Cow genome map

Conread name: Ova1-OVRM10224H10

Conread position: 1-181
Cow position: chr26:25189096-25189280 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 17

Conread position: 1-296
Cow position: chr26:4441054-4441358 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-323
Cow position: chr26:2417763-2417428 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-490
Cow position: chr26:3027985-3027486 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-542
Cow position: chr26:1638402-1637853 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-547
Cow position: chr26:4122300-4122856 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr26:1087824-1088529 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr26:8884481-8885188 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 17

Conread position: 1-703
Cow position: chr26:9114668-9115384 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 33

Conread position: 1-703
Cow position: chr26:18856753-18857465 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 17

Conread position: 1-703
Cow position: chr26:34264597-34265309 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-703
Cow position: chr26:35122610-35121897 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 1-712
Cow position: chr26:28707427-28706702 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 17

Conread position: 14-186
Cow position: chr26:4325972-4325793 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 14-379
Cow position: chr26:4601547-4601173 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 183

Conread position: 15-447
Cow position: chr26:367275-367719 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 347

Conread position: 15-661
Cow position: chr26:8654677-8654035 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 29

Conread position: 15-703
Cow position: chr26:1389630-1390327 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 153

Conread position: 15-703
Cow position: chr26:2349529-2348826 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 352

Conread position: 15-703
Cow position: chr26:8872489-8873191 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 322

Conread position: 15-703
Cow position: chr26:12585894-12585193 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 153

Conread position: 15-703
Cow position: chr26:23889054-23889757 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 194

Conread position: 15-712
Cow position: chr26:14488611-14487901 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 352

Conread position: 18-510
Cow position: chr26:19348849-19348348 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 348

Conread position: 18-703
Cow position: chr26:30586700-30586011 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 114

Conread position: 18-711
Cow position: chr26:9841760-9841038 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 266

Conread position: 18-712
Cow position: chr26:17394246-17393539 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 348

Conread position: 20-561
Cow position: chr26:3705293-3705844 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 45

Conread position: 21-264
Cow position: chr26:9483729-9483970 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 197, 66

Conread position: 21-344
Cow position: chr26:1884182-1883837 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 13

Conread position: 21-400
Cow position: chr26:30785423-30785816 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 346

Conread position: 21-510
Cow position: chr26:6844864-6844360 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 49

Conread position: 21-537
Cow position: chr26:8087720-8088244 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 70

Conread position: 21-586
Cow position: chr26:35394420-35393856 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 193

Conread position: 21-645
Cow position: chr26:2605280-2604640 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 332

Conread position: 21-702
Cow position: chr26:35335558-35334868 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 38

Conread position: 21-703
Cow position: chr26:4729675-4728979 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 349

Conread position: 21-703
Cow position: chr26:5679182-5679875 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 226

Conread position: 21-703
Cow position: chr26:6320763-6321450 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 61

Conread position: 21-703
Cow position: chr26:13807378-13806682 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 351

Conread position: 21-703
Cow position: chr26:27987946-27987244 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 330

Conread position: 21-707
Cow position: chr26:2201181-2201879 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 347

Conread position: 28-703
Cow position: chr26:12668107-12668791 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 6

Conread position: 28-706
Cow position: chr26:1347325-1346647 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 264

Conread position: 30-644
Cow position: chr26:33950709-33950084 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 152

Conread position: 36-703
Cow position: chr26:17326825-17327507 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 326

Conread position: 36-712
Cow position: chr26:4752716-4753400 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 336

Conread position: 40-703
Cow position: chr26:4548280-4548956 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 154

Conread position: 45-397
Cow position: chr26:18781867-18781501 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 318

Conread position: 45-528
Cow position: chr26:34271743-34272240 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 327

Conread position: 45-703
Cow position: chr26:18804691-18804025 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 318

Conread position: 52-703
Cow position: chr26:35423179-35423843 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 226

Conread position: 67-703
Cow position: chr26:9559183-9558535 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 209

Conread position: 75-562
Cow position: chr26:23590369-23590859 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 11

Conread position: 84-703
Cow position: chr26:14896723-14897346 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 17

Conread position: 86-712
Cow position: chr26:3699697-3700327 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 30

Conread position: 87-642
Cow position: chr26:21011863-21012404 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 56

Conread position: 94-563
Cow position: chr26:2671045-2670570 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 270

Conread position: 108-649
Cow position: chr26:11289901-11290436 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 241

Conread position: 111-703
Cow position: chr26:21535109-21535708 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 252

Conread position: 114-529
Cow position: chr26:21823881-21823462 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 118

Conread position: 142-703
Cow position: chr26:17429697-17429130 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 221

Conread position: 143-701
Cow position: chr26:3230248-3230811 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 132

Conread position: 153-438
Cow position: chr26:27940925-27941214 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 201

Conread position: 155-661
Cow position: chr26:3754833-3755323 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 85

Conread position: 165-706
Cow position: chr26:18934588-18934044 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 145

Conread position: 168-703
Cow position: chr26:26285667-26286204 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 190

Conread position: 174-406
Cow position: chr26:25189555-25189792 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 44, 75

Conread position: 174-628
Cow position: chr26:35520591-35520126 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 306
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 77

Conread position: 190-712
Cow position: chr26:10699665-10699142 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 185

Conread position: 194-706
Cow position: chr26:1620484-1621002 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 54

Conread position: 201-712
Cow position: chr26:20496373-20496890 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 116

Conread position: 214-703
Cow position: chr26:4324839-4324369 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 64

Conread position: 222-703
Cow position: chr26:13183173-13183655 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 137

Conread position: 235-543
Cow position: chr26:6425905-6426218 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 126

Conread position: 236-712
Cow position: chr26:34014709-34015197 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 124

Conread position: 244-611
Cow position: chr26:31793613-31793979 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 45

Conread position: 244-703
Cow position: chr26:35191663-35191203 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 115

Conread position: 267-703
Cow position: chr26:30594722-30594284 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 87

Conread position: 283-642
Cow position: chr26:12258856-12258498 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 76

Conread position: 300-476
Cow position: chr26:3565134-3564961 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 152, 52

Conread position: 300-703
Cow position: chr26:4440809-4440420 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 53

Conread position: 302-712
Cow position: chr26:31138990-31138590 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 286
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 47, 88

Conread position: 309-468
Cow position: chr26:386652-386808 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 146, 46

Conread position: 313-624
Cow position: chr26:21350466-21350772 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 42

Conread position: 314-626
Cow position: chr26:15891936-15892247 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 30, 43

Conread position: 315-644
Cow position: chr26:19564378-19564052 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 215
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 137, 26

Conread position: 331-580
Cow position: chr26:18773289-18773042 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 24

Conread position: 355-561
Cow position: chr26:3199552-3199346 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 97, 46

Conread position: 355-637
Cow position: chr26:8809876-8810155 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 46

Conread position: 355-698
Cow position: chr26:22660280-22659943 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 46

Conread position: 355-703
Cow position: chr26:3537118-3537467 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-703
Cow position: chr26:35561065-35560716 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 355-704
Cow position: chr26:20186305-20186668 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 47

Conread position: 358-703
Cow position: chr26:1885004-1885358 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 44

Conread position: 360-703
Cow position: chr26:7506712-7506368 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 41

Conread position: 360-703
Cow position: chr26:8083827-8084171 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 41

Conread position: 362-703
Cow position: chr26:22691393-22691735 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 364-712
Cow position: chr26:9100974-9100625 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 39

Conread position: 380-633
Cow position: chr26:4600114-4599854 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 72, 22

Conread position: 388-703
Cow position: chr26:1343264-1342950 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 23

Conread position: 404-706
Cow position: chr26:1614170-1614471 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 11

Conread position: 406-546
Cow position: chr26:16905008-16905150 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.