow position: chr1:58440239-58439931 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 166, 64

Conread position: 410-586
Cow position: chr1:4375883-4375706 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 87

Conread position: 410-701
Cow position: chr1:21785545-21785831 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 41, 61

Conread position: 414-712
Cow position: chr1:98617735-98618033 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 279

Conread position: 420-703
Cow position: chr1:13718764-13718484 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 152, 50

Conread position: 420-703
Cow position: chr1:20543294-20543580 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 421-703
Cow position: chr1:53368280-53368561 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 38, 19

Conread position: 458-710
Cow position: chr1:67913181-67913442 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 18

Conread position: 504-709
Cow position: chr1:30033436-30033637 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 5, 39

Conread position: 517-712
Cow position: chr1:51980153-51980347 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 64

Conread position: 551-711
Cow position: chr1:50764358-50764513 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 76

Show alignments to all cow chromosomes.