Cow genome map
| Conread name: | Ova1-OVRM10224H10 |
| Conread position: | 1-197 |
| Cow position: | chr21:39225292-39225091 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 1-246 |
| Cow position: | chr21:4482065-4482319 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 1-331 |
| Cow position: | chr21:7062901-7062570 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 1-418 |
| Cow position: | chr21:47976776-47977202 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 1-665 |
| Cow position: | chr21:37373993-37374647 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 1-703 |
| Cow position: | chr21:2513615-2514330 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 1-703 |
| Cow position: | chr21:4899199-4898485 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 1-703 |
| Cow position: | chr21:11406114-11405401 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 1-703 |
| Cow position: | chr21:27148785-27148073 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 17 |
| Conread position: | 1-703 |
| Cow position: | chr21:30967175-30966464 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 17 |
| Conread position: | 1-703 |
| Cow position: | chr21:41796954-41796242 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 4-703 |
| Cow position: | chr21:24827351-24826655 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 5 |
| Conread position: | 11-434 |
| Cow position: | chr21:34902058-34901628 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 13-703 |
| Cow position: | chr21:5010698-5009991 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 351 |
| Conread position: | 14-203 |
| Cow position: | chr21:42000-42191 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 74, 98 |
| Conread position: | 14-208 |
| Cow position: | chr21:4284804-4284608 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 80, 11 |
| Conread position: | 14-235 |
| Cow position: | chr21:10235206-10234972 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 14-344 |
| Cow position: | chr21:995657-995325 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 37 |
| Conread position: | 14-579 |
| Cow position: | chr21:46975296-46974739 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 169 |
| Conread position: | 14-692 |
| Cow position: | chr21:13112615-13111930 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 348 |
| Conread position: | 14-701 |
| Cow position: | chr21:26400989-26400292 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 353 |
| Conread position: | 14-703 |
| Cow position: | chr21:44492-45178 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 14-703 |
| Cow position: | chr21:2418975-2419676 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 147 |
| Conread position: | 14-703 |
| Cow position: | chr21:2538373-2537678 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 144 |
| Conread position: | 14-703 |
| Cow position: | chr21:4586922-4586200 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 30 |
| Conread position: | 14-703 |
| Cow position: | chr21:13299617-13300303 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 115 |
| Conread position: | 14-703 |
| Cow position: | chr21:26699888-26699189 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 137 |
| Conread position: | 14-703 |
| Cow position: | chr21:27125948-27125239 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 359 |
| Conread position: | 14-703 |
| Cow position: | chr21:31251773-31252466 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 278 |
| Conread position: | 14-705 |
| Cow position: | chr21:28258448-28259150 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 102 |
| Conread position: | 14-710 |
| Cow position: | chr21:47361392-47360679 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 351 |
| Conread position: | 14-712 |
| Cow position: | chr21:36978137-36977443 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 359 |
| Conread position: | 15-382 |
| Cow position: | chr21:15398197-15397816 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 255 |
| Conread position: | 15-411 |
| Cow position: | chr21:23340901-23340492 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 15-458 |
| Cow position: | chr21:3923040-3923499 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 354 |
| Conread position: | 15-649 |
| Cow position: | chr21:21171532-21170900 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 263 |
| Conread position: | 15-703 |
| Cow position: | chr21:19352084-19351382 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 273 |
| Conread position: | 15-703 |
| Cow position: | chr21:27620719-27620023 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 351 |
| Conread position: | 15-703 |
| Cow position: | chr21:39428179-39428881 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 166 |
| Conread position: | 15-703 |
| Cow position: | chr21:42916570-42917272 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 357 |
| Conread position: | 18-320 |
| Cow position: | chr21:32397269-32396951 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 272 |
| Conread position: | 18-324 |
| Cow position: | chr21:4880652-4880332 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 18-453 |
| Cow position: | chr21:34656738-34657187 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 18-534 |
| Cow position: | chr21:1285472-1284949 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 345 |
| Conread position: | 18-643 |
| Cow position: | chr21:28056096-28056723 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 182 |
| Conread position: | 18-643 |
| Cow position: | chr21:28729421-28730055 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 110 |
| Conread position: | 18-701 |
| Cow position: | chr21:148929-149624 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 349 |
| Conread position: | 18-701 |
| Cow position: | chr21:10853046-10853742 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 191 |
| Conread position: | 18-701 |
| Cow position: | chr21:31513489-31512793 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 153 |
| Conread position: | 18-703 |
| Cow position: | chr21:1195319-1196017 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 269 |
| Conread position: | 18-703 |
| Cow position: | chr21:2879046-2878361 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 211 |
| Conread position: | 18-703 |
| Cow position: | chr21:5019927-5020625 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 41 |
| Conread position: | 18-703 |
| Cow position: | chr21:17143458-17144167 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 408 |
| Conread position: | 18-703 |
| Cow position: | chr21:25189423-25190130 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 353 |
| Conread position: | 18-703 |
| Cow position: | chr21:28916191-28915496 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 354 |
| Conread position: | 18-703 |
| Cow position: | chr21:30596308-30595611 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 353 |
| Conread position: | 18-703 |
| Cow position: | chr21:33256336-33257035 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 353 |
| Conread position: | 18-703 |
| Cow position: | chr21:47648119-47648822 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 354 |
| Conread position: | 21-180 |
| Cow position: | chr21:4733895-4733734 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 21-289 |
| Cow position: | chr21:3252448-3252709 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 80, 62 |
| Conread position: | 21-312 |
| Cow position: | chr21:27286737-27287044 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 21-622 |
| Cow position: | chr21:35390360-35389755 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 199 |
| Conread position: | 21-632 |
| Cow position: | chr21:24298420-24297783 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 21-680 |
| Cow position: | chr21:44763177-44762513 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 344 |
| Conread position: | 21-697 |
| Cow position: | chr21:1766742-1766041 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 146 |
| Conread position: | 21-703 |
| Cow position: | chr21:3781561-3782252 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 38 |
| Conread position: | 21-703 |
| Cow position: | chr21:6966688-6965993 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 117 |
| Conread position: | 21-703 |
| Cow position: | chr21:24083569-24082881 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 168 |
| Conread position: | 21-703 |
| Cow position: | chr21:27066817-27066120 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 351 |
| Conread position: | 21-703 |
| Cow position: | chr21:27429335-27428642 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 153 |
| Conread position: | 21-703 |
| Cow position: | chr21:27608932-27608223 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 365 |
| Conread position: | 21-703 |
| Cow position: | chr21:30564535-30565224 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 352 |
| Conread position: | 21-703 |
| Cow position: | chr21:33317584-33316887 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 351 |
| Conread position: | 21-712 |
| Cow position: | chr21:4078832-4079516 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 65 |
| Conread position: | 21-712 |
| Cow position: | chr21:33998736-33998029 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 127 |
| Conread position: | 24-519 |
| Cow position: | chr21:4566778-4567278 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 338 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 28-630 |
| Cow position: | chr21:30056915-30056298 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 339 |
| Conread position: | 29-662 |
| Cow position: | chr21:47943739-47944397 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 274 |
| Conread position: | 30-666 |
| Cow position: | chr21:6864758-6864118 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 131 |
| Conread position: | 30-703 |
| Cow position: | chr21:36375781-36376469 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 337 |
| Conread position: | 30-712 |
| Cow position: | chr21:2665350-2664677 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 242 |
| Conread position: | 33-654 |
| Cow position: | chr21:35024175-35024792 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 117 |
| Conread position: | 34-703 |
| Cow position: | chr21:26634419-26633751 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 29 |
| Conread position: | 39-592 |
| Cow position: | chr21:38020033-38020575 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 374 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 49, 158 |
| Conread position: | 40-643 |
| Cow position: | chr21:22943618-22944227 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 98 |
| Conread position: | 40-703 |
| Cow position: | chr21:40268586-40267943 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 91 |
| Conread position: | 45-703 |
| Cow position: | chr21:11508745-11509420 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 320 |
| Conread position: | 46-419 |
| Cow position: | chr21:15548097-15547712 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 317 |
| Conread position: | 64-701 |
| Cow position: | chr21:10570112-10570764 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 64-712 |
| Cow position: | chr21:13314284-13314939 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 99 |
| Conread position: | 65-703 |
| Cow position: | chr21:48530002-48530643 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 82-645 |
| Cow position: | chr21:21941698-21941136 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 366 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 87-523 |
| Cow position: | chr21:27523049-27522604 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 57 |
| Conread position: | 87-590 |
| Cow position: | chr21:38026231-38026735 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 270 |
| Conread position: | 87-624 |
| Cow position: | chr21:24948973-24949509 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 202 |
| Conread position: | 87-628 |
| Cow position: | chr21:3172554-3173054 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 352 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 87-703 |
| Cow position: | chr21:39470909-39470285 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 272 |
| Conread position: | 88-364 |
| Cow position: | chr21:37355115-37354834 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 14, 157 |
| Conread position: | 94-703 |
| Cow position: | chr21:7048319-7047703 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 270 |
| Conread position: | 100-413 |
| Cow position: | chr21:13010649-13010961 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 59 |
| Conread position: | 100-693 |
| Cow position: | chr21:13162314-13162901 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 59 |
| Conread position: | 101-637 |
| Cow position: | chr21:16899156-16899705 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 15 |
| Conread position: | 101-712 |
| Cow position: | chr21:4813467-4812850 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 262 |
| Conread position: | 102-344 |
| Cow position: | chr21:23802795-23802543 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 102-345 |
| Cow position: | chr21:4133536-4133788 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 102-632 |
| Cow position: | chr21:32895342-32894813 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 328 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 117, 16 |
| Conread position: | 102-703 |
| Cow position: | chr21:22463060-22463670 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 264 |
| Conread position: | 102-703 |
| Cow position: | chr21:24886528-24887123 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 261 |
| Conread position: | 107-628 |
| Cow position: | chr21:20578501-20577985 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 145 |
| Conread position: | 113-627 |
| Cow position: | chr21:12099432-12099934 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 55 |
| Conread position: | 114-703 |
| Cow position: | chr21:26757845-26757244 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 240 |
| Conread position: | 115-703 |
| Cow position: | chr21:48292459-48291876 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 93 |
| Conread position: | 120-344 |
| Cow position: | chr21:17948163-17948395 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 125-701 |
| Cow position: | chr21:3046230-3046813 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 118 |
| Conread position: | 129-341 |
| Cow position: | chr21:32300009-32300229 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 130-712 |
| Cow position: | chr21:9895268-9895851 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 122 |
| Conread position: | 137-487 |
| Cow position: | chr21:37151227-37151581 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 21, 66 |
| Conread position: | 139-703 |
| Cow position: | chr21:18284715-18285285 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 271 |
| Conread position: | 146-344 |
| Cow position: | chr21:4097516-4097724 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 150-703 |
| Cow position: | chr21:48274277-48273718 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 213 |
| Conread position: | 151-374 |
| Cow position: | chr21:18979724-18979955 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 58, 206 |
| Conread position: | 154-707 |
| Cow position: | chr21:34181173-34180614 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 204 |
| Conread position: | 165-406 |
| Cow position: | chr21:2555665-2555418 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 53, 193 |
| Conread position: | 178-707 |
| Cow position: | chr21:4733581-4733049 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 185 |
| Conread position: | 188-703 |
| Cow position: | chr21:3804821-3804302 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 89 |
| Conread position: | 193-703 |
| Cow position: | chr21:6622789-6623290 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 169 |
| Conread position: | 194-466 |
| Cow position: | chr21:12325045-12325322 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 24, 158 |
| Conread position: | 200-710 |
| Cow position: | chr21:32533786-32534313 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 177 |
| Conread position: | 201-453 |
| Cow position: | chr21:4283555-4283304 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 9, 77 |
| Conread position: | 222-703 |
| Cow position: | chr21:5642840-5642360 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 132 |
| Conread position: | 226-619 |
| Cow position: | chr21:30654575-30654964 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 133 |
| Conread position: | 229-437 |
| Cow position: | chr21:27625330-27625116 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 24, 136 |
| Conread position: | 233-703 |
| Cow position: | chr21:27343391-27342922 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 6 |
| Conread position: | 240-447 |
| Cow position: | chr21:28988070-28988275 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 110 |
| Conread position: | 240-645 |
| Cow position: | chr21:33306997-33307386 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 270 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 60, 113 |
| Conread position: | 240-703 |
| Cow position: | chr21:45790128-45790585 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 62, 126 |
| Conread position: | 250-570 |
| Cow position: | chr21:44862542-44862220 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 89 |
| Conread position: | 251-476 |
| Cow position: | chr21:30777064-30777290 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 49, 103 |
| Conread position: | 253-707 |
| Cow position: | chr21:12152857-12153303 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 256-645 |
| Cow position: | chr21:23501628-23501254 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 45, 92 |
| Conread position: | 258-712 |
| Cow position: | chr21:33420944-33420482 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 96 |
| Conread position: | 267-708 |
| Cow position: | chr21:4560027-4559584 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 300-703 |
| Cow position: | chr21:27287060-27287455 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 55 |
| Conread position: | 300-703 |
| Cow position: | chr21:33710421-33710021 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 49 |
| Conread position: | 300-703 |
| Cow position: | chr21:36535130-36534729 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 55 |
| Conread position: | 300-706 |
| Cow position: | chr21:34823254-34823657 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 53 |
| Conread position: | 301-703 |
| Cow position: | chr21:14726775-14727164 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 52 |
| Conread position: | 304-586 |
| Cow position: | chr21:23784301-23784026 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 154, 42 |
| Conread position: | 307-702 |
| Cow position: | chr21:3252702-3253099 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 35 |
| Conread position: | 314-666 |
| Cow position: | chr21:10042457-10042806 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 41 |
| Conread position: | 316-703 |
| Cow position: | chr21:32396926-32396547 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 39 |
| Conread position: | 321-703 |
| Cow position: | chr21:42817-43181 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 324-638 |
| Cow position: | chr21:21217339-21217038 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 31 |
| Conread position: | 325-712 |
| Cow position: | chr21:37923290-37923670 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 30 |
| Conread position: | 334-711 |
| Cow position: | chr21:22719983-22719609 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 16 |
| Conread position: | 350-703 |
| Cow position: | chr21:33728238-33728586 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 46 |
| Conread position: | 355-550 |
| Cow position: | chr21:39060476-39060282 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 97, 29 |
| Conread position: | 355-619 |
| Cow position: | chr21:7062472-7062207 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 46 |
| Conread position: | 355-703 |
| Cow position: | chr21:16890712-16890361 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 46 |
| Conread position: | 360-550 |
| Cow position: | chr21:16277412-16277600 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 92, 41 |
| Conread position: | 362-703 |
| Cow position: | chr21:30297615-30297958 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 39 |
| Conread position: | 362-708 |
| Cow position: | chr21:47428480-47428826 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 49 |
| Conread position: | 364-708 |
| Cow position: | chr21:449308-449651 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 37 |
| Conread position: | 399-637 |
| Cow position: | chr21:23802257-23802018 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 53, 68 |
| Conread position: | 479-712 |
| Cow position: | chr21:13302450-13302697 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 60, 43 |
| Conread position: | 489-712 |
| Cow position: | chr21:28597856-28598080 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 168 |
| Conread position: | 520-712 |
| Cow position: | chr21:18933908-18934099 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 53, 97 |
Show alignments to all cow chromosomes.