Cow genome map

Conread name: Ova1-OVRM10224H10

Conread position: 1-180
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 17

Conread position: 1-234
Cow position:
Alignm length: 247
Alignm identity: 184
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 86, 17

Conread position: 1-274
Cow position:
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-438
Cow position:
Alignm length: 459
Alignm identity: 305
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 78, 16

Conread position: 1-533
Cow position:
Alignm length: 552
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 18

Conread position: 1-703
Cow position:
Alignm length: 721
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 17

Conread position: 1-703
Cow position:
Alignm length: 718
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-703
Cow position:
Alignm length: 720
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 17

Conread position: 1-706
Cow position:
Alignm length: 723
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 17

Conread position: 3-344
Cow position:
Alignm length: 368
Alignm identity: 252
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 87, 11

Conread position: 9-703
Cow position:
Alignm length: 710
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 79

Conread position: 14-318
Cow position:
Alignm length: 322
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 106

Conread position: 14-485
Cow position:
Alignm length: 493
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 274

Conread position: 14-533
Cow position:
Alignm length: 537
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 320

Conread position: 14-542
Cow position:
Alignm length: 550
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 140

Conread position: 14-703
Cow position:
Alignm length: 708
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 348

Conread position: 14-703
Cow position:
Alignm length: 700
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 20

Conread position: 14-703
Cow position:
Alignm length: 716
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 236

Conread position: 14-703
Cow position:
Alignm length: 706
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 330

Conread position: 14-703
Cow position:
Alignm length: 723
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 417

Conread position: 14-710
Cow position:
Alignm length: 726
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 373

Conread position: 14-710
Cow position:
Alignm length: 710
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 20

Conread position: 15-523
Cow position:
Alignm length: 527
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 49

Conread position: 15-666
Cow position:
Alignm length: 671
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 357

Conread position: 15-703
Cow position:
Alignm length: 716
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 137

Conread position: 15-703
Cow position:
Alignm length: 725
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 369

Conread position: 15-703
Cow position:
Alignm length: 708
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 286

Conread position: 15-703
Cow position:
Alignm length: 714
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 283

Conread position: 15-703
Cow position:
Alignm length: 709
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 357

Conread position: 15-703
Cow position:
Alignm length: 712
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 53

Conread position: 15-703
Cow position:
Alignm length: 708
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 168

Conread position: 16-565
Cow position:
Alignm length: 568
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 351

Conread position: 16-703
Cow position:
Alignm length: 706
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 356

Conread position: 18-374
Cow position:
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 203

Conread position: 18-701
Cow position:
Alignm length: 704
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 349

Conread position: 18-703
Cow position:
Alignm length: 705
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 349

Conread position: 18-703
Cow position:
Alignm length: 705
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 352

Conread position: 18-703
Cow position:
Alignm length: 706
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 353

Conread position: 18-703
Cow position:
Alignm length: 706
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 120

Conread position: 21-218
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 21-218
Cow position:
Alignm length: 207
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 64, 133

Conread position: 21-388
Cow position:
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 86

Conread position: 21-526
Cow position:
Alignm length: 523
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 145

Conread position: 21-536
Cow position:
Alignm length: 529
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 105

Conread position: 21-624
Cow position:
Alignm length: 622
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 218

Conread position: 21-703
Cow position:
Alignm length: 708
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 335

Conread position: 21-708
Cow position:
Alignm length: 718
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 232

Conread position: 28-223
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 30-404
Cow position:
Alignm length: 388
Alignm identity: 268
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 58, 120

Conread position: 30-701
Cow position:
Alignm length: 692
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 352

Conread position: 30-703
Cow position:
Alignm length: 713
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 114

Conread position: 45-274
Cow position:
Alignm length: 243
Alignm identity: 187
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 43, 0

Conread position: 48-538
Cow position:
Alignm length: 509
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 294

Conread position: 53-703
Cow position:
Alignm length: 684
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 89

Conread position: 64-703
Cow position:
Alignm length: 658
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 308

Conread position: 69-627
Cow position:
Alignm length: 577
Alignm identity: 358
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 127, 32

Conread position: 81-703
Cow position:
Alignm length: 631
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 133

Conread position: 87-592
Cow position:
Alignm length: 532
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 194

Conread position: 87-703
Cow position:
Alignm length: 626
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 41

Conread position: 88-706
Cow position:
Alignm length: 631
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 98

Conread position: 89-703
Cow position:
Alignm length: 626
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 45

Conread position: 101-622
Cow position:
Alignm length: 534
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 35

Conread position: 101-707
Cow position:
Alignm length: 619
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 143

Conread position: 102-703
Cow position:
Alignm length: 614
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 25

Conread position: 105-644
Cow position:
Alignm length: 559
Alignm identity: 353
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 114, 28

Conread position: 105-697
Cow position:
Alignm length: 609
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 10

Conread position: 110-703
Cow position:
Alignm length: 604
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 153

Conread position: 120-712
Cow position:
Alignm length: 607
Alignm identity: 369
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 98, 18

Conread position: 126-703
Cow position:
Alignm length: 588
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 142-592
Cow position:
Alignm length: 462
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 125

Conread position: 153-528
Cow position:
Alignm length: 386
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 129

Conread position: 164-630
Cow position:
Alignm length: 482
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 11

Conread position: 174-703
Cow position:
Alignm length: 540
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 94

Conread position: 214-709
Cow position:
Alignm length: 517
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 149

Conread position: 221-709
Cow position:
Alignm length: 497
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 133

Conread position: 222-703
Cow position:
Alignm length: 488
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 137

Conread position: 230-703
Cow position:
Alignm length: 480
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 46

Conread position: 232-565
Cow position:
Alignm length: 341
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 174

Conread position: 233-712
Cow position:
Alignm length: 490
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 118

Conread position: 240-703
Cow position:
Alignm length: 472
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 106

Conread position: 240-708
Cow position:
Alignm length: 477
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 78

Conread position: 241-712
Cow position:
Alignm length: 482
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 35

Conread position: 243-644
Cow position:
Alignm length: 407
Alignm identity: 263
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 75

Conread position: 251-703
Cow position:
Alignm length: 460
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 13

Conread position: 251-703
Cow position:
Alignm length: 459
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 103

Conread position: 253-645
Cow position:
Alignm length: 402
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 106

Conread position: 255-712
Cow position:
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 104

Conread position: 267-703
Cow position:
Alignm length: 443
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 83

Conread position: 277-712
Cow position:
Alignm length: 445
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 82

Conread position: 299-459
Cow position:
Alignm length: 161
Alignm identity: 128
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 300-592
Cow position:
Alignm length: 295
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 300-594
Cow position:
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 300-624
Cow position:
Alignm length: 330
Alignm identity: 213
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 242, 46

Conread position: 302-701
Cow position:
Alignm length: 403
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 44

Conread position: 316-703
Cow position:
Alignm length: 390
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 31

Conread position: 316-703
Cow position:
Alignm length: 391
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 39

Conread position: 324-703
Cow position:
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 22

Conread position: 331-623
Cow position:
Alignm length: 295
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 24

Conread position: 350-627
Cow position:
Alignm length: 280
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 118, 14

Conread position: 352-698
Cow position:
Alignm length: 349
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 50

Conread position: 353-703
Cow position:
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 49

Conread position: 354-666
Cow position:
Alignm length: 315
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 47

Conread position: 355-703
Cow position:
Alignm length: 351
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 42

Conread position: 355-703
Cow position:
Alignm length: 352
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 47

Conread position: 358-703
Cow position:
Alignm length: 360
Alignm identity: 244
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 145, 54

Conread position: 360-529
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 42

Conread position: 360-591
Cow position:
Alignm length: 242
Alignm identity: 174
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 95, 42

Conread position: 362-703
Cow position:
Alignm length: 344
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 364-712
Cow position:
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 37

Conread position: 375-616
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 80, 37

Conread position: 408-587
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 92

Conread position: 417-703
Cow position:
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 421-703
Cow position:
Alignm length: 285
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 53

Conread position: 430-712
Cow position:
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 60

Conread position: 515-712
Cow position:
Alignm length: 199
Alignm identity: 156
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 57, 0

Conread position: 583-712
Cow position:
Alignm length: 130
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.