Cow genome map

Conread name: Ova1-OVRM10224H10

Conread position: 1-187
Cow position: chr11:58947942-58948133 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 86, 17

Conread position: 1-189
Cow position: chr11:39807229-39807422 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 86, 17

Conread position: 1-216
Cow position: chr11:67445938-67445718 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 87, 17

Conread position: 1-237
Cow position: chr11:2350256-2350501 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 87, 17

Conread position: 1-274
Cow position: chr11:49012757-49012474 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 86, 17

Conread position: 1-279
Cow position: chr11:41744864-41745151 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 86, 17

Conread position: 1-296
Cow position: chr11:41234978-41235282 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-344
Cow position: chr11:25098866-25098510 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-423
Cow position: chr11:30254531-30254955 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 17

Conread position: 1-426
Cow position: chr11:39585418-39584984 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-429
Cow position: chr11:30104889-30104451 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-523
Cow position: chr11:33042422-33041920 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 343
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 16

Conread position: 1-619
Cow position: chr11:2533902-2534531 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr11:4267848-4267139 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 17

Conread position: 1-703
Cow position: chr11:7121660-7120947 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr11:8444682-8443972 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 17

Conread position: 1-703
Cow position: chr11:10699443-10698730 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr11:20731919-20731206 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 17

Conread position: 1-703
Cow position: chr11:32454365-32455070 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr11:32478509-32477796 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr11:35143019-35142316 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 17

Conread position: 1-703
Cow position: chr11:38575179-38574469 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chr11:44154784-44154067 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 17

Conread position: 1-703
Cow position: chr11:57625871-57625174 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 17

Conread position: 1-703
Cow position: chr11:58136022-58136733 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr11:61398310-61397605 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr11:63391172-63390466 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position: chr11:66731450-66732144 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 17

Conread position: 1-703
Cow position: chr11:67452958-67453671 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-712
Cow position: chr11:30201386-30200668 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 23

Conread position: 2-654
Cow position: chr11:72365492-72366155 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 22

Conread position: 5-335
Cow position: chr11:24494161-24494508 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 9-419
Cow position: chr11:65001576-65001998 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 191
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 78, 243

Conread position: 13-712
Cow position: chr11:41177240-41177947 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 54

Conread position: 14-415
Cow position: chr11:27937721-27938124 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 20

Conread position: 14-607
Cow position: chr11:42372138-42372720 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 31

Conread position: 14-627
Cow position: chr11:72312769-72313388 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 215

Conread position: 14-649
Cow position: chr11:30190095-30190716 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 212

Conread position: 14-662
Cow position: chr11:76371747-76371096 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 26

Conread position: 14-683
Cow position: chr11:9080232-9079568 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 100

Conread position: 14-702
Cow position: chr11:35862316-35861639 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 303

Conread position: 14-703
Cow position: chr11:11990301-11991013 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 410

Conread position: 14-703
Cow position: chr11:27659560-27660245 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 111

Conread position: 14-703
Cow position: chr11:40773717-40773054 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 290

Conread position: 14-707
Cow position: chr11:11591297-11592002 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 184

Conread position: 14-707
Cow position: chr11:31864930-31865654 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 339

Conread position: 15-258
Cow position: chr11:52845852-52846104 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 15-335
Cow position: chr11:77235969-77236300 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 25

Conread position: 15-466
Cow position: chr11:47737232-47736767 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 357

Conread position: 15-494
Cow position: chr11:44874787-44875307 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 348
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 62, 52

Conread position: 15-508
Cow position: chr11:17834252-17833758 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 47

Conread position: 15-679
Cow position: chr11:56917690-56917021 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 282

Conread position: 15-703
Cow position: chr11:10958134-10958845 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 199

Conread position: 15-703
Cow position: chr11:17548473-17549174 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 355

Conread position: 15-703
Cow position: chr11:19061761-19061058 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 352

Conread position: 15-703
Cow position: chr11:25564070-25564768 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 35

Conread position: 15-703
Cow position: chr11:27725587-27724885 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 353

Conread position: 15-703
Cow position: chr11:28124828-28125531 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 350

Conread position: 15-703
Cow position: chr11:28227466-28226762 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 348

Conread position: 15-703
Cow position: chr11:40403447-40402755 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 353

Conread position: 15-703
Cow position: chr11:44254388-44255089 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 237

Conread position: 15-703
Cow position: chr11:47973538-47972836 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 352

Conread position: 15-703
Cow position: chr11:49172187-49171482 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 358

Conread position: 15-703
Cow position: chr11:50511359-50510656 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 357

Conread position: 15-703
Cow position: chr11:73799386-73798685 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 358

Conread position: 15-703
Cow position: chr11:84966427-84967124 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 352

Conread position: 18-316
Cow position: chr11:37070031-37069705 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 72, 0

Conread position: 18-390
Cow position: chr11:23882351-23882738 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 350

Conread position: 18-699
Cow position: chr11:43511655-43510963 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 349

Conread position: 18-701
Cow position: chr11:19100167-19099471 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 343

Conread position: 18-701
Cow position: chr11:41168378-41167680 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 344

Conread position: 18-703
Cow position: chr11:10850436-10851130 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 355

Conread position: 18-703
Cow position: chr11:12317755-12317054 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 346

Conread position: 18-703
Cow position: chr11:26122605-26121904 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 359

Conread position: 18-703
Cow position: chr11:29663733-29663038 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 348

Conread position: 18-703
Cow position: chr11:32078463-32077767 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 343

Conread position: 18-703
Cow position: chr11:33602313-33601624 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 355

Conread position: 18-703
Cow position: chr11:38833156-38832463 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 165

Conread position: 18-703
Cow position: chr11:44580913-44580217 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 343

Conread position: 18-703
Cow position: chr11:53429705-53429006 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 348

Conread position: 18-703
Cow position: chr11:58050604-58049911 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 312

Conread position: 18-703
Cow position: chr11:58139026-58139710 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 271

Conread position: 18-703
Cow position: chr11:71331819-71332518 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 52

Conread position: 18-712
Cow position: chr11:85391507-85390831 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 76

Conread position: 19-220
Cow position: chr11:40327330-40327123 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 30, 24

Conread position: 19-642
Cow position: chr11:5387789-5388401 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 294

Conread position: 19-703
Cow position: chr11:25809426-25808734 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 353

Conread position: 20-567
Cow position: chr11:44515455-44514894 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 8

Conread position: 20-703
Cow position: chr11:44516851-44516159 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 8

Conread position: 21-410
Cow position: chr11:14260728-14260327 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 242

Conread position: 21-440
Cow position: chr11:15720406-15719970 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 122

Conread position: 21-503
Cow position: chr11:82146318-82145842 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 113

Conread position: 21-520
Cow position: chr11:15987572-15988081 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 182

Conread position: 21-527
Cow position: chr11:25183384-25183909 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 115

Conread position: 21-615
Cow position: chr11:59600931-59601525 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 29

Conread position: 21-626
Cow position: chr11:8018085-8018704 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 253

Conread position: 21-628
Cow position: chr11:10129429-10128824 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 46

Conread position: 21-638
Cow position: chr11:81339067-81338445 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 266

Conread position: 21-645
Cow position: chr11:9248919-9248293 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 265

Conread position: 21-689
Cow position: chr11:24395653-24396334 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 349

Conread position: 21-703
Cow position: chr11:2834595-2835279 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 165

Conread position: 21-703
Cow position: chr11:12354575-12353876 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 353

Conread position: 21-703
Cow position: chr11:50834439-50833743 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 350

Conread position: 21-703
Cow position: chr11:67296689-67295991 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 346

Conread position: 21-706
Cow position: chr11:26399801-26400500 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 341

Conread position: 21-707
Cow position: chr11:22934270-22933605 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 46

Conread position: 22-508
Cow position: chr11:7228574-7229073 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 350

Conread position: 22-562
Cow position: chr11:15127135-15127686 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 7

Conread position: 22-625
Cow position: chr11:21888107-21887495 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 308

Conread position: 22-703
Cow position: chr11:17280260-17279575 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 272

Conread position: 22-703
Cow position: chr11:54727784-54728473 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 242

Conread position: 22-712
Cow position: chr11:74928122-74928828 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 114

Conread position: 29-344
Cow position: chr11:13087985-13088317 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 30-445
Cow position: chr11:42310128-42309714 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 291
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 58, 87

Conread position: 30-609
Cow position: chr11:66859999-66859413 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 30-622
Cow position: chr11:26785583-26786176 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 260

Conread position: 30-654
Cow position: chr11:28393222-28393844 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 112

Conread position: 30-703
Cow position: chr11:15835249-15835928 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 337

Conread position: 33-703
Cow position: chr11:21897362-21896679 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 285

Conread position: 34-220
Cow position: chr11:8265862-8266058 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 34-703
Cow position: chr11:33000224-33000895 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 195

Conread position: 36-648
Cow position: chr11:27834421-27833794 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 89

Conread position: 36-703
Cow position: chr11:26549817-26550491 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 97

Conread position: 39-406
Cow position: chr11:14735043-14734661 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 331

Conread position: 45-344
Cow position: chr11:41192370-41192054 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 45-344
Cow position: chr11:52421812-52422128 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 45-400
Cow position: chr11:9154844-9154478 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 308

Conread position: 45-432
Cow position: chr11:3790144-3790533 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 15

Conread position: 45-703
Cow position: chr11:35738999-35738328 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 327

Conread position: 46-344
Cow position: chr11:38600593-38600278 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 46-456
Cow position: chr11:72484715-72485130 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 295

Conread position: 46-510
Cow position: chr11:77748124-77748600 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 235

Conread position: 47-703
Cow position: chr11:28693620-28692958 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 156

Conread position: 47-703
Cow position: chr11:64353977-64353306 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 325

Conread position: 49-624
Cow position: chr11:4033083-4032507 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 132

Conread position: 50-590
Cow position: chr11:66945983-66945427 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 133

Conread position: 50-712
Cow position: chr11:17105341-17104671 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 317

Conread position: 68-702
Cow position: chr11:3495409-3496058 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 304

Conread position: 81-586
Cow position: chr11:10215221-10214713 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 39

Conread position: 84-628
Cow position: chr11:18889758-18890275 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 120

Conread position: 86-703
Cow position: chr11:13045344-13044752 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 272

Conread position: 86-703
Cow position: chr11:23494158-23494768 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 282

Conread position: 86-712
Cow position: chr11:60757575-60756948 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 62

Conread position: 87-441
Cow position: chr11:10869892-10870251 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 15, 195

Conread position: 87-602
Cow position: chr11:3229511-3230027 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 275

Conread position: 87-627
Cow position: chr11:19072599-19073132 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 158

Conread position: 87-679
Cow position: chr11:61848340-61847741 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 277

Conread position: 87-703
Cow position: chr11:9707541-9708164 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 277

Conread position: 87-703
Cow position: chr11:35542675-35542052 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 268

Conread position: 87-703
Cow position: chr11:56462754-56463378 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 278

Conread position: 87-703
Cow position: chr11:63653286-63652661 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 271

Conread position: 87-703
Cow position: chr11:63861243-63860627 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 273

Conread position: 87-712
Cow position: chr11:4024948-4024324 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 220

Conread position: 88-408
Cow position: chr11:31531544-31531858 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 193

Conread position: 90-710
Cow position: chr11:31928864-31929469 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 156

Conread position: 101-386
Cow position: chr11:28666943-28667232 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 177

Conread position: 101-653
Cow position: chr11:86578335-86578886 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 255

Conread position: 101-692
Cow position: chr11:7373863-7374448 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 23

Conread position: 101-703
Cow position: chr11:39600453-39599835 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 92

Conread position: 102-406
Cow position: chr11:13049529-13049235 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 168, 23

Conread position: 102-712
Cow position: chr11:49237553-49236943 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 103-701
Cow position: chr11:59871224-59871829 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 263

Conread position: 104-434
Cow position: chr11:84386390-84386063 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 137

Conread position: 104-591
Cow position: chr11:5982543-5983011 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 24

Conread position: 104-704
Cow position: chr11:83284307-83284908 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 184

Conread position: 106-706
Cow position: chr11:60824199-60824791 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 79

Conread position: 107-622
Cow position: chr11:39483702-39484214 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 71

Conread position: 109-703
Cow position: chr11:75403081-75402494 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 169

Conread position: 111-703
Cow position: chr11:40486584-40487169 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 82

Conread position: 112-443
Cow position: chr11:32025297-32025627 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 58

Conread position: 112-647
Cow position: chr11:50949378-50949908 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 203

Conread position: 112-687
Cow position: chr11:41600281-41599688 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 253

Conread position: 113-573
Cow position: chr11:21648031-21648467 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 303
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 15

Conread position: 114-703
Cow position: chr11:38640372-38640966 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 154

Conread position: 120-570
Cow position: chr11:77777591-77777143 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 145

Conread position: 120-703
Cow position: chr11:21729578-21729004 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 179

Conread position: 124-697
Cow position: chr11:11256502-11257078 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 235

Conread position: 129-703
Cow position: chr11:18147109-18146534 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 284

Conread position: 133-703
Cow position: chr11:6342901-6343475 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 228

Conread position: 133-703
Cow position: chr11:7680404-7680977 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 230

Conread position: 138-703
Cow position: chr11:41313741-41314312 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 216

Conread position: 140-440
Cow position: chr11:5280481-5280788 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 11, 223

Conread position: 142-679
Cow position: chr11:79749434-79748890 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 222

Conread position: 142-703
Cow position: chr11:1505547-1504980 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 182

Conread position: 142-703
Cow position: chr11:75511743-75511172 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 212

Conread position: 145-561
Cow position: chr11:56891763-56891346 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 135

Conread position: 145-701
Cow position: chr11:48981747-48982304 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 147-570
Cow position: chr11:38068723-38069149 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 53

Conread position: 148-515
Cow position: chr11:9238560-9238928 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 188

Conread position: 154-703
Cow position: chr11:27922256-27922811 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 199

Conread position: 155-558
Cow position: chr11:21477074-21477478 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 271
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 68, 197

Conread position: 156-502
Cow position: chr11:85731501-85731156 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 97

Conread position: 156-703
Cow position: chr11:2568210-2567667 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 124

Conread position: 161-544
Cow position: chr11:56652987-56652588 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 227

Conread position: 161-622
Cow position: chr11:75553317-75552851 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 304
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 60, 203

Conread position: 161-648
Cow position: chr11:8245633-8246126 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 197

Conread position: 165-569
Cow position: chr11:77747589-77747187 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 188

Conread position: 174-679
Cow position: chr11:60223205-60222694 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 175-468
Cow position: chr11:13063126-13062830 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 15

Conread position: 175-703
Cow position: chr11:67954655-67954110 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 228

Conread position: 178-481
Cow position: chr11:38701858-38702165 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 179
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 40, 16

Conread position: 180-703
Cow position: chr11:48168576-48168057 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 151

Conread position: 184-703
Cow position: chr11:72368544-72369070 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 174

Conread position: 194-510
Cow position: chr11:46781827-46781509 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 199-707
Cow position: chr11:52462790-52463301 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 157

Conread position: 201-626
Cow position: chr11:43992271-43991842 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 288
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 22, 115

Conread position: 201-699
Cow position: chr11:65281532-65282021 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 9

Conread position: 202-703
Cow position: chr11:8266324-8266831 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 78

Conread position: 203-660
Cow position: chr11:14650276-14650744 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 161

Conread position: 222-481
Cow position: chr11:8201198-8200938 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 76, 132

Conread position: 222-578
Cow position: chr11:66739683-66739329 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 28

Conread position: 222-703
Cow position: chr11:1493312-1492832 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 128

Conread position: 222-703
Cow position: chr11:36930998-36930518 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 54

Conread position: 235-578
Cow position: chr11:83287183-83286839 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 15

Conread position: 240-501
Cow position: chr11:12411209-12411474 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 37

Conread position: 240-627
Cow position: chr11:29012776-29013145 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 260
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 61, 36

Conread position: 240-703
Cow position: chr11:30928933-30929398 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 119

Conread position: 243-704
Cow position: chr11:7330144-7330598 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 300
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 59, 110

Conread position: 250-703
Cow position: chr11:29613953-29614408 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 109

Conread position: 250-712
Cow position: chr11:18921022-18920566 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 251-564
Cow position: chr11:53690184-53690484 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 50, 14

Conread position: 251-703
Cow position: chr11:67920763-67920322 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 33

Conread position: 267-453
Cow position: chr11:32402281-32402095 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 31, 87

Conread position: 267-699
Cow position: chr11:81577325-81576897 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 92

Conread position: 267-703
Cow position: chr11:5482866-5482430 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 272-707
Cow position: chr11:39151182-39151619 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 86

Conread position: 276-527
Cow position: chr11:38021889-38021637 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 24, 83

Conread position: 278-711
Cow position: chr11:16230065-16229625 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 89

Conread position: 296-613
Cow position: chr11:46687612-46687914 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 80, 54

Conread position: 300-481
Cow position: chr11:37676816-37676994 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 152, 50

Conread position: 300-570
Cow position: chr11:33688404-33688138 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 152, 55

Conread position: 300-703
Cow position: chr11:41261313-41260912 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 303-703
Cow position: chr11:73513743-73513356 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 46

Conread position: 305-712
Cow position: chr11:8830155-8829748 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 102

Conread position: 305-712
Cow position: chr11:58805196-58804791 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 39

Conread position: 306-703
Cow position: chr11:12177708-12178104 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 49

Conread position: 314-551
Cow position: chr11:9432058-9432289 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 138, 11

Conread position: 314-616
Cow position: chr11:37117703-37117997 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 54

Conread position: 314-703
Cow position: chr11:14260329-14259945 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 36

Conread position: 314-703
Cow position: chr11:26068489-26068101 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 41

Conread position: 314-703
Cow position: chr11:29616666-29616292 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 41

Conread position: 314-703
Cow position: chr11:52846106-52846491 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 41

Conread position: 316-633
Cow position: chr11:42365930-42366245 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 209
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 136, 27

Conread position: 316-706
Cow position: chr11:44106307-44106700 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 39

Conread position: 317-703
Cow position: chr11:2285345-2285729 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 38

Conread position: 321-703
Cow position: chr11:24494172-24493792 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 34

Conread position: 323-712
Cow position: chr11:61426332-61426716 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 26

Conread position: 326-703
Cow position: chr11:28631174-28631549 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 29

Conread position: 333-703
Cow position: chr11:9387984-9388353 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 22

Conread position: 334-703
Cow position: chr11:15995133-15995510 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 21

Conread position: 335-621
Cow position: chr11:28598233-28597956 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 117, 66

Conread position: 350-587
Cow position: chr11:32254615-32254852 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 102, 51

Conread position: 352-703
Cow position: chr11:1667290-1667638 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 50

Conread position: 354-578
Cow position: chr11:72021090-72021316 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 49

Conread position: 355-550
Cow position: chr11:45157044-45156849 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 97, 46

Conread position: 355-703
Cow position: chr11:7719848-7719499 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 56

Conread position: 355-703
Cow position: chr11:22618279-22617930 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-703
Cow position: chr11:32876276-32875927 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-703
Cow position: chr11:37279909-37279564 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 56

Conread position: 355-703
Cow position: chr11:40134141-40133807 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 47

Conread position: 355-703
Cow position: chr11:51033954-51034292 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 46

Conread position: 358-710
Cow position: chr11:49936072-49935719 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 360-507
Cow position: chr11:63617986-63617839 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 41

Conread position: 360-703
Cow position: chr11:40457848-40458192 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 52

Conread position: 362-586
Cow position: chr11:29547492-29547706 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 101, 39

Conread position: 362-703
Cow position: chr11:81067423-81067753 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 40

Conread position: 364-703
Cow position: chr11:3795915-3796251 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 37

Conread position: 367-703
Cow position: chr11:17853773-17854110 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 44

Conread position: 367-703
Cow position: chr11:17980612-17980276 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 34

Conread position: 368-581
Cow position: chr11:55486454-55486667 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 91, 27

Conread position: 368-703
Cow position: chr11:10365709-10365380 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 36

Conread position: 369-703
Cow position: chr11:13087986-13087651 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 42

Conread position: 376-703
Cow position: chr11:25335828-25336155 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 26

Conread position: 382-703
Cow position: chr11:26593084-26592761 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 30

Conread position: 392-592
Cow position: chr11:38842560-38842359 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 60, 18

Conread position: 394-649
Cow position: chr11:75353909-75354166 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 58, 18

Conread position: 394-703
Cow position: chr11:21471339-21471641 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 17

Conread position: 394-703
Cow position: chr11:30056918-30057222 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 178, 53

Conread position: 401-643
Cow position: chr11:27284149-27284393 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 51, 199

Conread position: 417-703
Cow position: chr11:44915958-44915665 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 54

Conread position: 426-703
Cow position: chr11:41229262-41228987 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 97

Conread position: 528-712
Cow position: chr11:5584596-5584414 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 44, 130

Conread position: 543-712
Cow position: chr11:3999634-3999466 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 8

Conread position: 557-712
Cow position: chr11:31487101-31487255 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 15, 49

Show alignments to all cow chromosomes.